GO Enrichment Analysis of Co-expressed Genes with
AT3G15115
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 0.00E+00 |
| 3 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 4 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 5 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 6 | GO:0009606: tropism | 0.00E+00 |
| 7 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 8 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 9 | GO:0046620: regulation of organ growth | 6.79E-10 |
| 10 | GO:0009734: auxin-activated signaling pathway | 5.55E-08 |
| 11 | GO:0009926: auxin polar transport | 1.32E-06 |
| 12 | GO:0042793: transcription from plastid promoter | 2.10E-06 |
| 13 | GO:0009733: response to auxin | 9.06E-06 |
| 14 | GO:0010306: rhamnogalacturonan II biosynthetic process | 3.55E-05 |
| 15 | GO:0009913: epidermal cell differentiation | 1.45E-04 |
| 16 | GO:0040008: regulation of growth | 2.81E-04 |
| 17 | GO:0042659: regulation of cell fate specification | 3.14E-04 |
| 18 | GO:0090558: plant epidermis development | 3.14E-04 |
| 19 | GO:1903866: palisade mesophyll development | 3.14E-04 |
| 20 | GO:0010063: positive regulation of trichoblast fate specification | 3.14E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 3.14E-04 |
| 22 | GO:0035987: endodermal cell differentiation | 3.14E-04 |
| 23 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.14E-04 |
| 24 | GO:0015904: tetracycline transport | 3.14E-04 |
| 25 | GO:0007389: pattern specification process | 3.98E-04 |
| 26 | GO:0010583: response to cyclopentenone | 4.63E-04 |
| 27 | GO:0000373: Group II intron splicing | 4.78E-04 |
| 28 | GO:0010252: auxin homeostasis | 5.44E-04 |
| 29 | GO:0009658: chloroplast organization | 6.78E-04 |
| 30 | GO:0010027: thylakoid membrane organization | 6.81E-04 |
| 31 | GO:2000123: positive regulation of stomatal complex development | 6.87E-04 |
| 32 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.87E-04 |
| 33 | GO:0010569: regulation of double-strand break repair via homologous recombination | 6.87E-04 |
| 34 | GO:2000039: regulation of trichome morphogenesis | 6.87E-04 |
| 35 | GO:0018026: peptidyl-lysine monomethylation | 6.87E-04 |
| 36 | GO:0071497: cellular response to freezing | 6.87E-04 |
| 37 | GO:0009662: etioplast organization | 6.87E-04 |
| 38 | GO:1900033: negative regulation of trichome patterning | 6.87E-04 |
| 39 | GO:1904143: positive regulation of carotenoid biosynthetic process | 6.87E-04 |
| 40 | GO:0080009: mRNA methylation | 6.87E-04 |
| 41 | GO:0048481: plant ovule development | 9.50E-04 |
| 42 | GO:0090708: specification of plant organ axis polarity | 1.11E-03 |
| 43 | GO:0090391: granum assembly | 1.11E-03 |
| 44 | GO:0006518: peptide metabolic process | 1.11E-03 |
| 45 | GO:0001578: microtubule bundle formation | 1.11E-03 |
| 46 | GO:0010239: chloroplast mRNA processing | 1.60E-03 |
| 47 | GO:0046739: transport of virus in multicellular host | 1.60E-03 |
| 48 | GO:0051289: protein homotetramerization | 1.60E-03 |
| 49 | GO:0010071: root meristem specification | 1.60E-03 |
| 50 | GO:0051322: anaphase | 2.14E-03 |
| 51 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.14E-03 |
| 52 | GO:0030104: water homeostasis | 2.14E-03 |
| 53 | GO:2000038: regulation of stomatal complex development | 2.14E-03 |
| 54 | GO:0046656: folic acid biosynthetic process | 2.14E-03 |
| 55 | GO:0006021: inositol biosynthetic process | 2.14E-03 |
| 56 | GO:0006346: methylation-dependent chromatin silencing | 2.14E-03 |
| 57 | GO:1901141: regulation of lignin biosynthetic process | 2.14E-03 |
| 58 | GO:0006479: protein methylation | 2.14E-03 |
| 59 | GO:0048629: trichome patterning | 2.14E-03 |
| 60 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.20E-03 |
| 61 | GO:0010375: stomatal complex patterning | 2.74E-03 |
| 62 | GO:0010236: plastoquinone biosynthetic process | 2.74E-03 |
| 63 | GO:0048497: maintenance of floral organ identity | 2.74E-03 |
| 64 | GO:0009107: lipoate biosynthetic process | 2.74E-03 |
| 65 | GO:0007275: multicellular organism development | 2.87E-03 |
| 66 | GO:0048868: pollen tube development | 3.01E-03 |
| 67 | GO:0009741: response to brassinosteroid | 3.01E-03 |
| 68 | GO:0016554: cytidine to uridine editing | 3.38E-03 |
| 69 | GO:0010315: auxin efflux | 3.38E-03 |
| 70 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.38E-03 |
| 71 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.38E-03 |
| 72 | GO:1902456: regulation of stomatal opening | 3.38E-03 |
| 73 | GO:0010405: arabinogalactan protein metabolic process | 3.38E-03 |
| 74 | GO:0048825: cotyledon development | 3.47E-03 |
| 75 | GO:2000067: regulation of root morphogenesis | 4.06E-03 |
| 76 | GO:1901259: chloroplast rRNA processing | 4.06E-03 |
| 77 | GO:0042372: phylloquinone biosynthetic process | 4.06E-03 |
| 78 | GO:0009942: longitudinal axis specification | 4.06E-03 |
| 79 | GO:0046654: tetrahydrofolate biosynthetic process | 4.06E-03 |
| 80 | GO:0030488: tRNA methylation | 4.06E-03 |
| 81 | GO:0009828: plant-type cell wall loosening | 4.50E-03 |
| 82 | GO:0007050: cell cycle arrest | 4.80E-03 |
| 83 | GO:0009772: photosynthetic electron transport in photosystem II | 4.80E-03 |
| 84 | GO:0048437: floral organ development | 4.80E-03 |
| 85 | GO:0009396: folic acid-containing compound biosynthetic process | 4.80E-03 |
| 86 | GO:0015937: coenzyme A biosynthetic process | 4.80E-03 |
| 87 | GO:0030307: positive regulation of cell growth | 4.80E-03 |
| 88 | GO:0010103: stomatal complex morphogenesis | 4.80E-03 |
| 89 | GO:0009416: response to light stimulus | 5.37E-03 |
| 90 | GO:0048766: root hair initiation | 5.57E-03 |
| 91 | GO:0055075: potassium ion homeostasis | 5.57E-03 |
| 92 | GO:0000105: histidine biosynthetic process | 5.57E-03 |
| 93 | GO:0010411: xyloglucan metabolic process | 6.33E-03 |
| 94 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.39E-03 |
| 95 | GO:0009657: plastid organization | 6.39E-03 |
| 96 | GO:0000902: cell morphogenesis | 7.24E-03 |
| 97 | GO:0009638: phototropism | 8.14E-03 |
| 98 | GO:1900865: chloroplast RNA modification | 8.14E-03 |
| 99 | GO:0042761: very long-chain fatty acid biosynthetic process | 8.14E-03 |
| 100 | GO:2000280: regulation of root development | 8.14E-03 |
| 101 | GO:0009451: RNA modification | 8.33E-03 |
| 102 | GO:0006259: DNA metabolic process | 9.07E-03 |
| 103 | GO:0006535: cysteine biosynthetic process from serine | 9.07E-03 |
| 104 | GO:0045036: protein targeting to chloroplast | 9.07E-03 |
| 105 | GO:0010015: root morphogenesis | 1.00E-02 |
| 106 | GO:0006265: DNA topological change | 1.00E-02 |
| 107 | GO:0006790: sulfur compound metabolic process | 1.11E-02 |
| 108 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.11E-02 |
| 109 | GO:0045037: protein import into chloroplast stroma | 1.11E-02 |
| 110 | GO:0042546: cell wall biogenesis | 1.20E-02 |
| 111 | GO:0009767: photosynthetic electron transport chain | 1.21E-02 |
| 112 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.21E-02 |
| 113 | GO:2000012: regulation of auxin polar transport | 1.21E-02 |
| 114 | GO:0009785: blue light signaling pathway | 1.21E-02 |
| 115 | GO:0009691: cytokinin biosynthetic process | 1.21E-02 |
| 116 | GO:0009826: unidimensional cell growth | 1.34E-02 |
| 117 | GO:0080188: RNA-directed DNA methylation | 1.43E-02 |
| 118 | GO:0090351: seedling development | 1.43E-02 |
| 119 | GO:0046854: phosphatidylinositol phosphorylation | 1.43E-02 |
| 120 | GO:0009664: plant-type cell wall organization | 1.45E-02 |
| 121 | GO:0006833: water transport | 1.54E-02 |
| 122 | GO:0009860: pollen tube growth | 1.55E-02 |
| 123 | GO:0019344: cysteine biosynthetic process | 1.66E-02 |
| 124 | GO:0080147: root hair cell development | 1.66E-02 |
| 125 | GO:0051302: regulation of cell division | 1.78E-02 |
| 126 | GO:0019953: sexual reproduction | 1.78E-02 |
| 127 | GO:0006418: tRNA aminoacylation for protein translation | 1.78E-02 |
| 128 | GO:0010073: meristem maintenance | 1.78E-02 |
| 129 | GO:0006306: DNA methylation | 1.91E-02 |
| 130 | GO:0016998: cell wall macromolecule catabolic process | 1.91E-02 |
| 131 | GO:0031348: negative regulation of defense response | 2.03E-02 |
| 132 | GO:0010082: regulation of root meristem growth | 2.16E-02 |
| 133 | GO:0042127: regulation of cell proliferation | 2.29E-02 |
| 134 | GO:0009742: brassinosteroid mediated signaling pathway | 2.35E-02 |
| 135 | GO:0000226: microtubule cytoskeleton organization | 2.57E-02 |
| 136 | GO:0008033: tRNA processing | 2.57E-02 |
| 137 | GO:0010118: stomatal movement | 2.57E-02 |
| 138 | GO:0009958: positive gravitropism | 2.71E-02 |
| 139 | GO:0010305: leaf vascular tissue pattern formation | 2.71E-02 |
| 140 | GO:0006662: glycerol ether metabolic process | 2.71E-02 |
| 141 | GO:0006457: protein folding | 2.75E-02 |
| 142 | GO:0007059: chromosome segregation | 2.85E-02 |
| 143 | GO:0009646: response to absence of light | 2.85E-02 |
| 144 | GO:0048544: recognition of pollen | 2.85E-02 |
| 145 | GO:0007018: microtubule-based movement | 2.85E-02 |
| 146 | GO:0009845: seed germination | 3.00E-02 |
| 147 | GO:0008654: phospholipid biosynthetic process | 3.00E-02 |
| 148 | GO:0009851: auxin biosynthetic process | 3.00E-02 |
| 149 | GO:0080156: mitochondrial mRNA modification | 3.15E-02 |
| 150 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.15E-02 |
| 151 | GO:0071554: cell wall organization or biogenesis | 3.15E-02 |
| 152 | GO:0031047: gene silencing by RNA | 3.30E-02 |
| 153 | GO:0019761: glucosinolate biosynthetic process | 3.30E-02 |
| 154 | GO:0032502: developmental process | 3.30E-02 |
| 155 | GO:0009630: gravitropism | 3.30E-02 |
| 156 | GO:1901657: glycosyl compound metabolic process | 3.45E-02 |
| 157 | GO:0006464: cellular protein modification process | 3.61E-02 |
| 158 | GO:0005975: carbohydrate metabolic process | 3.67E-02 |
| 159 | GO:0007267: cell-cell signaling | 3.77E-02 |
| 160 | GO:0000910: cytokinesis | 3.92E-02 |
| 161 | GO:0001666: response to hypoxia | 4.09E-02 |
| 162 | GO:0006974: cellular response to DNA damage stimulus | 4.42E-02 |
| 163 | GO:0006508: proteolysis | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
| 2 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 3 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 6 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 7 | GO:0004632: phosphopantothenate--cysteine ligase activity | 3.14E-04 |
| 8 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 3.14E-04 |
| 9 | GO:0004156: dihydropteroate synthase activity | 3.14E-04 |
| 10 | GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | 3.14E-04 |
| 11 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.14E-04 |
| 12 | GO:0052381: tRNA dimethylallyltransferase activity | 3.14E-04 |
| 13 | GO:0016274: protein-arginine N-methyltransferase activity | 3.14E-04 |
| 14 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.14E-04 |
| 15 | GO:0004830: tryptophan-tRNA ligase activity | 3.14E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.14E-04 |
| 17 | GO:0004016: adenylate cyclase activity | 3.14E-04 |
| 18 | GO:0009672: auxin:proton symporter activity | 5.66E-04 |
| 19 | GO:0016415: octanoyltransferase activity | 6.87E-04 |
| 20 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.87E-04 |
| 21 | GO:0000774: adenyl-nucleotide exchange factor activity | 6.87E-04 |
| 22 | GO:0008805: carbon-monoxide oxygenase activity | 6.87E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.87E-04 |
| 24 | GO:0008493: tetracycline transporter activity | 6.87E-04 |
| 25 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.87E-04 |
| 26 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 6.87E-04 |
| 27 | GO:0017118: lipoyltransferase activity | 6.87E-04 |
| 28 | GO:0010329: auxin efflux transmembrane transporter activity | 9.84E-04 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 1.11E-03 |
| 30 | GO:0016805: dipeptidase activity | 1.11E-03 |
| 31 | GO:0001872: (1->3)-beta-D-glucan binding | 1.60E-03 |
| 32 | GO:0009041: uridylate kinase activity | 1.60E-03 |
| 33 | GO:0004930: G-protein coupled receptor activity | 2.14E-03 |
| 34 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.14E-03 |
| 35 | GO:0004659: prenyltransferase activity | 2.14E-03 |
| 36 | GO:0016279: protein-lysine N-methyltransferase activity | 2.14E-03 |
| 37 | GO:0004519: endonuclease activity | 2.27E-03 |
| 38 | GO:0004523: RNA-DNA hybrid ribonuclease activity | 2.74E-03 |
| 39 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.74E-03 |
| 40 | GO:0004888: transmembrane signaling receptor activity | 2.74E-03 |
| 41 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 2.74E-03 |
| 42 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.38E-03 |
| 43 | GO:0080030: methyl indole-3-acetate esterase activity | 3.38E-03 |
| 44 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.38E-03 |
| 45 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.72E-03 |
| 46 | GO:0004518: nuclease activity | 3.97E-03 |
| 47 | GO:0004124: cysteine synthase activity | 4.06E-03 |
| 48 | GO:0008195: phosphatidate phosphatase activity | 4.06E-03 |
| 49 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.06E-03 |
| 50 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.06E-03 |
| 51 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.06E-03 |
| 52 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 5.74E-03 |
| 53 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.33E-03 |
| 54 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 6.39E-03 |
| 55 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 6.76E-03 |
| 56 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.71E-03 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.90E-03 |
| 58 | GO:0003725: double-stranded RNA binding | 1.21E-02 |
| 59 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.21E-02 |
| 60 | GO:0031072: heat shock protein binding | 1.21E-02 |
| 61 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.32E-02 |
| 62 | GO:0003723: RNA binding | 1.44E-02 |
| 63 | GO:0016788: hydrolase activity, acting on ester bonds | 1.45E-02 |
| 64 | GO:0031418: L-ascorbic acid binding | 1.66E-02 |
| 65 | GO:0051087: chaperone binding | 1.78E-02 |
| 66 | GO:0004707: MAP kinase activity | 1.91E-02 |
| 67 | GO:0008408: 3'-5' exonuclease activity | 1.91E-02 |
| 68 | GO:0004650: polygalacturonase activity | 2.02E-02 |
| 69 | GO:0051082: unfolded protein binding | 2.22E-02 |
| 70 | GO:0004812: aminoacyl-tRNA ligase activity | 2.43E-02 |
| 71 | GO:0047134: protein-disulfide reductase activity | 2.43E-02 |
| 72 | GO:0001085: RNA polymerase II transcription factor binding | 2.71E-02 |
| 73 | GO:0004527: exonuclease activity | 2.71E-02 |
| 74 | GO:0004791: thioredoxin-disulfide reductase activity | 2.85E-02 |
| 75 | GO:0019901: protein kinase binding | 3.00E-02 |
| 76 | GO:0000156: phosphorelay response regulator activity | 3.45E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.45E-02 |
| 78 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.77E-02 |
| 79 | GO:0008237: metallopeptidase activity | 3.77E-02 |
| 80 | GO:0005200: structural constituent of cytoskeleton | 3.77E-02 |
| 81 | GO:0016413: O-acetyltransferase activity | 3.92E-02 |
| 82 | GO:0051213: dioxygenase activity | 4.09E-02 |
| 83 | GO:0046872: metal ion binding | 4.20E-02 |
| 84 | GO:0102483: scopolin beta-glucosidase activity | 4.59E-02 |
| 85 | GO:0030247: polysaccharide binding | 4.59E-02 |