Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14760

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090615: mitochondrial mRNA processing0.00E+00
2GO:0031222: arabinan catabolic process0.00E+00
3GO:0042794: rRNA transcription from plastid promoter0.00E+00
4GO:0046719: regulation by virus of viral protein levels in host cell0.00E+00
5GO:0045014: negative regulation of transcription by glucose0.00E+00
6GO:0000819: sister chromatid segregation0.00E+00
7GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
8GO:0009606: tropism0.00E+00
9GO:0035884: arabinan biosynthetic process0.00E+00
10GO:0097164: ammonium ion metabolic process0.00E+00
11GO:0090322: regulation of superoxide metabolic process0.00E+00
12GO:0045184: establishment of protein localization0.00E+00
13GO:1903224: regulation of endodermal cell differentiation0.00E+00
14GO:0044774: mitotic DNA integrity checkpoint0.00E+00
15GO:0042793: transcription from plastid promoter3.12E-06
16GO:0010583: response to cyclopentenone5.56E-05
17GO:0048229: gametophyte development5.58E-05
18GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.40E-05
19GO:2000038: regulation of stomatal complex development8.19E-05
20GO:0009416: response to light stimulus1.61E-04
21GO:0009658: chloroplast organization2.08E-04
22GO:0042127: regulation of cell proliferation3.15E-04
23GO:0000082: G1/S transition of mitotic cell cycle3.23E-04
24GO:0006955: immune response3.23E-04
25GO:0048437: floral organ development3.23E-04
26GO:0010063: positive regulation of trichoblast fate specification3.65E-04
27GO:0010480: microsporocyte differentiation3.65E-04
28GO:0090063: positive regulation of microtubule nucleation3.65E-04
29GO:0042759: long-chain fatty acid biosynthetic process3.65E-04
30GO:0033206: meiotic cytokinesis3.65E-04
31GO:0035987: endodermal cell differentiation3.65E-04
32GO:0006436: tryptophanyl-tRNA aminoacylation3.65E-04
33GO:0034757: negative regulation of iron ion transport3.65E-04
34GO:0042659: regulation of cell fate specification3.65E-04
35GO:0080112: seed growth3.65E-04
36GO:1905039: carboxylic acid transmembrane transport3.65E-04
37GO:1905200: gibberellic acid transmembrane transport3.65E-04
38GO:0090558: plant epidermis development3.65E-04
39GO:1903866: palisade mesophyll development3.65E-04
40GO:0009662: etioplast organization7.94E-04
41GO:1904143: positive regulation of carotenoid biosynthetic process7.94E-04
42GO:0080009: mRNA methylation7.94E-04
43GO:0006529: asparagine biosynthetic process7.94E-04
44GO:2000123: positive regulation of stomatal complex development7.94E-04
45GO:0000086: G2/M transition of mitotic cell cycle7.94E-04
46GO:0033566: gamma-tubulin complex localization7.94E-04
47GO:1902326: positive regulation of chlorophyll biosynthetic process7.94E-04
48GO:0010569: regulation of double-strand break repair via homologous recombination7.94E-04
49GO:0070981: L-asparagine biosynthetic process7.94E-04
50GO:0010271: regulation of chlorophyll catabolic process7.94E-04
51GO:0018026: peptidyl-lysine monomethylation7.94E-04
52GO:0048481: plant ovule development1.25E-03
53GO:0001578: microtubule bundle formation1.29E-03
54GO:0090708: specification of plant organ axis polarity1.29E-03
55GO:0080117: secondary growth1.29E-03
56GO:0090391: granum assembly1.29E-03
57GO:0006518: peptide metabolic process1.29E-03
58GO:0048366: leaf development1.34E-03
59GO:0009934: regulation of meristem structural organization1.37E-03
60GO:0009734: auxin-activated signaling pathway1.45E-03
61GO:0009558: embryo sac cellularization1.85E-03
62GO:0010371: regulation of gibberellin biosynthetic process1.85E-03
63GO:1902476: chloride transmembrane transport1.85E-03
64GO:0010071: root meristem specification1.85E-03
65GO:0010239: chloroplast mRNA processing1.85E-03
66GO:0009800: cinnamic acid biosynthetic process1.85E-03
67GO:0016572: histone phosphorylation1.85E-03
68GO:0046739: transport of virus in multicellular host1.85E-03
69GO:0016998: cell wall macromolecule catabolic process2.30E-03
70GO:0009755: hormone-mediated signaling pathway2.49E-03
71GO:0006479: protein methylation2.49E-03
72GO:0051322: anaphase2.49E-03
73GO:0030104: water homeostasis2.49E-03
74GO:0006221: pyrimidine nucleotide biosynthetic process2.49E-03
75GO:0009739: response to gibberellin2.70E-03
76GO:0006351: transcription, DNA-templated2.92E-03
77GO:0048497: maintenance of floral organ identity3.18E-03
78GO:1902183: regulation of shoot apical meristem development3.18E-03
79GO:0010438: cellular response to sulfur starvation3.18E-03
80GO:0032876: negative regulation of DNA endoreduplication3.18E-03
81GO:0030308: negative regulation of cell growth3.18E-03
82GO:0010375: stomatal complex patterning3.18E-03
83GO:0009741: response to brassinosteroid3.76E-03
84GO:0009733: response to auxin3.92E-03
85GO:0009643: photosynthetic acclimation3.93E-03
86GO:0010304: PSII associated light-harvesting complex II catabolic process3.93E-03
87GO:0010389: regulation of G2/M transition of mitotic cell cycle3.93E-03
88GO:0009913: epidermal cell differentiation3.93E-03
89GO:0016554: cytidine to uridine editing3.93E-03
90GO:0042176: regulation of protein catabolic process3.93E-03
91GO:0048831: regulation of shoot system development3.93E-03
92GO:0010315: auxin efflux3.93E-03
93GO:0006559: L-phenylalanine catabolic process3.93E-03
94GO:0007018: microtubule-based movement4.05E-03
95GO:0009646: response to absence of light4.05E-03
96GO:0080156: mitochondrial mRNA modification4.65E-03
97GO:0048509: regulation of meristem development4.74E-03
98GO:2000037: regulation of stomatal complex patterning4.74E-03
99GO:0010310: regulation of hydrogen peroxide metabolic process4.74E-03
100GO:2000067: regulation of root morphogenesis4.74E-03
101GO:0009955: adaxial/abaxial pattern specification4.74E-03
102GO:0010067: procambium histogenesis4.74E-03
103GO:2000033: regulation of seed dormancy process4.74E-03
104GO:1901259: chloroplast rRNA processing4.74E-03
105GO:0032502: developmental process4.96E-03
106GO:0010103: stomatal complex morphogenesis5.60E-03
107GO:0000712: resolution of meiotic recombination intermediates5.60E-03
108GO:0006821: chloride transport5.60E-03
109GO:0010444: guard mother cell differentiation5.60E-03
110GO:0009828: plant-type cell wall loosening5.63E-03
111GO:0000910: cytokinesis6.35E-03
112GO:0055075: potassium ion homeostasis6.51E-03
113GO:0052543: callose deposition in cell wall6.51E-03
114GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.51E-03
115GO:0010439: regulation of glucosinolate biosynthetic process6.51E-03
116GO:0001522: pseudouridine synthesis6.51E-03
117GO:0009642: response to light intensity6.51E-03
118GO:0042255: ribosome assembly6.51E-03
119GO:0006353: DNA-templated transcription, termination6.51E-03
120GO:0048766: root hair initiation6.51E-03
121GO:0010027: thylakoid membrane organization6.72E-03
122GO:0010029: regulation of seed germination7.11E-03
123GO:0007389: pattern specification process7.47E-03
124GO:0010497: plasmodesmata-mediated intercellular transport7.47E-03
125GO:0048574: long-day photoperiodism, flowering7.47E-03
126GO:0000373: Group II intron splicing8.47E-03
127GO:0048589: developmental growth8.47E-03
128GO:0000902: cell morphogenesis8.47E-03
129GO:2000024: regulation of leaf development8.47E-03
130GO:0000160: phosphorelay signal transduction system9.24E-03
131GO:0042761: very long-chain fatty acid biosynthetic process9.53E-03
132GO:2000280: regulation of root development9.53E-03
133GO:0006349: regulation of gene expression by genetic imprinting9.53E-03
134GO:1900865: chloroplast RNA modification9.53E-03
135GO:0048829: root cap development1.06E-02
136GO:0006949: syncytium formation1.06E-02
137GO:0006259: DNA metabolic process1.06E-02
138GO:0010048: vernalization response1.06E-02
139GO:0006535: cysteine biosynthetic process from serine1.06E-02
140GO:0009451: RNA modification1.11E-02
141GO:0006355: regulation of transcription, DNA-templated1.12E-02
142GO:1903507: negative regulation of nucleic acid-templated transcription1.18E-02
143GO:0009750: response to fructose1.18E-02
144GO:0006265: DNA topological change1.18E-02
145GO:0009089: lysine biosynthetic process via diaminopimelate1.18E-02
146GO:0009682: induced systemic resistance1.18E-02
147GO:0008285: negative regulation of cell proliferation1.18E-02
148GO:0015770: sucrose transport1.18E-02
149GO:0030001: metal ion transport1.27E-02
150GO:0008361: regulation of cell size1.30E-02
151GO:0006312: mitotic recombination1.30E-02
152GO:0012501: programmed cell death1.30E-02
153GO:0010152: pollen maturation1.30E-02
154GO:0008380: RNA splicing1.35E-02
155GO:0010075: regulation of meristem growth1.42E-02
156GO:0010588: cotyledon vascular tissue pattern formation1.42E-02
157GO:0010102: lateral root morphogenesis1.42E-02
158GO:0009744: response to sucrose1.44E-02
159GO:0010223: secondary shoot formation1.55E-02
160GO:0006541: glutamine metabolic process1.55E-02
161GO:0010020: chloroplast fission1.55E-02
162GO:0080188: RNA-directed DNA methylation1.68E-02
163GO:0009901: anther dehiscence1.68E-02
164GO:0009664: plant-type cell wall organization1.81E-02
165GO:0006071: glycerol metabolic process1.81E-02
166GO:0006833: water transport1.81E-02
167GO:0042538: hyperosmotic salinity response1.81E-02
168GO:0010025: wax biosynthetic process1.81E-02
169GO:2000377: regulation of reactive oxygen species metabolic process1.95E-02
170GO:0019344: cysteine biosynthetic process1.95E-02
171GO:0009944: polarity specification of adaxial/abaxial axis1.95E-02
172GO:0000027: ribosomal large subunit assembly1.95E-02
173GO:0009863: salicylic acid mediated signaling pathway1.95E-02
174GO:0009736: cytokinin-activated signaling pathway1.95E-02
175GO:0010187: negative regulation of seed germination1.95E-02
176GO:0010073: meristem maintenance2.09E-02
177GO:0051302: regulation of cell division2.09E-02
178GO:0006418: tRNA aminoacylation for protein translation2.09E-02
179GO:0003333: amino acid transmembrane transport2.24E-02
180GO:0010431: seed maturation2.24E-02
181GO:0048367: shoot system development2.38E-02
182GO:2000022: regulation of jasmonic acid mediated signaling pathway2.38E-02
183GO:0048316: seed development2.38E-02
184GO:0006468: protein phosphorylation2.52E-02
185GO:0001944: vasculature development2.54E-02
186GO:0009625: response to insect2.54E-02
187GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.54E-02
188GO:0071215: cellular response to abscisic acid stimulus2.54E-02
189GO:0010082: regulation of root meristem growth2.54E-02
190GO:0009740: gibberellic acid mediated signaling pathway2.62E-02
191GO:0010089: xylem development2.69E-02
192GO:0048443: stamen development2.69E-02
193GO:0006284: base-excision repair2.69E-02
194GO:0070417: cellular response to cold2.85E-02
195GO:0008284: positive regulation of cell proliferation2.85E-02
196GO:0009742: brassinosteroid mediated signaling pathway2.94E-02
197GO:0010087: phloem or xylem histogenesis3.01E-02
198GO:0048653: anther development3.01E-02
199GO:0042631: cellular response to water deprivation3.01E-02
200GO:0000226: microtubule cytoskeleton organization3.01E-02
201GO:0030154: cell differentiation3.08E-02
202GO:0045892: negative regulation of transcription, DNA-templated3.14E-02
203GO:0009960: endosperm development3.18E-02
204GO:0009958: positive gravitropism3.18E-02
205GO:0010305: leaf vascular tissue pattern formation3.18E-02
206GO:0007059: chromosome segregation3.35E-02
207GO:0048825: cotyledon development3.52E-02
208GO:0009749: response to glucose3.52E-02
209GO:0009058: biosynthetic process3.66E-02
210GO:0009630: gravitropism3.87E-02
211GO:0010090: trichome morphogenesis4.05E-02
212GO:0009790: embryo development4.05E-02
213GO:0030163: protein catabolic process4.05E-02
214GO:0048364: root development4.20E-02
215GO:0010252: auxin homeostasis4.23E-02
216GO:0007267: cell-cell signaling4.42E-02
217GO:0071805: potassium ion transmembrane transport4.42E-02
218GO:0040008: regulation of growth4.56E-02
219GO:0045490: pectin catabolic process4.78E-02
220GO:0001666: response to hypoxia4.80E-02
RankGO TermAdjusted P value
1GO:0042834: peptidoglycan binding0.00E+00
2GO:0003727: single-stranded RNA binding3.15E-04
3GO:0004830: tryptophan-tRNA ligase activity3.65E-04
4GO:0004016: adenylate cyclase activity3.65E-04
5GO:1905201: gibberellin transmembrane transporter activity3.65E-04
6GO:0008836: diaminopimelate decarboxylase activity3.65E-04
7GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity3.65E-04
8GO:0016274: protein-arginine N-methyltransferase activity3.65E-04
9GO:0004071: aspartate-ammonia ligase activity3.65E-04
10GO:0003777: microtubule motor activity6.77E-04
11GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity7.94E-04
12GO:0008805: carbon-monoxide oxygenase activity7.94E-04
13GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity7.94E-04
14GO:0009884: cytokinin receptor activity7.94E-04
15GO:0003723: RNA binding1.08E-03
16GO:0009982: pseudouridine synthase activity1.22E-03
17GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.29E-03
18GO:0016805: dipeptidase activity1.29E-03
19GO:0005034: osmosensor activity1.29E-03
20GO:0017150: tRNA dihydrouridine synthase activity1.29E-03
21GO:0045548: phenylalanine ammonia-lyase activity1.29E-03
22GO:0001872: (1->3)-beta-D-glucan binding1.85E-03
23GO:0009041: uridylate kinase activity1.85E-03
24GO:0003916: DNA topoisomerase activity1.85E-03
25GO:0046556: alpha-L-arabinofuranosidase activity2.49E-03
26GO:0016279: protein-lysine N-methyltransferase activity2.49E-03
27GO:0010011: auxin binding2.49E-03
28GO:0005253: anion channel activity2.49E-03
29GO:0030570: pectate lyase activity2.74E-03
30GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.18E-03
31GO:0008725: DNA-3-methyladenine glycosylase activity3.18E-03
32GO:0004519: endonuclease activity3.37E-03
33GO:0001085: RNA polymerase II transcription factor binding3.76E-03
34GO:0005247: voltage-gated chloride channel activity3.93E-03
35GO:0030332: cyclin binding3.93E-03
36GO:0019900: kinase binding4.74E-03
37GO:0004124: cysteine synthase activity4.74E-03
38GO:0016832: aldehyde-lyase activity4.74E-03
39GO:0008237: metallopeptidase activity5.99E-03
40GO:0019843: rRNA binding7.14E-03
41GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity7.47E-03
42GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity7.47E-03
43GO:0004674: protein serine/threonine kinase activity7.80E-03
44GO:0008889: glycerophosphodiester phosphodiesterase activity8.47E-03
45GO:0000989: transcription factor activity, transcription factor binding8.47E-03
46GO:0005515: protein binding9.15E-03
47GO:0009672: auxin:proton symporter activity9.53E-03
48GO:0004222: metalloendopeptidase activity9.70E-03
49GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.02E-02
50GO:0004673: protein histidine kinase activity1.06E-02
51GO:0008017: microtubule binding1.14E-02
52GO:0008515: sucrose transmembrane transporter activity1.18E-02
53GO:0005089: Rho guanyl-nucleotide exchange factor activity1.18E-02
54GO:0031072: heat shock protein binding1.42E-02
55GO:0000155: phosphorelay sensor kinase activity1.42E-02
56GO:0003725: double-stranded RNA binding1.42E-02
57GO:0010329: auxin efflux transmembrane transporter activity1.42E-02
58GO:0004022: alcohol dehydrogenase (NAD) activity1.42E-02
59GO:0004190: aspartic-type endopeptidase activity1.68E-02
60GO:0051119: sugar transmembrane transporter activity1.68E-02
61GO:0005524: ATP binding1.78E-02
62GO:0003714: transcription corepressor activity1.95E-02
63GO:0043424: protein histidine kinase binding2.09E-02
64GO:0005345: purine nucleobase transmembrane transporter activity2.09E-02
65GO:0015079: potassium ion transmembrane transporter activity2.09E-02
66GO:0019706: protein-cysteine S-palmitoyltransferase activity2.24E-02
67GO:0008094: DNA-dependent ATPase activity2.24E-02
68GO:0004176: ATP-dependent peptidase activity2.24E-02
69GO:0033612: receptor serine/threonine kinase binding2.24E-02
70GO:0003700: transcription factor activity, sequence-specific DNA binding2.46E-02
71GO:0004650: polygalacturonase activity2.54E-02
72GO:0004812: aminoacyl-tRNA ligase activity2.85E-02
73GO:0018024: histone-lysine N-methyltransferase activity2.85E-02
74GO:0005215: transporter activity3.16E-02
75GO:0003713: transcription coactivator activity3.18E-02
76GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.18E-02
77GO:0042803: protein homodimerization activity3.26E-02
78GO:0004871: signal transducer activity3.26E-02
79GO:0019901: protein kinase binding3.52E-02
80GO:0016762: xyloglucan:xyloglucosyl transferase activity3.69E-02
81GO:0016829: lyase activity3.76E-02
82GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.93E-02
83GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.95E-02
84GO:0000156: phosphorelay response regulator activity4.05E-02
85GO:0016759: cellulose synthase activity4.23E-02
86GO:0003677: DNA binding4.34E-02
87GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.42E-02
88GO:0046872: metal ion binding4.98E-02
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Gene type



Gene DE type





AT1G74670