GO Enrichment Analysis of Co-expressed Genes with
AT3G14390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 2 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 3 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 4 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 5 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 6 | GO:1901333: positive regulation of lateral root development | 0.00E+00 |
| 7 | GO:0042793: transcription from plastid promoter | 2.58E-10 |
| 8 | GO:0009451: RNA modification | 7.78E-06 |
| 9 | GO:0009658: chloroplast organization | 2.13E-05 |
| 10 | GO:0006955: immune response | 4.01E-05 |
| 11 | GO:0050891: multicellular organismal water homeostasis | 9.50E-05 |
| 12 | GO:0034757: negative regulation of iron ion transport | 9.50E-05 |
| 13 | GO:1903866: palisade mesophyll development | 9.50E-05 |
| 14 | GO:0010376: stomatal complex formation | 9.50E-05 |
| 15 | GO:0010480: microsporocyte differentiation | 9.50E-05 |
| 16 | GO:0090063: positive regulation of microtubule nucleation | 9.50E-05 |
| 17 | GO:0043609: regulation of carbon utilization | 9.50E-05 |
| 18 | GO:0048229: gametophyte development | 1.41E-04 |
| 19 | GO:0061087: positive regulation of histone H3-K27 methylation | 2.24E-04 |
| 20 | GO:0010254: nectary development | 2.24E-04 |
| 21 | GO:0033566: gamma-tubulin complex localization | 2.24E-04 |
| 22 | GO:0009967: positive regulation of signal transduction | 2.24E-04 |
| 23 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.24E-04 |
| 24 | GO:0010434: bract formation | 2.24E-04 |
| 25 | GO:0010235: guard mother cell cytokinesis | 2.24E-04 |
| 26 | GO:0048439: flower morphogenesis | 2.24E-04 |
| 27 | GO:0009629: response to gravity | 2.24E-04 |
| 28 | GO:0010271: regulation of chlorophyll catabolic process | 2.24E-04 |
| 29 | GO:0009662: etioplast organization | 2.24E-04 |
| 30 | GO:0016998: cell wall macromolecule catabolic process | 3.65E-04 |
| 31 | GO:0006000: fructose metabolic process | 3.73E-04 |
| 32 | GO:0080117: secondary growth | 3.73E-04 |
| 33 | GO:1902806: regulation of cell cycle G1/S phase transition | 3.73E-04 |
| 34 | GO:0090391: granum assembly | 3.73E-04 |
| 35 | GO:0090436: leaf pavement cell development | 3.73E-04 |
| 36 | GO:0001578: microtubule bundle formation | 3.73E-04 |
| 37 | GO:0009954: proximal/distal pattern formation | 3.73E-04 |
| 38 | GO:0010476: gibberellin mediated signaling pathway | 3.73E-04 |
| 39 | GO:0071215: cellular response to abscisic acid stimulus | 4.36E-04 |
| 40 | GO:0010239: chloroplast mRNA processing | 5.37E-04 |
| 41 | GO:0009800: cinnamic acid biosynthetic process | 5.37E-04 |
| 42 | GO:0046739: transport of virus in multicellular host | 5.37E-04 |
| 43 | GO:0010371: regulation of gibberellin biosynthetic process | 5.37E-04 |
| 44 | GO:1902476: chloride transmembrane transport | 5.37E-04 |
| 45 | GO:0051322: anaphase | 7.14E-04 |
| 46 | GO:1902584: positive regulation of response to water deprivation | 7.14E-04 |
| 47 | GO:1901002: positive regulation of response to salt stress | 7.14E-04 |
| 48 | GO:0006346: methylation-dependent chromatin silencing | 7.14E-04 |
| 49 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 9.02E-04 |
| 50 | GO:0048497: maintenance of floral organ identity | 9.02E-04 |
| 51 | GO:0009793: embryo development ending in seed dormancy | 1.08E-03 |
| 52 | GO:0006559: L-phenylalanine catabolic process | 1.10E-03 |
| 53 | GO:0009913: epidermal cell differentiation | 1.10E-03 |
| 54 | GO:0048831: regulation of shoot system development | 1.10E-03 |
| 55 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.10E-03 |
| 56 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.10E-03 |
| 57 | GO:0007166: cell surface receptor signaling pathway | 1.14E-03 |
| 58 | GO:0008380: RNA splicing | 1.20E-03 |
| 59 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.31E-03 |
| 60 | GO:0009955: adaxial/abaxial pattern specification | 1.31E-03 |
| 61 | GO:0048509: regulation of meristem development | 1.31E-03 |
| 62 | GO:0009554: megasporogenesis | 1.31E-03 |
| 63 | GO:2000037: regulation of stomatal complex patterning | 1.31E-03 |
| 64 | GO:0048437: floral organ development | 1.54E-03 |
| 65 | GO:0006821: chloride transport | 1.54E-03 |
| 66 | GO:0010444: guard mother cell differentiation | 1.54E-03 |
| 67 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.54E-03 |
| 68 | GO:0009642: response to light intensity | 1.78E-03 |
| 69 | GO:0030162: regulation of proteolysis | 1.78E-03 |
| 70 | GO:0042255: ribosome assembly | 1.78E-03 |
| 71 | GO:0006353: DNA-templated transcription, termination | 1.78E-03 |
| 72 | GO:0001522: pseudouridine synthesis | 1.78E-03 |
| 73 | GO:0032875: regulation of DNA endoreduplication | 1.78E-03 |
| 74 | GO:0006002: fructose 6-phosphate metabolic process | 2.03E-03 |
| 75 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.03E-03 |
| 76 | GO:0010052: guard cell differentiation | 2.03E-03 |
| 77 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.27E-03 |
| 78 | GO:0009688: abscisic acid biosynthetic process | 2.85E-03 |
| 79 | GO:0006096: glycolytic process | 3.41E-03 |
| 80 | GO:0010582: floral meristem determinacy | 3.44E-03 |
| 81 | GO:0010075: regulation of meristem growth | 3.76E-03 |
| 82 | GO:0009934: regulation of meristem structural organization | 4.08E-03 |
| 83 | GO:0080188: RNA-directed DNA methylation | 4.41E-03 |
| 84 | GO:0006071: glycerol metabolic process | 4.75E-03 |
| 85 | GO:0000027: ribosomal large subunit assembly | 5.10E-03 |
| 86 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.10E-03 |
| 87 | GO:0009845: seed germination | 5.54E-03 |
| 88 | GO:0006306: DNA methylation | 5.83E-03 |
| 89 | GO:0010431: seed maturation | 5.83E-03 |
| 90 | GO:0010227: floral organ abscission | 6.58E-03 |
| 91 | GO:0070417: cellular response to cold | 7.38E-03 |
| 92 | GO:0048653: anther development | 7.79E-03 |
| 93 | GO:0000226: microtubule cytoskeleton organization | 7.79E-03 |
| 94 | GO:0080022: primary root development | 7.79E-03 |
| 95 | GO:0010501: RNA secondary structure unwinding | 7.79E-03 |
| 96 | GO:0010087: phloem or xylem histogenesis | 7.79E-03 |
| 97 | GO:0006814: sodium ion transport | 8.63E-03 |
| 98 | GO:0048825: cotyledon development | 9.06E-03 |
| 99 | GO:0009749: response to glucose | 9.06E-03 |
| 100 | GO:0009851: auxin biosynthetic process | 9.06E-03 |
| 101 | GO:0031047: gene silencing by RNA | 9.96E-03 |
| 102 | GO:0032502: developmental process | 9.96E-03 |
| 103 | GO:0042254: ribosome biogenesis | 1.11E-02 |
| 104 | GO:0071805: potassium ion transmembrane transport | 1.14E-02 |
| 105 | GO:0006468: protein phosphorylation | 1.15E-02 |
| 106 | GO:0000910: cytokinesis | 1.18E-02 |
| 107 | GO:0010027: thylakoid membrane organization | 1.23E-02 |
| 108 | GO:0010029: regulation of seed germination | 1.28E-02 |
| 109 | GO:0048366: leaf development | 1.29E-02 |
| 110 | GO:0010411: xyloglucan metabolic process | 1.38E-02 |
| 111 | GO:0000160: phosphorelay signal transduction system | 1.54E-02 |
| 112 | GO:0009832: plant-type cell wall biogenesis | 1.54E-02 |
| 113 | GO:0006499: N-terminal protein myristoylation | 1.59E-02 |
| 114 | GO:0030001: metal ion transport | 1.93E-02 |
| 115 | GO:0008283: cell proliferation | 2.10E-02 |
| 116 | GO:0009926: auxin polar transport | 2.10E-02 |
| 117 | GO:0042546: cell wall biogenesis | 2.16E-02 |
| 118 | GO:0009636: response to toxic substance | 2.29E-02 |
| 119 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.41E-02 |
| 120 | GO:0006813: potassium ion transport | 2.60E-02 |
| 121 | GO:0009736: cytokinin-activated signaling pathway | 2.60E-02 |
| 122 | GO:0006417: regulation of translation | 2.80E-02 |
| 123 | GO:0009909: regulation of flower development | 2.80E-02 |
| 124 | GO:0048367: shoot system development | 3.00E-02 |
| 125 | GO:0009553: embryo sac development | 3.27E-02 |
| 126 | GO:0006396: RNA processing | 3.42E-02 |
| 127 | GO:0009416: response to light stimulus | 3.56E-02 |
| 128 | GO:0051301: cell division | 3.88E-02 |
| 129 | GO:0009790: embryo development | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042834: peptidoglycan binding | 0.00E+00 |
| 2 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 3 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 4 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 4.33E-06 |
| 5 | GO:0003723: RNA binding | 1.05E-04 |
| 6 | GO:0009982: pseudouridine synthase activity | 1.88E-04 |
| 7 | GO:0005078: MAP-kinase scaffold activity | 2.24E-04 |
| 8 | GO:0009884: cytokinin receptor activity | 2.24E-04 |
| 9 | GO:0017150: tRNA dihydrouridine synthase activity | 3.73E-04 |
| 10 | GO:0045548: phenylalanine ammonia-lyase activity | 3.73E-04 |
| 11 | GO:0032947: protein complex scaffold | 3.73E-04 |
| 12 | GO:0005034: osmosensor activity | 3.73E-04 |
| 13 | GO:0003727: single-stranded RNA binding | 4.74E-04 |
| 14 | GO:0008508: bile acid:sodium symporter activity | 5.37E-04 |
| 15 | GO:0004519: endonuclease activity | 6.94E-04 |
| 16 | GO:0004031: aldehyde oxidase activity | 7.14E-04 |
| 17 | GO:0050302: indole-3-acetaldehyde oxidase activity | 7.14E-04 |
| 18 | GO:0005253: anion channel activity | 7.14E-04 |
| 19 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.86E-04 |
| 20 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.02E-04 |
| 21 | GO:0005515: protein binding | 1.07E-03 |
| 22 | GO:0080030: methyl indole-3-acetate esterase activity | 1.10E-03 |
| 23 | GO:0005247: voltage-gated chloride channel activity | 1.10E-03 |
| 24 | GO:2001070: starch binding | 1.10E-03 |
| 25 | GO:0019900: kinase binding | 1.31E-03 |
| 26 | GO:0004672: protein kinase activity | 1.84E-03 |
| 27 | GO:0008173: RNA methyltransferase activity | 2.03E-03 |
| 28 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 2.03E-03 |
| 29 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.29E-03 |
| 30 | GO:0004673: protein histidine kinase activity | 2.85E-03 |
| 31 | GO:0008559: xenobiotic-transporting ATPase activity | 3.14E-03 |
| 32 | GO:0003777: microtubule motor activity | 3.20E-03 |
| 33 | GO:0000155: phosphorelay sensor kinase activity | 3.76E-03 |
| 34 | GO:0019843: rRNA binding | 5.12E-03 |
| 35 | GO:0043424: protein histidine kinase binding | 5.46E-03 |
| 36 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.46E-03 |
| 37 | GO:0015079: potassium ion transmembrane transporter activity | 5.46E-03 |
| 38 | GO:0004176: ATP-dependent peptidase activity | 5.83E-03 |
| 39 | GO:0033612: receptor serine/threonine kinase binding | 5.83E-03 |
| 40 | GO:0008017: microtubule binding | 7.39E-03 |
| 41 | GO:0001085: RNA polymerase II transcription factor binding | 8.21E-03 |
| 42 | GO:0003713: transcription coactivator activity | 8.21E-03 |
| 43 | GO:0005524: ATP binding | 8.58E-03 |
| 44 | GO:0019901: protein kinase binding | 9.06E-03 |
| 45 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 9.51E-03 |
| 46 | GO:0016788: hydrolase activity, acting on ester bonds | 1.11E-02 |
| 47 | GO:0008237: metallopeptidase activity | 1.14E-02 |
| 48 | GO:0003682: chromatin binding | 1.16E-02 |
| 49 | GO:0003735: structural constituent of ribosome | 1.19E-02 |
| 50 | GO:0050660: flavin adenine dinucleotide binding | 1.27E-02 |
| 51 | GO:0004004: ATP-dependent RNA helicase activity | 1.38E-02 |
| 52 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.38E-02 |
| 53 | GO:0004222: metalloendopeptidase activity | 1.59E-02 |
| 54 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.59E-02 |
| 55 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.65E-02 |
| 56 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.65E-02 |
| 57 | GO:0004871: signal transducer activity | 1.71E-02 |
| 58 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.93E-02 |
| 59 | GO:0005215: transporter activity | 2.05E-02 |
| 60 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.23E-02 |
| 61 | GO:0005198: structural molecule activity | 2.29E-02 |
| 62 | GO:0003690: double-stranded DNA binding | 2.67E-02 |
| 63 | GO:0031625: ubiquitin protein ligase binding | 2.80E-02 |
| 64 | GO:0003729: mRNA binding | 2.97E-02 |
| 65 | GO:0008026: ATP-dependent helicase activity | 3.49E-02 |
| 66 | GO:0004386: helicase activity | 3.56E-02 |
| 67 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.30E-02 |
| 68 | GO:0004674: protein serine/threonine kinase activity | 4.54E-02 |