GO Enrichment Analysis of Co-expressed Genes with
AT3G14240
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071000: response to magnetism | 0.00E+00 |
| 2 | GO:0031129: inductive cell-cell signaling | 0.00E+00 |
| 3 | GO:0010068: protoderm histogenesis | 0.00E+00 |
| 4 | GO:0007172: signal complex assembly | 0.00E+00 |
| 5 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 6 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 7 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 8 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 9 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 10 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 11 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 12 | GO:0009638: phototropism | 1.32E-05 |
| 13 | GO:0009658: chloroplast organization | 5.14E-05 |
| 14 | GO:0010158: abaxial cell fate specification | 6.67E-05 |
| 15 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.54E-05 |
| 16 | GO:0006468: protein phosphorylation | 1.10E-04 |
| 17 | GO:0042255: ribosome assembly | 2.25E-04 |
| 18 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.25E-04 |
| 19 | GO:0010482: regulation of epidermal cell division | 2.46E-04 |
| 20 | GO:0072387: flavin adenine dinucleotide metabolic process | 2.46E-04 |
| 21 | GO:0006264: mitochondrial DNA replication | 2.46E-04 |
| 22 | GO:0033259: plastid DNA replication | 2.46E-04 |
| 23 | GO:0010450: inflorescence meristem growth | 2.46E-04 |
| 24 | GO:0051171: regulation of nitrogen compound metabolic process | 2.46E-04 |
| 25 | GO:1902265: abscisic acid homeostasis | 2.46E-04 |
| 26 | GO:0032502: developmental process | 2.91E-04 |
| 27 | GO:2000039: regulation of trichome morphogenesis | 5.44E-04 |
| 28 | GO:1900871: chloroplast mRNA modification | 5.44E-04 |
| 29 | GO:0010617: circadian regulation of calcium ion oscillation | 5.44E-04 |
| 30 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.44E-04 |
| 31 | GO:0007154: cell communication | 5.44E-04 |
| 32 | GO:0099402: plant organ development | 5.44E-04 |
| 33 | GO:1900033: negative regulation of trichome patterning | 5.44E-04 |
| 34 | GO:0042814: monopolar cell growth | 5.44E-04 |
| 35 | GO:0009786: regulation of asymmetric cell division | 5.44E-04 |
| 36 | GO:0010343: singlet oxygen-mediated programmed cell death | 5.44E-04 |
| 37 | GO:1901529: positive regulation of anion channel activity | 5.44E-04 |
| 38 | GO:0009785: blue light signaling pathway | 7.00E-04 |
| 39 | GO:0045604: regulation of epidermal cell differentiation | 8.83E-04 |
| 40 | GO:1901672: positive regulation of systemic acquired resistance | 8.83E-04 |
| 41 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 8.83E-04 |
| 42 | GO:0043693: monoterpene biosynthetic process | 8.83E-04 |
| 43 | GO:0051604: protein maturation | 8.83E-04 |
| 44 | GO:0016050: vesicle organization | 8.83E-04 |
| 45 | GO:0045165: cell fate commitment | 8.83E-04 |
| 46 | GO:0031022: nuclear migration along microfilament | 8.83E-04 |
| 47 | GO:0051127: positive regulation of actin nucleation | 8.83E-04 |
| 48 | GO:1902448: positive regulation of shade avoidance | 8.83E-04 |
| 49 | GO:0010187: negative regulation of seed germination | 1.08E-03 |
| 50 | GO:0048645: animal organ formation | 1.26E-03 |
| 51 | GO:0010255: glucose mediated signaling pathway | 1.26E-03 |
| 52 | GO:0048530: fruit morphogenesis | 1.26E-03 |
| 53 | GO:1901332: negative regulation of lateral root development | 1.26E-03 |
| 54 | GO:2000904: regulation of starch metabolic process | 1.26E-03 |
| 55 | GO:0009067: aspartate family amino acid biosynthetic process | 1.26E-03 |
| 56 | GO:0007231: osmosensory signaling pathway | 1.26E-03 |
| 57 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 1.26E-03 |
| 58 | GO:0051639: actin filament network formation | 1.26E-03 |
| 59 | GO:0044211: CTP salvage | 1.26E-03 |
| 60 | GO:0033500: carbohydrate homeostasis | 1.68E-03 |
| 61 | GO:0044206: UMP salvage | 1.68E-03 |
| 62 | GO:0044205: 'de novo' UMP biosynthetic process | 1.68E-03 |
| 63 | GO:1902347: response to strigolactone | 1.68E-03 |
| 64 | GO:0009902: chloroplast relocation | 1.68E-03 |
| 65 | GO:0009165: nucleotide biosynthetic process | 1.68E-03 |
| 66 | GO:0048629: trichome patterning | 1.68E-03 |
| 67 | GO:0051764: actin crosslink formation | 1.68E-03 |
| 68 | GO:0022622: root system development | 1.68E-03 |
| 69 | GO:0016310: phosphorylation | 2.04E-03 |
| 70 | GO:0009958: positive gravitropism | 2.12E-03 |
| 71 | GO:0010117: photoprotection | 2.15E-03 |
| 72 | GO:0046283: anthocyanin-containing compound metabolic process | 2.15E-03 |
| 73 | GO:1902183: regulation of shoot apical meristem development | 2.15E-03 |
| 74 | GO:0032876: negative regulation of DNA endoreduplication | 2.15E-03 |
| 75 | GO:0009740: gibberellic acid mediated signaling pathway | 2.37E-03 |
| 76 | GO:0006139: nucleobase-containing compound metabolic process | 2.65E-03 |
| 77 | GO:1901371: regulation of leaf morphogenesis | 2.65E-03 |
| 78 | GO:0006206: pyrimidine nucleobase metabolic process | 2.65E-03 |
| 79 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.65E-03 |
| 80 | GO:0010405: arabinogalactan protein metabolic process | 2.65E-03 |
| 81 | GO:0009959: negative gravitropism | 2.65E-03 |
| 82 | GO:0060918: auxin transport | 2.65E-03 |
| 83 | GO:2000033: regulation of seed dormancy process | 3.18E-03 |
| 84 | GO:0009903: chloroplast avoidance movement | 3.18E-03 |
| 85 | GO:0030488: tRNA methylation | 3.18E-03 |
| 86 | GO:0009088: threonine biosynthetic process | 3.18E-03 |
| 87 | GO:0048444: floral organ morphogenesis | 3.18E-03 |
| 88 | GO:0010310: regulation of hydrogen peroxide metabolic process | 3.18E-03 |
| 89 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 3.18E-03 |
| 90 | GO:0030154: cell differentiation | 3.45E-03 |
| 91 | GO:0051510: regulation of unidimensional cell growth | 3.75E-03 |
| 92 | GO:0032880: regulation of protein localization | 3.75E-03 |
| 93 | GO:0010161: red light signaling pathway | 3.75E-03 |
| 94 | GO:0009610: response to symbiotic fungus | 3.75E-03 |
| 95 | GO:0010050: vegetative phase change | 3.75E-03 |
| 96 | GO:0010029: regulation of seed germination | 3.98E-03 |
| 97 | GO:0033386: geranylgeranyl diphosphate biosynthetic process | 4.35E-03 |
| 98 | GO:0006353: DNA-templated transcription, termination | 4.35E-03 |
| 99 | GO:0009850: auxin metabolic process | 4.35E-03 |
| 100 | GO:0009704: de-etiolation | 4.35E-03 |
| 101 | GO:0032875: regulation of DNA endoreduplication | 4.35E-03 |
| 102 | GO:0010100: negative regulation of photomorphogenesis | 4.98E-03 |
| 103 | GO:0006526: arginine biosynthetic process | 4.98E-03 |
| 104 | GO:0007389: pattern specification process | 4.98E-03 |
| 105 | GO:0010093: specification of floral organ identity | 4.98E-03 |
| 106 | GO:0010099: regulation of photomorphogenesis | 4.98E-03 |
| 107 | GO:0006002: fructose 6-phosphate metabolic process | 4.98E-03 |
| 108 | GO:0009827: plant-type cell wall modification | 4.98E-03 |
| 109 | GO:0007623: circadian rhythm | 5.12E-03 |
| 110 | GO:2000024: regulation of leaf development | 5.65E-03 |
| 111 | GO:0033384: geranyl diphosphate biosynthetic process | 5.65E-03 |
| 112 | GO:0006783: heme biosynthetic process | 5.65E-03 |
| 113 | GO:0000373: Group II intron splicing | 5.65E-03 |
| 114 | GO:0000902: cell morphogenesis | 5.65E-03 |
| 115 | GO:0009051: pentose-phosphate shunt, oxidative branch | 5.65E-03 |
| 116 | GO:0045337: farnesyl diphosphate biosynthetic process | 5.65E-03 |
| 117 | GO:0007166: cell surface receptor signaling pathway | 6.07E-03 |
| 118 | GO:0009637: response to blue light | 6.21E-03 |
| 119 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.33E-03 |
| 120 | GO:1900426: positive regulation of defense response to bacterium | 6.33E-03 |
| 121 | GO:1900865: chloroplast RNA modification | 6.33E-03 |
| 122 | GO:0009299: mRNA transcription | 7.06E-03 |
| 123 | GO:0006535: cysteine biosynthetic process from serine | 7.06E-03 |
| 124 | GO:0048829: root cap development | 7.06E-03 |
| 125 | GO:0010162: seed dormancy process | 7.06E-03 |
| 126 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.80E-03 |
| 127 | GO:0006415: translational termination | 7.80E-03 |
| 128 | GO:0006816: calcium ion transport | 7.80E-03 |
| 129 | GO:0009773: photosynthetic electron transport in photosystem I | 7.80E-03 |
| 130 | GO:0010582: floral meristem determinacy | 8.58E-03 |
| 131 | GO:0030048: actin filament-based movement | 9.38E-03 |
| 132 | GO:0010628: positive regulation of gene expression | 9.38E-03 |
| 133 | GO:0006006: glucose metabolic process | 9.38E-03 |
| 134 | GO:0030036: actin cytoskeleton organization | 9.38E-03 |
| 135 | GO:0010075: regulation of meristem growth | 9.38E-03 |
| 136 | GO:0009725: response to hormone | 9.38E-03 |
| 137 | GO:0009767: photosynthetic electron transport chain | 9.38E-03 |
| 138 | GO:2000012: regulation of auxin polar transport | 9.38E-03 |
| 139 | GO:0009933: meristem structural organization | 1.02E-02 |
| 140 | GO:0009934: regulation of meristem structural organization | 1.02E-02 |
| 141 | GO:0010020: chloroplast fission | 1.02E-02 |
| 142 | GO:0090351: seedling development | 1.11E-02 |
| 143 | GO:0010030: positive regulation of seed germination | 1.11E-02 |
| 144 | GO:0070588: calcium ion transmembrane transport | 1.11E-02 |
| 145 | GO:0009733: response to auxin | 1.20E-02 |
| 146 | GO:0046777: protein autophosphorylation | 1.28E-02 |
| 147 | GO:0007010: cytoskeleton organization | 1.29E-02 |
| 148 | GO:0051017: actin filament bundle assembly | 1.29E-02 |
| 149 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.29E-02 |
| 150 | GO:0005992: trehalose biosynthetic process | 1.29E-02 |
| 151 | GO:0019344: cysteine biosynthetic process | 1.29E-02 |
| 152 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.29E-02 |
| 153 | GO:0048367: shoot system development | 1.32E-02 |
| 154 | GO:0006825: copper ion transport | 1.38E-02 |
| 155 | GO:0008299: isoprenoid biosynthetic process | 1.38E-02 |
| 156 | GO:0006418: tRNA aminoacylation for protein translation | 1.38E-02 |
| 157 | GO:0009686: gibberellin biosynthetic process | 1.67E-02 |
| 158 | GO:0010082: regulation of root meristem growth | 1.67E-02 |
| 159 | GO:0010091: trichome branching | 1.77E-02 |
| 160 | GO:0008284: positive regulation of cell proliferation | 1.88E-02 |
| 161 | GO:0016117: carotenoid biosynthetic process | 1.88E-02 |
| 162 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.88E-02 |
| 163 | GO:0042335: cuticle development | 1.99E-02 |
| 164 | GO:0000271: polysaccharide biosynthetic process | 1.99E-02 |
| 165 | GO:0008033: tRNA processing | 1.99E-02 |
| 166 | GO:0010087: phloem or xylem histogenesis | 1.99E-02 |
| 167 | GO:0010118: stomatal movement | 1.99E-02 |
| 168 | GO:0042631: cellular response to water deprivation | 1.99E-02 |
| 169 | GO:0000226: microtubule cytoskeleton organization | 1.99E-02 |
| 170 | GO:0048364: root development | 2.03E-02 |
| 171 | GO:0010154: fruit development | 2.09E-02 |
| 172 | GO:0010182: sugar mediated signaling pathway | 2.09E-02 |
| 173 | GO:0045489: pectin biosynthetic process | 2.09E-02 |
| 174 | GO:0008360: regulation of cell shape | 2.09E-02 |
| 175 | GO:0042752: regulation of circadian rhythm | 2.21E-02 |
| 176 | GO:0009646: response to absence of light | 2.21E-02 |
| 177 | GO:0040008: regulation of growth | 2.55E-02 |
| 178 | GO:0010583: response to cyclopentenone | 2.55E-02 |
| 179 | GO:0071281: cellular response to iron ion | 2.67E-02 |
| 180 | GO:0010252: auxin homeostasis | 2.79E-02 |
| 181 | GO:0006464: cellular protein modification process | 2.79E-02 |
| 182 | GO:0071805: potassium ion transmembrane transport | 2.91E-02 |
| 183 | GO:0009734: auxin-activated signaling pathway | 2.96E-02 |
| 184 | GO:0051607: defense response to virus | 3.04E-02 |
| 185 | GO:0008380: RNA splicing | 3.19E-02 |
| 186 | GO:0007165: signal transduction | 3.41E-02 |
| 187 | GO:0015995: chlorophyll biosynthetic process | 3.55E-02 |
| 188 | GO:0009738: abscisic acid-activated signaling pathway | 3.78E-02 |
| 189 | GO:0018298: protein-chromophore linkage | 3.82E-02 |
| 190 | GO:0009416: response to light stimulus | 3.93E-02 |
| 191 | GO:0010311: lateral root formation | 3.96E-02 |
| 192 | GO:0000160: phosphorelay signal transduction system | 3.96E-02 |
| 193 | GO:0010218: response to far red light | 4.10E-02 |
| 194 | GO:0009910: negative regulation of flower development | 4.24E-02 |
| 195 | GO:0048527: lateral root development | 4.24E-02 |
| 196 | GO:0016051: carbohydrate biosynthetic process | 4.52E-02 |
| 197 | GO:0009723: response to ethylene | 4.76E-02 |
| 198 | GO:0006839: mitochondrial transport | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 2 | GO:0016301: kinase activity | 8.59E-07 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 1.30E-05 |
| 4 | GO:0005524: ATP binding | 5.13E-05 |
| 5 | GO:0003727: single-stranded RNA binding | 1.42E-04 |
| 6 | GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity | 2.46E-04 |
| 7 | GO:0010313: phytochrome binding | 2.46E-04 |
| 8 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.46E-04 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.46E-04 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.46E-04 |
| 11 | GO:0004008: copper-exporting ATPase activity | 2.46E-04 |
| 12 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 5.39E-04 |
| 13 | GO:0050017: L-3-cyanoalanine synthase activity | 5.44E-04 |
| 14 | GO:0017118: lipoyltransferase activity | 5.44E-04 |
| 15 | GO:0043425: bHLH transcription factor binding | 5.44E-04 |
| 16 | GO:0004817: cysteine-tRNA ligase activity | 5.44E-04 |
| 17 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.44E-04 |
| 18 | GO:0004672: protein kinase activity | 5.98E-04 |
| 19 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.48E-04 |
| 20 | GO:0043621: protein self-association | 1.24E-03 |
| 21 | GO:0017172: cysteine dioxygenase activity | 1.26E-03 |
| 22 | GO:0009882: blue light photoreceptor activity | 1.26E-03 |
| 23 | GO:0004072: aspartate kinase activity | 1.26E-03 |
| 24 | GO:0004176: ATP-dependent peptidase activity | 1.30E-03 |
| 25 | GO:0019199: transmembrane receptor protein kinase activity | 1.68E-03 |
| 26 | GO:0004845: uracil phosphoribosyltransferase activity | 1.68E-03 |
| 27 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.68E-03 |
| 28 | GO:0008409: 5'-3' exonuclease activity | 1.68E-03 |
| 29 | GO:0080032: methyl jasmonate esterase activity | 1.68E-03 |
| 30 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.15E-03 |
| 31 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.65E-03 |
| 32 | GO:0004849: uridine kinase activity | 3.18E-03 |
| 33 | GO:0003730: mRNA 3'-UTR binding | 3.18E-03 |
| 34 | GO:0004124: cysteine synthase activity | 3.18E-03 |
| 35 | GO:0042803: protein homodimerization activity | 3.57E-03 |
| 36 | GO:0003872: 6-phosphofructokinase activity | 3.75E-03 |
| 37 | GO:0004311: farnesyltranstransferase activity | 4.35E-03 |
| 38 | GO:0005375: copper ion transmembrane transporter activity | 4.98E-03 |
| 39 | GO:0003747: translation release factor activity | 5.65E-03 |
| 40 | GO:0004337: geranyltranstransferase activity | 5.65E-03 |
| 41 | GO:0071949: FAD binding | 5.65E-03 |
| 42 | GO:0009672: auxin:proton symporter activity | 6.33E-03 |
| 43 | GO:0042802: identical protein binding | 6.94E-03 |
| 44 | GO:0004805: trehalose-phosphatase activity | 7.06E-03 |
| 45 | GO:0004713: protein tyrosine kinase activity | 7.06E-03 |
| 46 | GO:0004161: dimethylallyltranstransferase activity | 7.80E-03 |
| 47 | GO:0010329: auxin efflux transmembrane transporter activity | 9.38E-03 |
| 48 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 9.38E-03 |
| 49 | GO:0005262: calcium channel activity | 9.38E-03 |
| 50 | GO:0044212: transcription regulatory region DNA binding | 9.79E-03 |
| 51 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.02E-02 |
| 52 | GO:0008083: growth factor activity | 1.02E-02 |
| 53 | GO:0003690: double-stranded DNA binding | 1.12E-02 |
| 54 | GO:0003887: DNA-directed DNA polymerase activity | 1.20E-02 |
| 55 | GO:0015079: potassium ion transmembrane transporter activity | 1.38E-02 |
| 56 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.38E-02 |
| 57 | GO:0016874: ligase activity | 1.45E-02 |
| 58 | GO:0033612: receptor serine/threonine kinase binding | 1.47E-02 |
| 59 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.57E-02 |
| 60 | GO:0030570: pectate lyase activity | 1.67E-02 |
| 61 | GO:0030246: carbohydrate binding | 1.71E-02 |
| 62 | GO:0008514: organic anion transmembrane transporter activity | 1.77E-02 |
| 63 | GO:0004812: aminoacyl-tRNA ligase activity | 1.88E-02 |
| 64 | GO:0016758: transferase activity, transferring hexosyl groups | 1.89E-02 |
| 65 | GO:0019843: rRNA binding | 1.94E-02 |
| 66 | GO:0001085: RNA polymerase II transcription factor binding | 2.09E-02 |
| 67 | GO:0004252: serine-type endopeptidase activity | 2.15E-02 |
| 68 | GO:0005515: protein binding | 2.19E-02 |
| 69 | GO:0010181: FMN binding | 2.21E-02 |
| 70 | GO:0000156: phosphorelay response regulator activity | 2.67E-02 |
| 71 | GO:0051015: actin filament binding | 2.67E-02 |
| 72 | GO:0043565: sequence-specific DNA binding | 2.79E-02 |
| 73 | GO:0008017: microtubule binding | 2.80E-02 |
| 74 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.91E-02 |
| 75 | GO:0008237: metallopeptidase activity | 2.91E-02 |
| 76 | GO:0016597: amino acid binding | 3.04E-02 |
| 77 | GO:0030247: polysaccharide binding | 3.55E-02 |
| 78 | GO:0005215: transporter activity | 3.61E-02 |
| 79 | GO:0008236: serine-type peptidase activity | 3.69E-02 |
| 80 | GO:0015238: drug transmembrane transporter activity | 3.96E-02 |
| 81 | GO:0004222: metalloendopeptidase activity | 4.10E-02 |
| 82 | GO:0016788: hydrolase activity, acting on ester bonds | 4.21E-02 |
| 83 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.24E-02 |
| 84 | GO:0050661: NADP binding | 4.96E-02 |