Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14220

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:1905421: regulation of plant organ morphogenesis0.00E+00
3GO:0030155: regulation of cell adhesion0.00E+00
4GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
5GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
6GO:0009606: tropism0.00E+00
7GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
8GO:0007638: mechanosensory behavior0.00E+00
9GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
10GO:0097164: ammonium ion metabolic process0.00E+00
11GO:0006399: tRNA metabolic process0.00E+00
12GO:0009658: chloroplast organization2.28E-07
13GO:0007389: pattern specification process1.72E-05
14GO:0000373: Group II intron splicing2.37E-05
15GO:0032502: developmental process5.12E-05
16GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.66E-05
17GO:0010252: auxin homeostasis6.55E-05
18GO:0006468: protein phosphorylation1.41E-04
19GO:0009944: polarity specification of adaxial/abaxial axis1.57E-04
20GO:0048437: floral organ development3.09E-04
21GO:0009926: auxin polar transport3.39E-04
22GO:0009734: auxin-activated signaling pathway3.48E-04
23GO:0006436: tryptophanyl-tRNA aminoacylation3.55E-04
24GO:0034757: negative regulation of iron ion transport3.55E-04
25GO:0034970: histone H3-R2 methylation3.55E-04
26GO:0034972: histone H3-R26 methylation3.55E-04
27GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic3.55E-04
28GO:0010063: positive regulation of trichoblast fate specification3.55E-04
29GO:0010480: microsporocyte differentiation3.55E-04
30GO:0034971: histone H3-R17 methylation3.55E-04
31GO:0042255: ribosome assembly3.89E-04
32GO:0046620: regulation of organ growth3.89E-04
33GO:0009451: RNA modification4.47E-04
34GO:0009657: plastid organization4.76E-04
35GO:0000902: cell morphogenesis5.70E-04
36GO:0048364: root development7.40E-04
37GO:0006529: asparagine biosynthetic process7.72E-04
38GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine7.72E-04
39GO:2000123: positive regulation of stomatal complex development7.72E-04
40GO:0010254: nectary development7.72E-04
41GO:0070981: L-asparagine biosynthetic process7.72E-04
42GO:0010271: regulation of chlorophyll catabolic process7.72E-04
43GO:1902326: positive regulation of chlorophyll biosynthetic process7.72E-04
44GO:0018026: peptidyl-lysine monomethylation7.72E-04
45GO:0010434: bract formation7.72E-04
46GO:1904143: positive regulation of carotenoid biosynthetic process7.72E-04
47GO:0048439: flower morphogenesis7.72E-04
48GO:0009786: regulation of asymmetric cell division7.72E-04
49GO:0048229: gametophyte development9.04E-04
50GO:0010582: floral meristem determinacy1.03E-03
51GO:0009954: proximal/distal pattern formation1.25E-03
52GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.25E-03
53GO:0045910: negative regulation of DNA recombination1.25E-03
54GO:0048281: inflorescence morphogenesis1.25E-03
55GO:0080117: secondary growth1.25E-03
56GO:0042780: tRNA 3'-end processing1.25E-03
57GO:0001578: microtubule bundle formation1.25E-03
58GO:0000160: phosphorelay signal transduction system1.26E-03
59GO:0010020: chloroplast fission1.31E-03
60GO:1902476: chloride transmembrane transport1.80E-03
61GO:0010071: root meristem specification1.80E-03
62GO:0051513: regulation of monopolar cell growth1.80E-03
63GO:0007231: osmosensory signaling pathway1.80E-03
64GO:0051639: actin filament network formation1.80E-03
65GO:0010239: chloroplast mRNA processing1.80E-03
66GO:0044211: CTP salvage1.80E-03
67GO:0019048: modulation by virus of host morphology or physiology1.80E-03
68GO:0015696: ammonium transport1.80E-03
69GO:0046739: transport of virus in multicellular host1.80E-03
70GO:2000904: regulation of starch metabolic process1.80E-03
71GO:0031048: chromatin silencing by small RNA1.80E-03
72GO:0010148: transpiration1.80E-03
73GO:0009558: embryo sac cellularization1.80E-03
74GO:0043572: plastid fission1.80E-03
75GO:2001141: regulation of RNA biosynthetic process1.80E-03
76GO:0016556: mRNA modification1.80E-03
77GO:0040008: regulation of growth1.98E-03
78GO:0009416: response to light stimulus2.11E-03
79GO:0051764: actin crosslink formation2.42E-03
80GO:0051322: anaphase2.42E-03
81GO:0033500: carbohydrate homeostasis2.42E-03
82GO:0072488: ammonium transmembrane transport2.42E-03
83GO:2000038: regulation of stomatal complex development2.42E-03
84GO:0051567: histone H3-K9 methylation2.42E-03
85GO:0044206: UMP salvage2.42E-03
86GO:0009165: nucleotide biosynthetic process2.42E-03
87GO:0007166: cell surface receptor signaling pathway2.61E-03
88GO:0010082: regulation of root meristem growth2.63E-03
89GO:0001944: vasculature development2.63E-03
90GO:1902183: regulation of shoot apical meristem development3.09E-03
91GO:0010158: abaxial cell fate specification3.09E-03
92GO:0048578: positive regulation of long-day photoperiodism, flowering3.09E-03
93GO:0010375: stomatal complex patterning3.09E-03
94GO:0006544: glycine metabolic process3.09E-03
95GO:0048497: maintenance of floral organ identity3.09E-03
96GO:0009736: cytokinin-activated signaling pathway3.23E-03
97GO:0008033: tRNA processing3.34E-03
98GO:0009741: response to brassinosteroid3.61E-03
99GO:0010405: arabinogalactan protein metabolic process3.82E-03
100GO:0010304: PSII associated light-harvesting complex II catabolic process3.82E-03
101GO:0009913: epidermal cell differentiation3.82E-03
102GO:0006655: phosphatidylglycerol biosynthetic process3.82E-03
103GO:0006139: nucleobase-containing compound metabolic process3.82E-03
104GO:0042793: transcription from plastid promoter3.82E-03
105GO:0048831: regulation of shoot system development3.82E-03
106GO:0010315: auxin efflux3.82E-03
107GO:0016458: gene silencing3.82E-03
108GO:0006206: pyrimidine nucleobase metabolic process3.82E-03
109GO:0018258: protein O-linked glycosylation via hydroxyproline3.82E-03
110GO:0009228: thiamine biosynthetic process3.82E-03
111GO:0006563: L-serine metabolic process3.82E-03
112GO:0009646: response to absence of light3.88E-03
113GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.60E-03
114GO:0009955: adaxial/abaxial pattern specification4.60E-03
115GO:0009082: branched-chain amino acid biosynthetic process4.60E-03
116GO:0010067: procambium histogenesis4.60E-03
117GO:0009942: longitudinal axis specification4.60E-03
118GO:0048509: regulation of meristem development4.60E-03
119GO:0009099: valine biosynthetic process4.60E-03
120GO:0030488: tRNA methylation4.60E-03
121GO:1901259: chloroplast rRNA processing4.60E-03
122GO:0010583: response to cyclopentenone4.75E-03
123GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.44E-03
124GO:0009610: response to symbiotic fungus5.44E-03
125GO:0006955: immune response5.44E-03
126GO:0006821: chloride transport5.44E-03
127GO:0070370: cellular heat acclimation5.44E-03
128GO:0010050: vegetative phase change5.44E-03
129GO:0010444: guard mother cell differentiation5.44E-03
130GO:0010103: stomatal complex morphogenesis5.44E-03
131GO:0009742: brassinosteroid mediated signaling pathway5.46E-03
132GO:0051607: defense response to virus6.08E-03
133GO:0000910: cytokinesis6.08E-03
134GO:0001522: pseudouridine synthesis6.32E-03
135GO:0009850: auxin metabolic process6.32E-03
136GO:0009704: de-etiolation6.32E-03
137GO:0030162: regulation of proteolysis6.32E-03
138GO:0006353: DNA-templated transcription, termination6.32E-03
139GO:0048766: root hair initiation6.32E-03
140GO:0070413: trehalose metabolism in response to stress6.32E-03
141GO:0006002: fructose 6-phosphate metabolic process7.25E-03
142GO:0071482: cellular response to light stimulus7.25E-03
143GO:0001558: regulation of cell growth7.25E-03
144GO:0009827: plant-type cell wall modification7.25E-03
145GO:0010052: guard cell differentiation7.25E-03
146GO:0009097: isoleucine biosynthetic process7.25E-03
147GO:0010497: plasmodesmata-mediated intercellular transport7.25E-03
148GO:0010411: xyloglucan metabolic process7.59E-03
149GO:0009051: pentose-phosphate shunt, oxidative branch8.22E-03
150GO:2000024: regulation of leaf development8.22E-03
151GO:0048481: plant ovule development8.42E-03
152GO:0009638: phototropism9.24E-03
153GO:0042761: very long-chain fatty acid biosynthetic process9.24E-03
154GO:0035999: tetrahydrofolate interconversion9.24E-03
155GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.24E-03
156GO:0007623: circadian rhythm1.02E-02
157GO:0009641: shade avoidance1.03E-02
158GO:0006298: mismatch repair1.03E-02
159GO:0006259: DNA metabolic process1.03E-02
160GO:0030422: production of siRNA involved in RNA interference1.03E-02
161GO:0048829: root cap development1.03E-02
162GO:0010015: root morphogenesis1.14E-02
163GO:0006265: DNA topological change1.14E-02
164GO:0009089: lysine biosynthetic process via diaminopimelate1.14E-02
165GO:0006816: calcium ion transport1.14E-02
166GO:0006352: DNA-templated transcription, initiation1.14E-02
167GO:0016024: CDP-diacylglycerol biosynthetic process1.26E-02
168GO:0045037: protein import into chloroplast stroma1.26E-02
169GO:0008380: RNA splicing1.28E-02
170GO:0050826: response to freezing1.38E-02
171GO:0010075: regulation of meristem growth1.38E-02
172GO:0009767: photosynthetic electron transport chain1.38E-02
173GO:0006006: glucose metabolic process1.38E-02
174GO:0009785: blue light signaling pathway1.38E-02
175GO:0009691: cytokinin biosynthetic process1.38E-02
176GO:0042546: cell wall biogenesis1.44E-02
177GO:0009934: regulation of meristem structural organization1.50E-02
178GO:0010207: photosystem II assembly1.50E-02
179GO:0006541: glutamine metabolic process1.50E-02
180GO:0010223: secondary shoot formation1.50E-02
181GO:0070588: calcium ion transmembrane transport1.62E-02
182GO:0006071: glycerol metabolic process1.76E-02
183GO:0005992: trehalose biosynthetic process1.89E-02
184GO:0051017: actin filament bundle assembly1.89E-02
185GO:0006825: copper ion transport2.03E-02
186GO:0051302: regulation of cell division2.03E-02
187GO:0006418: tRNA aminoacylation for protein translation2.03E-02
188GO:0006417: regulation of translation2.07E-02
189GO:0009909: regulation of flower development2.07E-02
190GO:0006306: DNA methylation2.17E-02
191GO:0016998: cell wall macromolecule catabolic process2.17E-02
192GO:0048366: leaf development2.18E-02
193GO:0006096: glycolytic process2.21E-02
194GO:0048367: shoot system development2.28E-02
195GO:0048316: seed development2.28E-02
196GO:0031348: negative regulation of defense response2.31E-02
197GO:0080167: response to karrikin2.33E-02
198GO:0010227: floral organ abscission2.46E-02
199GO:0071215: cellular response to abscisic acid stimulus2.46E-02
200GO:0071555: cell wall organization2.48E-02
201GO:0006355: regulation of transcription, DNA-templated2.52E-02
202GO:0009553: embryo sac development2.58E-02
203GO:0010089: xylem development2.61E-02
204GO:0042127: regulation of cell proliferation2.61E-02
205GO:0070417: cellular response to cold2.77E-02
206GO:0048653: anther development2.92E-02
207GO:0000226: microtubule cytoskeleton organization2.92E-02
208GO:0010087: phloem or xylem histogenesis2.92E-02
209GO:0016567: protein ubiquitination2.95E-02
210GO:0009733: response to auxin3.01E-02
211GO:0048868: pollen tube development3.08E-02
212GO:0006342: chromatin silencing3.08E-02
213GO:0009958: positive gravitropism3.08E-02
214GO:0006662: glycerol ether metabolic process3.08E-02
215GO:0010305: leaf vascular tissue pattern formation3.08E-02
216GO:0007059: chromosome segregation3.25E-02
217GO:0007018: microtubule-based movement3.25E-02
218GO:0048825: cotyledon development3.41E-02
219GO:0008654: phospholipid biosynthetic process3.41E-02
220GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.58E-02
221GO:0009630: gravitropism3.75E-02
222GO:0009790: embryo development3.88E-02
223GO:0009793: embryo development ending in seed dormancy4.14E-02
224GO:0007267: cell-cell signaling4.29E-02
225GO:0016310: phosphorylation4.60E-02
226GO:0001666: response to hypoxia4.65E-02
227GO:0010027: thylakoid membrane organization4.65E-02
228GO:0010029: regulation of seed germination4.84E-02
229GO:0009816: defense response to bacterium, incompatible interaction4.84E-02
RankGO TermAdjusted P value
1GO:0019136: deoxynucleoside kinase activity0.00E+00
2GO:0004056: argininosuccinate lyase activity0.00E+00
3GO:0009672: auxin:proton symporter activity3.17E-05
4GO:0019199: transmembrane receptor protein kinase activity7.81E-05
5GO:0010329: auxin efflux transmembrane transporter activity7.95E-05
6GO:0005524: ATP binding1.34E-04
7GO:0004519: endonuclease activity1.85E-04
8GO:0042834: peptidoglycan binding3.55E-04
9GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity3.55E-04
10GO:0004008: copper-exporting ATPase activity3.55E-04
11GO:0004071: aspartate-ammonia ligase activity3.55E-04
12GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.55E-04
13GO:0004830: tryptophan-tRNA ligase activity3.55E-04
14GO:0010285: L,L-diaminopimelate aminotransferase activity3.55E-04
15GO:0052381: tRNA dimethylallyltransferase activity3.55E-04
16GO:0004160: dihydroxy-acid dehydratase activity3.55E-04
17GO:0004674: protein serine/threonine kinase activity4.71E-04
18GO:0004672: protein kinase activity7.47E-04
19GO:0015929: hexosaminidase activity7.72E-04
20GO:0004563: beta-N-acetylhexosaminidase activity7.72E-04
21GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity7.72E-04
22GO:0009884: cytokinin receptor activity7.72E-04
23GO:0035241: protein-arginine omega-N monomethyltransferase activity7.72E-04
24GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity7.72E-04
25GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity7.72E-04
26GO:0008469: histone-arginine N-methyltransferase activity1.25E-03
27GO:0070330: aromatase activity1.25E-03
28GO:0032549: ribonucleoside binding1.25E-03
29GO:0017150: tRNA dihydrouridine synthase activity1.25E-03
30GO:0042781: 3'-tRNA processing endoribonuclease activity1.25E-03
31GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.25E-03
32GO:0005034: osmosensor activity1.25E-03
33GO:0019843: rRNA binding1.30E-03
34GO:0001872: (1->3)-beta-D-glucan binding1.80E-03
35GO:0035197: siRNA binding1.80E-03
36GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.91E-03
37GO:0016279: protein-lysine N-methyltransferase activity2.42E-03
38GO:0001053: plastid sigma factor activity2.42E-03
39GO:0004845: uracil phosphoribosyltransferase activity2.42E-03
40GO:0004345: glucose-6-phosphate dehydrogenase activity2.42E-03
41GO:0016836: hydro-lyase activity2.42E-03
42GO:0016987: sigma factor activity2.42E-03
43GO:0005253: anion channel activity2.42E-03
44GO:0042277: peptide binding2.42E-03
45GO:0003727: single-stranded RNA binding2.86E-03
46GO:0004372: glycine hydroxymethyltransferase activity3.09E-03
47GO:0018685: alkane 1-monooxygenase activity3.09E-03
48GO:0016773: phosphotransferase activity, alcohol group as acceptor3.09E-03
49GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.09E-03
50GO:0008519: ammonium transmembrane transporter activity3.82E-03
51GO:0005247: voltage-gated chloride channel activity3.82E-03
52GO:0030983: mismatched DNA binding3.82E-03
53GO:0004605: phosphatidate cytidylyltransferase activity3.82E-03
54GO:1990714: hydroxyproline O-galactosyltransferase activity3.82E-03
55GO:0019901: protein kinase binding4.16E-03
56GO:0016762: xyloglucan:xyloglucosyl transferase activity4.45E-03
57GO:0008195: phosphatidate phosphatase activity4.60E-03
58GO:0004849: uridine kinase activity4.60E-03
59GO:0019900: kinase binding4.60E-03
60GO:0000156: phosphorelay response regulator activity5.07E-03
61GO:0003872: 6-phosphofructokinase activity5.44E-03
62GO:0016301: kinase activity6.08E-03
63GO:0043022: ribosome binding6.32E-03
64GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity7.25E-03
65GO:0005375: copper ion transmembrane transporter activity7.25E-03
66GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity7.25E-03
67GO:0016798: hydrolase activity, acting on glycosyl bonds7.59E-03
68GO:0042803: protein homodimerization activity8.12E-03
69GO:0008889: glycerophosphodiester phosphodiesterase activity8.22E-03
70GO:0004713: protein tyrosine kinase activity1.03E-02
71GO:0004673: protein histidine kinase activity1.03E-02
72GO:0004805: trehalose-phosphatase activity1.03E-02
73GO:0008017: microtubule binding1.08E-02
74GO:0003723: RNA binding1.08E-02
75GO:0001054: RNA polymerase I activity1.14E-02
76GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.20E-02
77GO:0051539: 4 iron, 4 sulfur cluster binding1.22E-02
78GO:0004521: endoribonuclease activity1.26E-02
79GO:0005507: copper ion binding1.36E-02
80GO:0000155: phosphorelay sensor kinase activity1.38E-02
81GO:0005262: calcium channel activity1.38E-02
82GO:0009982: pseudouridine synthase activity1.38E-02
83GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.38E-02
84GO:0043621: protein self-association1.50E-02
85GO:0008168: methyltransferase activity1.69E-02
86GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.87E-02
87GO:0003690: double-stranded DNA binding1.93E-02
88GO:0005515: protein binding1.96E-02
89GO:0016887: ATPase activity2.01E-02
90GO:0043424: protein histidine kinase binding2.03E-02
91GO:0005345: purine nucleobase transmembrane transporter activity2.03E-02
92GO:0003777: microtubule motor activity2.07E-02
93GO:0031625: ubiquitin protein ligase binding2.07E-02
94GO:0035251: UDP-glucosyltransferase activity2.17E-02
95GO:0004176: ATP-dependent peptidase activity2.17E-02
96GO:0033612: receptor serine/threonine kinase binding2.17E-02
97GO:0004650: polygalacturonase activity2.43E-02
98GO:0004812: aminoacyl-tRNA ligase activity2.77E-02
99GO:0047134: protein-disulfide reductase activity2.77E-02
100GO:0005215: transporter activity2.94E-02
101GO:0003713: transcription coactivator activity3.08E-02
102GO:0004871: signal transducer activity3.09E-02
103GO:0004791: thioredoxin-disulfide reductase activity3.25E-02
104GO:0016829: lyase activity3.60E-02
105GO:0004252: serine-type endopeptidase activity3.69E-02
106GO:0030170: pyridoxal phosphate binding3.69E-02
107GO:0051015: actin filament binding3.93E-02
108GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.93E-02
109GO:0046983: protein dimerization activity4.01E-02
110GO:0016759: cellulose synthase activity4.11E-02
111GO:0003684: damaged DNA binding4.11E-02
112GO:0016791: phosphatase activity4.11E-02
113GO:0009055: electron carrier activity4.12E-02
114GO:0008483: transaminase activity4.29E-02
115GO:0016722: oxidoreductase activity, oxidizing metal ions4.29E-02
116GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.29E-02
117GO:0008237: metallopeptidase activity4.29E-02
118GO:0016597: amino acid binding4.47E-02
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Gene type



Gene DE type