Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G14150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
2GO:0090071: negative regulation of ribosome biogenesis0.00E+00
3GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
4GO:0044249: cellular biosynthetic process0.00E+00
5GO:0090042: tubulin deacetylation0.00E+00
6GO:1905177: tracheary element differentiation0.00E+00
7GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
8GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
9GO:0006429: leucyl-tRNA aminoacylation0.00E+00
10GO:1905421: regulation of plant organ morphogenesis0.00E+00
11GO:0030155: regulation of cell adhesion0.00E+00
12GO:0009657: plastid organization3.40E-09
13GO:0009658: chloroplast organization4.47E-07
14GO:0042793: transcription from plastid promoter3.80E-06
15GO:0042026: protein refolding6.54E-06
16GO:1900871: chloroplast mRNA modification6.94E-06
17GO:0009793: embryo development ending in seed dormancy4.52E-05
18GO:0010306: rhamnogalacturonan II biosynthetic process5.29E-05
19GO:0016556: mRNA modification5.29E-05
20GO:0010027: thylakoid membrane organization1.21E-04
21GO:0006418: tRNA aminoacylation for protein translation2.25E-04
22GO:0006458: 'de novo' protein folding2.80E-04
23GO:2000025: regulation of leaf formation3.94E-04
24GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.94E-04
25GO:0000476: maturation of 4.5S rRNA3.94E-04
26GO:0000967: rRNA 5'-end processing3.94E-04
27GO:0051418: microtubule nucleation by microtubule organizing center3.94E-04
28GO:0006438: valyl-tRNA aminoacylation3.94E-04
29GO:0070509: calcium ion import3.94E-04
30GO:0019478: D-amino acid catabolic process3.94E-04
31GO:0042547: cell wall modification involved in multidimensional cell growth3.94E-04
32GO:0042371: vitamin K biosynthetic process3.94E-04
33GO:0006436: tryptophanyl-tRNA aminoacylation3.94E-04
34GO:0034080: CENP-A containing nucleosome assembly3.94E-04
35GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.94E-04
36GO:0006419: alanyl-tRNA aminoacylation3.94E-04
37GO:0009790: embryo development4.20E-04
38GO:0006353: DNA-templated transcription, termination4.53E-04
39GO:0048868: pollen tube development4.97E-04
40GO:1900865: chloroplast RNA modification7.83E-04
41GO:0033566: gamma-tubulin complex localization8.55E-04
42GO:0060359: response to ammonium ion8.55E-04
43GO:0018026: peptidyl-lysine monomethylation8.55E-04
44GO:0009220: pyrimidine ribonucleotide biosynthetic process8.55E-04
45GO:0001682: tRNA 5'-leader removal8.55E-04
46GO:0034470: ncRNA processing8.55E-04
47GO:0006415: translational termination1.05E-03
48GO:0005975: carbohydrate metabolic process1.22E-03
49GO:2000012: regulation of auxin polar transport1.36E-03
50GO:0006954: inflammatory response1.39E-03
51GO:0010623: programmed cell death involved in cell development1.39E-03
52GO:0043157: response to cation stress1.39E-03
53GO:0005977: glycogen metabolic process1.39E-03
54GO:0007052: mitotic spindle organization1.39E-03
55GO:0045910: negative regulation of DNA recombination1.39E-03
56GO:0048281: inflorescence morphogenesis1.39E-03
57GO:0071732: cellular response to nitric oxide1.71E-03
58GO:0090307: mitotic spindle assembly2.00E-03
59GO:0010148: transpiration2.00E-03
60GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center2.00E-03
61GO:0034508: centromere complex assembly2.00E-03
62GO:0051085: chaperone mediated protein folding requiring cofactor2.00E-03
63GO:0010239: chloroplast mRNA processing2.00E-03
64GO:0061077: chaperone-mediated protein folding2.57E-03
65GO:0022622: root system development2.69E-03
66GO:0010508: positive regulation of autophagy2.69E-03
67GO:0044205: 'de novo' UMP biosynthetic process2.69E-03
68GO:0010021: amylopectin biosynthetic process2.69E-03
69GO:0051781: positive regulation of cell division2.69E-03
70GO:0042274: ribosomal small subunit biogenesis2.69E-03
71GO:0006730: one-carbon metabolic process2.81E-03
72GO:0007005: mitochondrion organization2.81E-03
73GO:0071369: cellular response to ethylene stimulus3.07E-03
74GO:0032543: mitochondrial translation3.44E-03
75GO:0010236: plastoquinone biosynthetic process3.44E-03
76GO:0009107: lipoate biosynthetic process3.44E-03
77GO:0010158: abaxial cell fate specification3.44E-03
78GO:0009664: plant-type cell wall organization3.61E-03
79GO:0008033: tRNA processing3.91E-03
80GO:0006655: phosphatidylglycerol biosynthetic process4.26E-03
81GO:0032973: amino acid export4.26E-03
82GO:0009959: negative gravitropism4.26E-03
83GO:0019252: starch biosynthetic process4.86E-03
84GO:0009733: response to auxin5.03E-03
85GO:0042372: phylloquinone biosynthetic process5.13E-03
86GO:0017148: negative regulation of translation5.13E-03
87GO:0009942: longitudinal axis specification5.13E-03
88GO:1901259: chloroplast rRNA processing5.13E-03
89GO:0080086: stamen filament development5.13E-03
90GO:0009648: photoperiodism5.13E-03
91GO:0019509: L-methionine salvage from methylthioadenosine5.13E-03
92GO:0010583: response to cyclopentenone5.56E-03
93GO:0009630: gravitropism5.56E-03
94GO:0071281: cellular response to iron ion5.93E-03
95GO:0010050: vegetative phase change6.06E-03
96GO:0070370: cellular heat acclimation6.06E-03
97GO:0010444: guard mother cell differentiation6.06E-03
98GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process6.06E-03
99GO:0006400: tRNA modification6.06E-03
100GO:0010103: stomatal complex morphogenesis6.06E-03
101GO:0032880: regulation of protein localization6.06E-03
102GO:0048528: post-embryonic root development6.06E-03
103GO:0009772: photosynthetic electron transport in photosystem II6.06E-03
104GO:0043090: amino acid import6.06E-03
105GO:0010252: auxin homeostasis6.31E-03
106GO:0009828: plant-type cell wall loosening6.31E-03
107GO:0009734: auxin-activated signaling pathway6.49E-03
108GO:0009850: auxin metabolic process7.05E-03
109GO:0046620: regulation of organ growth7.05E-03
110GO:0070413: trehalose metabolism in response to stress7.05E-03
111GO:0031540: regulation of anthocyanin biosynthetic process7.05E-03
112GO:0000105: histidine biosynthetic process7.05E-03
113GO:0048564: photosystem I assembly7.05E-03
114GO:0001558: regulation of cell growth8.09E-03
115GO:0032544: plastid translation8.09E-03
116GO:0007389: pattern specification process8.09E-03
117GO:0006098: pentose-phosphate shunt9.18E-03
118GO:0080144: amino acid homeostasis9.18E-03
119GO:0006783: heme biosynthetic process9.18E-03
120GO:0000373: Group II intron splicing9.18E-03
121GO:0000902: cell morphogenesis9.18E-03
122GO:0031425: chloroplast RNA processing1.03E-02
123GO:0006779: porphyrin-containing compound biosynthetic process1.03E-02
124GO:0006782: protoporphyrinogen IX biosynthetic process1.15E-02
125GO:0006535: cysteine biosynthetic process from serine1.15E-02
126GO:0045036: protein targeting to chloroplast1.15E-02
127GO:0006298: mismatch repair1.15E-02
128GO:0006949: syncytium formation1.15E-02
129GO:0006259: DNA metabolic process1.15E-02
130GO:0040008: regulation of growth1.17E-02
131GO:0006265: DNA topological change1.28E-02
132GO:0009073: aromatic amino acid family biosynthetic process1.28E-02
133GO:0009451: RNA modification1.28E-02
134GO:0010015: root morphogenesis1.28E-02
135GO:0005983: starch catabolic process1.41E-02
136GO:0016024: CDP-diacylglycerol biosynthetic process1.41E-02
137GO:0045037: protein import into chloroplast stroma1.41E-02
138GO:0010582: floral meristem determinacy1.41E-02
139GO:0009691: cytokinin biosynthetic process1.54E-02
140GO:0010229: inflorescence development1.54E-02
141GO:0050826: response to freezing1.54E-02
142GO:0006094: gluconeogenesis1.54E-02
143GO:0009926: auxin polar transport1.62E-02
144GO:0010207: photosystem II assembly1.68E-02
145GO:0010020: chloroplast fission1.68E-02
146GO:0048467: gynoecium development1.68E-02
147GO:0009965: leaf morphogenesis1.82E-02
148GO:0090351: seedling development1.82E-02
149GO:0070588: calcium ion transmembrane transport1.82E-02
150GO:0042023: DNA endoreduplication1.96E-02
151GO:0000162: tryptophan biosynthetic process1.96E-02
152GO:0009944: polarity specification of adaxial/abaxial axis2.11E-02
153GO:0030150: protein import into mitochondrial matrix2.11E-02
154GO:0007010: cytoskeleton organization2.11E-02
155GO:0005992: trehalose biosynthetic process2.11E-02
156GO:0019344: cysteine biosynthetic process2.11E-02
157GO:0009116: nucleoside metabolic process2.11E-02
158GO:0006364: rRNA processing2.19E-02
159GO:0051603: proteolysis involved in cellular protein catabolic process2.26E-02
160GO:0016575: histone deacetylation2.27E-02
161GO:0051302: regulation of cell division2.27E-02
162GO:0019953: sexual reproduction2.27E-02
163GO:0016998: cell wall macromolecule catabolic process2.43E-02
164GO:0015992: proton transport2.43E-02
165GO:0009814: defense response, incompatible interaction2.59E-02
166GO:0016226: iron-sulfur cluster assembly2.59E-02
167GO:0031348: negative regulation of defense response2.59E-02
168GO:0048366: leaf development2.66E-02
169GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.75E-02
170GO:0001944: vasculature development2.75E-02
171GO:0080167: response to karrikin2.84E-02
172GO:0010089: xylem development2.92E-02
173GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.09E-02
174GO:0008284: positive regulation of cell proliferation3.09E-02
175GO:0009416: response to light stimulus3.10E-02
176GO:0006396: RNA processing3.21E-02
177GO:0071555: cell wall organization3.23E-02
178GO:0000226: microtubule cytoskeleton organization3.27E-02
179GO:0048653: anther development3.27E-02
180GO:0009958: positive gravitropism3.45E-02
181GO:0006662: glycerol ether metabolic process3.45E-02
182GO:0048544: recognition of pollen3.63E-02
183GO:0007059: chromosome segregation3.63E-02
184GO:0008654: phospholipid biosynthetic process3.82E-02
185GO:0000302: response to reactive oxygen species4.01E-02
186GO:0002229: defense response to oomycetes4.01E-02
187GO:0006508: proteolysis4.13E-02
188GO:1901657: glycosyl compound metabolic process4.39E-02
189GO:0006464: cellular protein modification process4.59E-02
190GO:0006413: translational initiation4.99E-02
RankGO TermAdjusted P value
1GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
2GO:0010303: limit dextrinase activity0.00E+00
3GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
4GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
5GO:0051721: protein phosphatase 2A binding0.00E+00
6GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
7GO:0042903: tubulin deacetylase activity0.00E+00
8GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
9GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
10GO:0043014: alpha-tubulin binding0.00E+00
11GO:0051060: pullulanase activity0.00E+00
12GO:0004418: hydroxymethylbilane synthase activity0.00E+00
13GO:0004823: leucine-tRNA ligase activity0.00E+00
14GO:0015267: channel activity0.00E+00
15GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
16GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.94E-06
17GO:0016149: translation release factor activity, codon specific5.29E-05
18GO:0044183: protein binding involved in protein folding6.63E-05
19GO:0004556: alpha-amylase activity2.07E-04
20GO:0004176: ATP-dependent peptidase activity2.56E-04
21GO:0003723: RNA binding2.97E-04
22GO:0004813: alanine-tRNA ligase activity3.94E-04
23GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity3.94E-04
24GO:0052381: tRNA dimethylallyltransferase activity3.94E-04
25GO:0004832: valine-tRNA ligase activity3.94E-04
26GO:0004830: tryptophan-tRNA ligase activity3.94E-04
27GO:0005227: calcium activated cation channel activity3.94E-04
28GO:0004812: aminoacyl-tRNA ligase activity4.06E-04
29GO:0003747: translation release factor activity6.63E-04
30GO:0019156: isoamylase activity8.55E-04
31GO:0017118: lipoyltransferase activity8.55E-04
32GO:0016415: octanoyltransferase activity8.55E-04
33GO:0004047: aminomethyltransferase activity8.55E-04
34GO:0008237: metallopeptidase activity8.95E-04
35GO:0004519: endonuclease activity1.09E-03
36GO:0002161: aminoacyl-tRNA editing activity1.39E-03
37GO:0004557: alpha-galactosidase activity1.39E-03
38GO:0052692: raffinose alpha-galactosidase activity1.39E-03
39GO:0019201: nucleotide kinase activity2.00E-03
40GO:0009678: hydrogen-translocating pyrophosphatase activity2.00E-03
41GO:0048487: beta-tubulin binding2.00E-03
42GO:0043023: ribosomal large subunit binding2.00E-03
43GO:0001872: (1->3)-beta-D-glucan binding2.00E-03
44GO:0016887: ATPase activity2.21E-03
45GO:0043015: gamma-tubulin binding2.69E-03
46GO:0019199: transmembrane receptor protein kinase activity2.69E-03
47GO:0042277: peptide binding2.69E-03
48GO:0004659: prenyltransferase activity2.69E-03
49GO:0016279: protein-lysine N-methyltransferase activity2.69E-03
50GO:0004045: aminoacyl-tRNA hydrolase activity2.69E-03
51GO:0043621: protein self-association2.98E-03
52GO:0016773: phosphotransferase activity, alcohol group as acceptor3.44E-03
53GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.44E-03
54GO:0030983: mismatched DNA binding4.26E-03
55GO:0004605: phosphatidate cytidylyltransferase activity4.26E-03
56GO:0080030: methyl indole-3-acetate esterase activity4.26E-03
57GO:0004332: fructose-bisphosphate aldolase activity4.26E-03
58GO:0004526: ribonuclease P activity4.26E-03
59GO:0004017: adenylate kinase activity5.13E-03
60GO:0004124: cysteine synthase activity5.13E-03
61GO:0008195: phosphatidate phosphatase activity5.13E-03
62GO:0004427: inorganic diphosphatase activity6.06E-03
63GO:0051082: unfolded protein binding6.19E-03
64GO:0003684: damaged DNA binding6.31E-03
65GO:0043022: ribosome binding7.05E-03
66GO:0016597: amino acid binding7.12E-03
67GO:0005525: GTP binding7.70E-03
68GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)8.09E-03
69GO:0008173: RNA methyltransferase activity8.09E-03
70GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity8.09E-03
71GO:0019843: rRNA binding8.26E-03
72GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.86E-03
73GO:0009672: auxin:proton symporter activity1.03E-02
74GO:0004222: metalloendopeptidase activity1.09E-02
75GO:0004805: trehalose-phosphatase activity1.15E-02
76GO:0003924: GTPase activity1.32E-02
77GO:0000049: tRNA binding1.41E-02
78GO:0004565: beta-galactosidase activity1.54E-02
79GO:0010329: auxin efflux transmembrane transporter activity1.54E-02
80GO:0015266: protein channel activity1.54E-02
81GO:0005262: calcium channel activity1.54E-02
82GO:0004185: serine-type carboxypeptidase activity1.62E-02
83GO:0008083: growth factor activity1.68E-02
84GO:0004535: poly(A)-specific ribonuclease activity1.68E-02
85GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.68E-02
86GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.96E-02
87GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.96E-02
88GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.96E-02
89GO:0003887: DNA-directed DNA polymerase activity1.96E-02
90GO:0004407: histone deacetylase activity2.11E-02
91GO:0008408: 3'-5' exonuclease activity2.43E-02
92GO:0030570: pectate lyase activity2.75E-02
93GO:0004650: polygalacturonase activity2.84E-02
94GO:0047134: protein-disulfide reductase activity3.09E-02
95GO:0004527: exonuclease activity3.45E-02
96GO:0008536: Ran GTPase binding3.45E-02
97GO:0004791: thioredoxin-disulfide reductase activity3.63E-02
98GO:0016853: isomerase activity3.63E-02
99GO:0016762: xyloglucan:xyloglucosyl transferase activity4.01E-02
100GO:0004518: nuclease activity4.20E-02
101GO:0016829: lyase activity4.21E-02
102GO:0000156: phosphorelay response regulator activity4.39E-02
103GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.39E-02
104GO:0016791: phosphatase activity4.59E-02
105GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.63E-02
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Gene type



Gene DE type