co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G13910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
2	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
6	GO:0002764: immune response-regulating signaling pathway	0.00E+00
7	GO:0006983: ER overload response	0.00E+00
8	GO:1902009: positive regulation of toxin transport	0.00E+00
9	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
10	GO:0010324: membrane invagination	0.00E+00
11	GO:0071327: cellular response to trehalose stimulus	0.00E+00
12	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
13	GO:0010647: positive regulation of cell communication	0.00E+00
14	GO:0010200: response to chitin	1.25E-12
15	GO:0009617: response to bacterium	4.75E-08
16	GO:0060548: negative regulation of cell death	1.60E-06
17	GO:0009751: response to salicylic acid	2.49E-06
18	GO:0019725: cellular homeostasis	1.06E-05
19	GO:0006468: protein phosphorylation	2.64E-05
20	GO:0031348: negative regulation of defense response	3.38E-05
21	GO:0006979: response to oxidative stress	9.49E-05
22	GO:0009266: response to temperature stimulus	1.94E-04
23	GO:0045927: positive regulation of growth	2.07E-04
24	GO:0010225: response to UV-C	2.07E-04
25	GO:0009816: defense response to bacterium, incompatible interaction	2.37E-04
26	GO:0009759: indole glucosinolate biosynthetic process	2.93E-04
27	GO:0009626: plant-type hypersensitive response	3.06E-04
28	GO:0042742: defense response to bacterium	3.30E-04
29	GO:0042350: GDP-L-fucose biosynthetic process	4.92E-04
30	GO:0019567: arabinose biosynthetic process	4.92E-04
31	GO:0015969: guanosine tetraphosphate metabolic process	4.92E-04
32	GO:0009609: response to symbiotic bacterium	4.92E-04
33	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.92E-04
34	GO:1901430: positive regulation of syringal lignin biosynthetic process	4.92E-04
35	GO:0010482: regulation of epidermal cell division	4.92E-04
36	GO:1901183: positive regulation of camalexin biosynthetic process	4.92E-04
37	GO:0009270: response to humidity	4.92E-04
38	GO:0032469: endoplasmic reticulum calcium ion homeostasis	4.92E-04
39	GO:0050691: regulation of defense response to virus by host	4.92E-04
40	GO:0006643: membrane lipid metabolic process	4.92E-04
41	GO:0051938: L-glutamate import	4.92E-04
42	GO:1900056: negative regulation of leaf senescence	5.03E-04
43	GO:0035556: intracellular signal transduction	6.06E-04
44	GO:1900150: regulation of defense response to fungus	6.27E-04
45	GO:0010112: regulation of systemic acquired resistance	9.13E-04
46	GO:0010150: leaf senescence	1.03E-03
47	GO:0000719: photoreactive repair	1.06E-03
48	GO:0043066: negative regulation of apoptotic process	1.06E-03
49	GO:0044419: interspecies interaction between organisms	1.06E-03
50	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.06E-03
51	GO:0031349: positive regulation of defense response	1.06E-03
52	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	1.06E-03
53	GO:0043091: L-arginine import	1.06E-03
54	GO:0031204: posttranslational protein targeting to membrane, translocation	1.06E-03
55	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.06E-03
56	GO:0009838: abscission	1.06E-03
57	GO:0015802: basic amino acid transport	1.06E-03
58	GO:0080185: effector dependent induction by symbiont of host immune response	1.06E-03
59	GO:0010618: aerenchyma formation	1.06E-03
60	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.08E-03
61	GO:1900426: positive regulation of defense response to bacterium	1.08E-03
62	GO:0009737: response to abscisic acid	1.08E-03
63	GO:0006032: chitin catabolic process	1.25E-03
64	GO:0006886: intracellular protein transport	1.26E-03
65	GO:0001666: response to hypoxia	1.57E-03
66	GO:0012501: programmed cell death	1.66E-03
67	GO:0008361: regulation of cell size	1.66E-03
68	GO:0009620: response to fungus	1.70E-03
69	GO:0009653: anatomical structure morphogenesis	1.73E-03
70	GO:0032786: positive regulation of DNA-templated transcription, elongation	1.73E-03
71	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.73E-03
72	GO:0016045: detection of bacterium	1.73E-03
73	GO:1900140: regulation of seedling development	1.73E-03
74	GO:0010359: regulation of anion channel activity	1.73E-03
75	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.73E-03
76	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.73E-03
77	GO:0002230: positive regulation of defense response to virus by host	1.73E-03
78	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.73E-03
79	GO:0044375: regulation of peroxisome size	1.73E-03
80	GO:0045793: positive regulation of cell size	1.73E-03
81	GO:0010186: positive regulation of cellular defense response	1.73E-03
82	GO:0002237: response to molecule of bacterial origin	2.13E-03
83	GO:0007034: vacuolar transport	2.13E-03
84	GO:0043207: response to external biotic stimulus	2.51E-03
85	GO:0072334: UDP-galactose transmembrane transport	2.51E-03
86	GO:0015749: monosaccharide transport	2.51E-03
87	GO:0009226: nucleotide-sugar biosynthetic process	2.51E-03
88	GO:0030100: regulation of endocytosis	2.51E-03
89	GO:0072583: clathrin-dependent endocytosis	2.51E-03
90	GO:0015696: ammonium transport	2.51E-03
91	GO:0048530: fruit morphogenesis	2.51E-03
92	GO:0051289: protein homotetramerization	2.51E-03
93	GO:1902290: positive regulation of defense response to oomycetes	2.51E-03
94	GO:0002679: respiratory burst involved in defense response	2.51E-03
95	GO:0034219: carbohydrate transmembrane transport	2.51E-03
96	GO:0007568: aging	2.66E-03
97	GO:1902584: positive regulation of response to water deprivation	3.38E-03
98	GO:0072488: ammonium transmembrane transport	3.38E-03
99	GO:0033358: UDP-L-arabinose biosynthetic process	3.38E-03
100	GO:0051567: histone H3-K9 methylation	3.38E-03
101	GO:0010188: response to microbial phytotoxin	3.38E-03
102	GO:0080142: regulation of salicylic acid biosynthetic process	3.38E-03
103	GO:0045227: capsule polysaccharide biosynthetic process	3.38E-03
104	GO:0046345: abscisic acid catabolic process	3.38E-03
105	GO:0010483: pollen tube reception	3.38E-03
106	GO:0009652: thigmotropism	3.38E-03
107	GO:0016192: vesicle-mediated transport	3.54E-03
108	GO:0016998: cell wall macromolecule catabolic process	3.58E-03
109	GO:0006952: defense response	3.63E-03
110	GO:0046777: protein autophosphorylation	3.65E-03
111	GO:0006897: endocytosis	3.73E-03
112	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.92E-03
113	GO:0071456: cellular response to hypoxia	3.92E-03
114	GO:0009625: response to insect	4.28E-03
115	GO:0006012: galactose metabolic process	4.28E-03
116	GO:0034052: positive regulation of plant-type hypersensitive response	4.33E-03
117	GO:0097428: protein maturation by iron-sulfur cluster transfer	4.33E-03
118	GO:0009306: protein secretion	4.66E-03
119	GO:1900425: negative regulation of defense response to bacterium	5.37E-03
120	GO:0006574: valine catabolic process	5.37E-03
121	GO:0010942: positive regulation of cell death	5.37E-03
122	GO:0006662: glycerol ether metabolic process	5.89E-03
123	GO:0046323: glucose import	5.89E-03
124	GO:0009809: lignin biosynthetic process	6.06E-03
125	GO:0042372: phylloquinone biosynthetic process	6.48E-03
126	GO:0045926: negative regulation of growth	6.48E-03
127	GO:0009612: response to mechanical stimulus	6.48E-03
128	GO:0034389: lipid particle organization	6.48E-03
129	GO:0048509: regulation of meristem development	6.48E-03
130	GO:0031930: mitochondria-nucleus signaling pathway	6.48E-03
131	GO:0010199: organ boundary specification between lateral organs and the meristem	6.48E-03
132	GO:0010555: response to mannitol	6.48E-03
133	GO:0010310: regulation of hydrogen peroxide metabolic process	6.48E-03
134	GO:2000067: regulation of root morphogenesis	6.48E-03
135	GO:0009749: response to glucose	6.80E-03
136	GO:0009753: response to jasmonic acid	7.27E-03
137	GO:0080186: developmental vegetative growth	7.66E-03
138	GO:1900057: positive regulation of leaf senescence	7.66E-03
139	GO:0050829: defense response to Gram-negative bacterium	7.66E-03
140	GO:0010044: response to aluminum ion	7.66E-03
141	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	7.66E-03
142	GO:0009610: response to symbiotic fungus	7.66E-03
143	GO:0046470: phosphatidylcholine metabolic process	7.66E-03
144	GO:0043090: amino acid import	7.66E-03
145	GO:0035265: organ growth	8.92E-03
146	GO:0009787: regulation of abscisic acid-activated signaling pathway	8.92E-03
147	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.92E-03
148	GO:0009819: drought recovery	8.92E-03
149	GO:0006605: protein targeting	8.92E-03
150	GO:0030162: regulation of proteolysis	8.92E-03
151	GO:0016559: peroxisome fission	8.92E-03
152	GO:0006904: vesicle docking involved in exocytosis	9.40E-03
153	GO:0018105: peptidyl-serine phosphorylation	9.88E-03
154	GO:0007186: G-protein coupled receptor signaling pathway	1.03E-02
155	GO:0010120: camalexin biosynthetic process	1.03E-02
156	GO:0010497: plasmodesmata-mediated intercellular transport	1.03E-02
157	GO:0010204: defense response signaling pathway, resistance gene-independent	1.03E-02
158	GO:0030968: endoplasmic reticulum unfolded protein response	1.03E-02
159	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.03E-02
160	GO:0010099: regulation of photomorphogenesis	1.03E-02
161	GO:0009821: alkaloid biosynthetic process	1.17E-02
162	GO:0051865: protein autoubiquitination	1.17E-02
163	GO:0006098: pentose-phosphate shunt	1.17E-02
164	GO:0009627: systemic acquired resistance	1.18E-02
165	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.28E-02
166	GO:0030042: actin filament depolymerization	1.31E-02
167	GO:0015031: protein transport	1.36E-02
168	GO:0008219: cell death	1.38E-02
169	GO:0006325: chromatin organization	1.46E-02
170	GO:0043069: negative regulation of programmed cell death	1.46E-02
171	GO:0019684: photosynthesis, light reaction	1.62E-02
172	GO:0009682: induced systemic resistance	1.62E-02
173	GO:0043085: positive regulation of catalytic activity	1.62E-02
174	GO:0052544: defense response by callose deposition in cell wall	1.62E-02
175	GO:0009750: response to fructose	1.62E-02
176	GO:0048765: root hair cell differentiation	1.62E-02
177	GO:0000038: very long-chain fatty acid metabolic process	1.62E-02
178	GO:0045892: negative regulation of transcription, DNA-templated	1.64E-02
179	GO:0002213: defense response to insect	1.79E-02
180	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.79E-02
181	GO:0009611: response to wounding	1.81E-02
182	GO:0034599: cellular response to oxidative stress	1.84E-02
183	GO:2000012: regulation of auxin polar transport	1.96E-02
184	GO:0055046: microgametogenesis	1.96E-02
185	GO:0009414: response to water deprivation	2.10E-02
186	GO:0006470: protein dephosphorylation	2.26E-02
187	GO:0007166: cell surface receptor signaling pathway	2.26E-02
188	GO:0009744: response to sucrose	2.27E-02
189	GO:0051707: response to other organism	2.27E-02
190	GO:0007031: peroxisome organization	2.31E-02
191	GO:0007030: Golgi organization	2.31E-02
192	GO:0046688: response to copper ion	2.31E-02
193	GO:0010167: response to nitrate	2.31E-02
194	GO:0010053: root epidermal cell differentiation	2.31E-02
195	GO:0009225: nucleotide-sugar metabolic process	2.31E-02
196	GO:0080147: root hair cell development	2.69E-02
197	GO:0009863: salicylic acid mediated signaling pathway	2.69E-02
198	GO:0030150: protein import into mitochondrial matrix	2.69E-02
199	GO:2000377: regulation of reactive oxygen species metabolic process	2.69E-02
200	GO:0031347: regulation of defense response	2.75E-02
201	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.75E-02
202	GO:0010026: trichome differentiation	2.89E-02
203	GO:0006825: copper ion transport	2.89E-02
204	GO:0051302: regulation of cell division	2.89E-02
205	GO:0019915: lipid storage	3.09E-02
206	GO:0048278: vesicle docking	3.09E-02
207	GO:0003333: amino acid transmembrane transport	3.09E-02
208	GO:0010431: seed maturation	3.09E-02
209	GO:0035428: hexose transmembrane transport	3.29E-02
210	GO:0030245: cellulose catabolic process	3.29E-02
211	GO:0007275: multicellular organism development	3.34E-02
212	GO:0009411: response to UV	3.50E-02
213	GO:0010089: xylem development	3.72E-02
214	GO:0007165: signal transduction	3.74E-02
215	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.94E-02
216	GO:0009723: response to ethylene	3.95E-02
217	GO:0000413: protein peptidyl-prolyl isomerization	4.16E-02
218	GO:0009741: response to brassinosteroid	4.39E-02
219	GO:0009742: brassinosteroid mediated signaling pathway	4.61E-02
220	GO:0061025: membrane fusion	4.62E-02
221	GO:0009646: response to absence of light	4.62E-02
222	GO:0008654: phospholipid biosynthetic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0004168: dolichol kinase activity	0.00E+00
4	GO:0008320: protein transmembrane transporter activity	2.50E-07
5	GO:0004672: protein kinase activity	1.06E-04
6	GO:0003978: UDP-glucose 4-epimerase activity	3.92E-04
7	GO:1901149: salicylic acid binding	4.92E-04
8	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	4.92E-04
9	GO:0050308: sugar-phosphatase activity	4.92E-04
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	4.92E-04
11	GO:2001147: camalexin binding	4.92E-04
12	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.92E-04
13	GO:0050577: GDP-L-fucose synthase activity	4.92E-04
14	GO:0009679: hexose:proton symporter activity	4.92E-04
15	GO:0032050: clathrin heavy chain binding	4.92E-04
16	GO:2001227: quercitrin binding	4.92E-04
17	GO:0016301: kinase activity	6.76E-04
18	GO:0015036: disulfide oxidoreductase activity	1.06E-03
19	GO:0008728: GTP diphosphokinase activity	1.06E-03
20	GO:0004568: chitinase activity	1.25E-03
21	GO:0004871: signal transducer activity	1.30E-03
22	GO:0016531: copper chaperone activity	1.73E-03
23	GO:0031683: G-protein beta/gamma-subunit complex binding	1.73E-03
24	GO:0001664: G-protein coupled receptor binding	1.73E-03
25	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.73E-03
26	GO:0008375: acetylglucosaminyltransferase activity	1.81E-03
27	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.81E-03
28	GO:0004806: triglyceride lipase activity	1.94E-03
29	GO:0004683: calmodulin-dependent protein kinase activity	1.94E-03
30	GO:0005509: calcium ion binding	2.38E-03
31	GO:0004674: protein serine/threonine kinase activity	2.47E-03
32	GO:0015181: arginine transmembrane transporter activity	2.51E-03
33	GO:0015189: L-lysine transmembrane transporter activity	2.51E-03
34	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.34E-03
35	GO:0005086: ARF guanyl-nucleotide exchange factor activity	3.38E-03
36	GO:0005313: L-glutamate transmembrane transporter activity	3.38E-03
37	GO:0019199: transmembrane receptor protein kinase activity	3.38E-03
38	GO:0000993: RNA polymerase II core binding	3.38E-03
39	GO:0050373: UDP-arabinose 4-epimerase activity	3.38E-03
40	GO:0033612: receptor serine/threonine kinase binding	3.58E-03
41	GO:0005459: UDP-galactose transmembrane transporter activity	4.33E-03
42	GO:0015145: monosaccharide transmembrane transporter activity	4.33E-03
43	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.33E-03
44	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.33E-03
45	GO:0010294: abscisic acid glucosyltransferase activity	4.33E-03
46	GO:0047134: protein-disulfide reductase activity	5.05E-03
47	GO:0008519: ammonium transmembrane transporter activity	5.37E-03
48	GO:0004605: phosphatidate cytidylyltransferase activity	5.37E-03
49	GO:0004791: thioredoxin-disulfide reductase activity	6.34E-03
50	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.48E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	6.48E-03
52	GO:0043295: glutathione binding	7.66E-03
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.31E-03
54	GO:0005544: calcium-dependent phospholipid binding	8.92E-03
55	GO:0004869: cysteine-type endopeptidase inhibitor activity	8.92E-03
56	GO:0004714: transmembrane receptor protein tyrosine kinase activity	8.92E-03
57	GO:0016746: transferase activity, transferring acyl groups	9.88E-03
58	GO:0015035: protein disulfide oxidoreductase activity	9.88E-03
59	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.03E-02
60	GO:0004630: phospholipase D activity	1.03E-02
61	GO:0015174: basic amino acid transmembrane transporter activity	1.31E-02
62	GO:0047617: acyl-CoA hydrolase activity	1.31E-02
63	GO:0016844: strictosidine synthase activity	1.31E-02
64	GO:0043565: sequence-specific DNA binding	1.34E-02
65	GO:0004864: protein phosphatase inhibitor activity	1.46E-02
66	GO:0004713: protein tyrosine kinase activity	1.46E-02
67	GO:0030234: enzyme regulator activity	1.46E-02
68	GO:0008171: O-methyltransferase activity	1.46E-02
69	GO:0008047: enzyme activator activity	1.46E-02
70	GO:0005543: phospholipid binding	1.62E-02
71	GO:0008794: arsenate reductase (glutaredoxin) activity	1.62E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.75E-02
73	GO:0003746: translation elongation factor activity	1.76E-02
74	GO:0015198: oligopeptide transporter activity	1.79E-02
75	GO:0005262: calcium channel activity	1.96E-02
76	GO:0051119: sugar transmembrane transporter activity	2.31E-02
77	GO:0005198: structural molecule activity	2.56E-02
78	GO:0042802: identical protein binding	2.58E-02
79	GO:0051536: iron-sulfur cluster binding	2.69E-02
80	GO:0031418: L-ascorbic acid binding	2.69E-02
81	GO:0043424: protein histidine kinase binding	2.89E-02
82	GO:0004707: MAP kinase activity	3.09E-02
83	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.09E-02
84	GO:0008234: cysteine-type peptidase activity	3.39E-02
85	GO:0015171: amino acid transmembrane transporter activity	3.39E-02
86	GO:0008810: cellulase activity	3.50E-02
87	GO:0005515: protein binding	3.54E-02
88	GO:0003727: single-stranded RNA binding	3.72E-02
89	GO:0005525: GTP binding	4.00E-02
90	GO:0005355: glucose transmembrane transporter activity	4.62E-02
91	GO:0050662: coenzyme binding	4.62E-02
92	GO:0016853: isomerase activity	4.62E-02