GO Enrichment Analysis of Co-expressed Genes with
AT3G13360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 2 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 3 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 4 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 5 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 6 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 7 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 8 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 9 | GO:0045176: apical protein localization | 0.00E+00 |
| 10 | GO:0071000: response to magnetism | 0.00E+00 |
| 11 | GO:0031129: inductive cell-cell signaling | 0.00E+00 |
| 12 | GO:0010068: protoderm histogenesis | 0.00E+00 |
| 13 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 14 | GO:0006166: purine ribonucleoside salvage | 2.19E-05 |
| 15 | GO:0006168: adenine salvage | 2.19E-05 |
| 16 | GO:1902183: regulation of shoot apical meristem development | 6.36E-05 |
| 17 | GO:0044209: AMP salvage | 6.36E-05 |
| 18 | GO:0010158: abaxial cell fate specification | 6.36E-05 |
| 19 | GO:0046283: anthocyanin-containing compound metabolic process | 6.36E-05 |
| 20 | GO:0007155: cell adhesion | 2.16E-04 |
| 21 | GO:0072387: flavin adenine dinucleotide metabolic process | 2.39E-04 |
| 22 | GO:0006177: GMP biosynthetic process | 2.39E-04 |
| 23 | GO:0010450: inflorescence meristem growth | 2.39E-04 |
| 24 | GO:1902265: abscisic acid homeostasis | 2.39E-04 |
| 25 | GO:0010482: regulation of epidermal cell division | 2.39E-04 |
| 26 | GO:0071028: nuclear mRNA surveillance | 2.39E-04 |
| 27 | GO:2000024: regulation of leaf development | 3.23E-04 |
| 28 | GO:0009638: phototropism | 3.83E-04 |
| 29 | GO:0031125: rRNA 3'-end processing | 5.29E-04 |
| 30 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 5.29E-04 |
| 31 | GO:0010343: singlet oxygen-mediated programmed cell death | 5.29E-04 |
| 32 | GO:0034475: U4 snRNA 3'-end processing | 5.29E-04 |
| 33 | GO:1901529: positive regulation of anion channel activity | 5.29E-04 |
| 34 | GO:2000039: regulation of trichome morphogenesis | 5.29E-04 |
| 35 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 5.29E-04 |
| 36 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.29E-04 |
| 37 | GO:1900871: chloroplast mRNA modification | 5.29E-04 |
| 38 | GO:0010617: circadian regulation of calcium ion oscillation | 5.29E-04 |
| 39 | GO:0007154: cell communication | 5.29E-04 |
| 40 | GO:0099402: plant organ development | 5.29E-04 |
| 41 | GO:1900033: negative regulation of trichome patterning | 5.29E-04 |
| 42 | GO:0042814: monopolar cell growth | 5.29E-04 |
| 43 | GO:0045165: cell fate commitment | 8.60E-04 |
| 44 | GO:0016075: rRNA catabolic process | 8.60E-04 |
| 45 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 8.60E-04 |
| 46 | GO:0031022: nuclear migration along microfilament | 8.60E-04 |
| 47 | GO:0051127: positive regulation of actin nucleation | 8.60E-04 |
| 48 | GO:1902448: positive regulation of shade avoidance | 8.60E-04 |
| 49 | GO:0009405: pathogenesis | 8.60E-04 |
| 50 | GO:0045604: regulation of epidermal cell differentiation | 8.60E-04 |
| 51 | GO:1901672: positive regulation of systemic acquired resistance | 8.60E-04 |
| 52 | GO:0006753: nucleoside phosphate metabolic process | 8.60E-04 |
| 53 | GO:0071230: cellular response to amino acid stimulus | 8.60E-04 |
| 54 | GO:0009150: purine ribonucleotide metabolic process | 8.60E-04 |
| 55 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.04E-03 |
| 56 | GO:0009647: skotomorphogenesis | 1.23E-03 |
| 57 | GO:0006164: purine nucleotide biosynthetic process | 1.23E-03 |
| 58 | GO:0048645: animal organ formation | 1.23E-03 |
| 59 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.23E-03 |
| 60 | GO:0048530: fruit morphogenesis | 1.23E-03 |
| 61 | GO:1901332: negative regulation of lateral root development | 1.23E-03 |
| 62 | GO:0009585: red, far-red light phototransduction | 1.55E-03 |
| 63 | GO:0048629: trichome patterning | 1.64E-03 |
| 64 | GO:0051322: anaphase | 1.64E-03 |
| 65 | GO:0046355: mannan catabolic process | 1.64E-03 |
| 66 | GO:0009649: entrainment of circadian clock | 1.64E-03 |
| 67 | GO:0032366: intracellular sterol transport | 1.64E-03 |
| 68 | GO:1902347: response to strigolactone | 1.64E-03 |
| 69 | GO:0009902: chloroplast relocation | 1.64E-03 |
| 70 | GO:0048367: shoot system development | 1.99E-03 |
| 71 | GO:0010182: sugar mediated signaling pathway | 2.03E-03 |
| 72 | GO:0010154: fruit development | 2.03E-03 |
| 73 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.09E-03 |
| 74 | GO:0006544: glycine metabolic process | 2.09E-03 |
| 75 | GO:0010117: photoprotection | 2.09E-03 |
| 76 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.09E-03 |
| 77 | GO:0048825: cotyledon development | 2.34E-03 |
| 78 | GO:0006561: proline biosynthetic process | 2.57E-03 |
| 79 | GO:0006563: L-serine metabolic process | 2.57E-03 |
| 80 | GO:0048827: phyllome development | 2.57E-03 |
| 81 | GO:0009959: negative gravitropism | 2.57E-03 |
| 82 | GO:0060918: auxin transport | 2.57E-03 |
| 83 | GO:1901371: regulation of leaf morphogenesis | 2.57E-03 |
| 84 | GO:0000741: karyogamy | 2.57E-03 |
| 85 | GO:0009117: nucleotide metabolic process | 2.57E-03 |
| 86 | GO:0009416: response to light stimulus | 2.65E-03 |
| 87 | GO:0010583: response to cyclopentenone | 2.67E-03 |
| 88 | GO:0048444: floral organ morphogenesis | 3.09E-03 |
| 89 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 3.09E-03 |
| 90 | GO:0010310: regulation of hydrogen peroxide metabolic process | 3.09E-03 |
| 91 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 3.09E-03 |
| 92 | GO:0042372: phylloquinone biosynthetic process | 3.09E-03 |
| 93 | GO:0048280: vesicle fusion with Golgi apparatus | 3.09E-03 |
| 94 | GO:0009903: chloroplast avoidance movement | 3.09E-03 |
| 95 | GO:0010189: vitamin E biosynthetic process | 3.09E-03 |
| 96 | GO:0010161: red light signaling pathway | 3.64E-03 |
| 97 | GO:0015937: coenzyme A biosynthetic process | 3.64E-03 |
| 98 | GO:0051510: regulation of unidimensional cell growth | 3.64E-03 |
| 99 | GO:0010029: regulation of seed germination | 3.81E-03 |
| 100 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 4.23E-03 |
| 101 | GO:0043068: positive regulation of programmed cell death | 4.23E-03 |
| 102 | GO:0009690: cytokinin metabolic process | 4.23E-03 |
| 103 | GO:0010078: maintenance of root meristem identity | 4.23E-03 |
| 104 | GO:0048573: photoperiodism, flowering | 4.25E-03 |
| 105 | GO:0043562: cellular response to nitrogen levels | 4.84E-03 |
| 106 | GO:0010093: specification of floral organ identity | 4.84E-03 |
| 107 | GO:0010099: regulation of photomorphogenesis | 4.84E-03 |
| 108 | GO:0010100: negative regulation of photomorphogenesis | 4.84E-03 |
| 109 | GO:0007623: circadian rhythm | 4.85E-03 |
| 110 | GO:0006783: heme biosynthetic process | 5.48E-03 |
| 111 | GO:0006189: 'de novo' IMP biosynthetic process | 5.48E-03 |
| 112 | GO:0009637: response to blue light | 5.96E-03 |
| 113 | GO:1900426: positive regulation of defense response to bacterium | 6.15E-03 |
| 114 | GO:0010018: far-red light signaling pathway | 6.15E-03 |
| 115 | GO:1900865: chloroplast RNA modification | 6.15E-03 |
| 116 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 6.15E-03 |
| 117 | GO:0009641: shade avoidance | 6.85E-03 |
| 118 | GO:0010192: mucilage biosynthetic process | 6.85E-03 |
| 119 | GO:0006896: Golgi to vacuole transport | 6.85E-03 |
| 120 | GO:0009299: mRNA transcription | 6.85E-03 |
| 121 | GO:0006535: cysteine biosynthetic process from serine | 6.85E-03 |
| 122 | GO:0009688: abscisic acid biosynthetic process | 6.85E-03 |
| 123 | GO:0009684: indoleacetic acid biosynthetic process | 7.58E-03 |
| 124 | GO:0006816: calcium ion transport | 7.58E-03 |
| 125 | GO:0009750: response to fructose | 7.58E-03 |
| 126 | GO:0009640: photomorphogenesis | 7.68E-03 |
| 127 | GO:0009644: response to high light intensity | 8.31E-03 |
| 128 | GO:0006790: sulfur compound metabolic process | 8.33E-03 |
| 129 | GO:0010229: inflorescence development | 9.11E-03 |
| 130 | GO:0030036: actin cytoskeleton organization | 9.11E-03 |
| 131 | GO:0010075: regulation of meristem growth | 9.11E-03 |
| 132 | GO:0009725: response to hormone | 9.11E-03 |
| 133 | GO:0010588: cotyledon vascular tissue pattern formation | 9.11E-03 |
| 134 | GO:0030048: actin filament-based movement | 9.11E-03 |
| 135 | GO:0009785: blue light signaling pathway | 9.11E-03 |
| 136 | GO:0010540: basipetal auxin transport | 9.92E-03 |
| 137 | GO:0006302: double-strand break repair | 9.92E-03 |
| 138 | GO:0048467: gynoecium development | 9.92E-03 |
| 139 | GO:0009933: meristem structural organization | 9.92E-03 |
| 140 | GO:0009825: multidimensional cell growth | 1.07E-02 |
| 141 | GO:0090351: seedling development | 1.07E-02 |
| 142 | GO:0010030: positive regulation of seed germination | 1.07E-02 |
| 143 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.16E-02 |
| 144 | GO:0042753: positive regulation of circadian rhythm | 1.16E-02 |
| 145 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.25E-02 |
| 146 | GO:0005992: trehalose biosynthetic process | 1.25E-02 |
| 147 | GO:0019344: cysteine biosynthetic process | 1.25E-02 |
| 148 | GO:0007010: cytoskeleton organization | 1.25E-02 |
| 149 | GO:0010187: negative regulation of seed germination | 1.25E-02 |
| 150 | GO:0006874: cellular calcium ion homeostasis | 1.34E-02 |
| 151 | GO:0009740: gibberellic acid mediated signaling pathway | 1.39E-02 |
| 152 | GO:0051321: meiotic cell cycle | 1.43E-02 |
| 153 | GO:0009814: defense response, incompatible interaction | 1.53E-02 |
| 154 | GO:0035428: hexose transmembrane transport | 1.53E-02 |
| 155 | GO:0009686: gibberellin biosynthetic process | 1.62E-02 |
| 156 | GO:0010091: trichome branching | 1.72E-02 |
| 157 | GO:0019722: calcium-mediated signaling | 1.72E-02 |
| 158 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.82E-02 |
| 159 | GO:0042147: retrograde transport, endosome to Golgi | 1.82E-02 |
| 160 | GO:0070417: cellular response to cold | 1.82E-02 |
| 161 | GO:0010087: phloem or xylem histogenesis | 1.93E-02 |
| 162 | GO:0010118: stomatal movement | 1.93E-02 |
| 163 | GO:0042631: cellular response to water deprivation | 1.93E-02 |
| 164 | GO:0000226: microtubule cytoskeleton organization | 1.93E-02 |
| 165 | GO:0042335: cuticle development | 1.93E-02 |
| 166 | GO:0000271: polysaccharide biosynthetic process | 1.93E-02 |
| 167 | GO:0080022: primary root development | 1.93E-02 |
| 168 | GO:0034220: ion transmembrane transport | 1.93E-02 |
| 169 | GO:0010197: polar nucleus fusion | 2.03E-02 |
| 170 | GO:0046323: glucose import | 2.03E-02 |
| 171 | GO:0009741: response to brassinosteroid | 2.03E-02 |
| 172 | GO:0045489: pectin biosynthetic process | 2.03E-02 |
| 173 | GO:0008360: regulation of cell shape | 2.03E-02 |
| 174 | GO:0009958: positive gravitropism | 2.03E-02 |
| 175 | GO:0007018: microtubule-based movement | 2.14E-02 |
| 176 | GO:0042752: regulation of circadian rhythm | 2.14E-02 |
| 177 | GO:0009646: response to absence of light | 2.14E-02 |
| 178 | GO:0008654: phospholipid biosynthetic process | 2.25E-02 |
| 179 | GO:0009851: auxin biosynthetic process | 2.25E-02 |
| 180 | GO:0006623: protein targeting to vacuole | 2.25E-02 |
| 181 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.36E-02 |
| 182 | GO:0071554: cell wall organization or biogenesis | 2.36E-02 |
| 183 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.36E-02 |
| 184 | GO:0040008: regulation of growth | 2.45E-02 |
| 185 | GO:0045490: pectin catabolic process | 2.56E-02 |
| 186 | GO:0006468: protein phosphorylation | 2.64E-02 |
| 187 | GO:0009639: response to red or far red light | 2.71E-02 |
| 188 | GO:0006464: cellular protein modification process | 2.71E-02 |
| 189 | GO:0007166: cell surface receptor signaling pathway | 2.93E-02 |
| 190 | GO:0000910: cytokinesis | 2.95E-02 |
| 191 | GO:0009911: positive regulation of flower development | 3.07E-02 |
| 192 | GO:0007165: signal transduction | 3.17E-02 |
| 193 | GO:0015995: chlorophyll biosynthetic process | 3.45E-02 |
| 194 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.45E-02 |
| 195 | GO:0018298: protein-chromophore linkage | 3.71E-02 |
| 196 | GO:0010218: response to far red light | 3.97E-02 |
| 197 | GO:0035556: intracellular signal transduction | 3.99E-02 |
| 198 | GO:0048527: lateral root development | 4.11E-02 |
| 199 | GO:0010119: regulation of stomatal movement | 4.11E-02 |
| 200 | GO:0009853: photorespiration | 4.39E-02 |
| 201 | GO:0016051: carbohydrate biosynthetic process | 4.39E-02 |
| 202 | GO:0006631: fatty acid metabolic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 2 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 3 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 4 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 6 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 7 | GO:0003999: adenine phosphoribosyltransferase activity | 2.19E-05 |
| 8 | GO:0042802: identical protein binding | 2.25E-04 |
| 9 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.39E-04 |
| 10 | GO:0010945: CoA pyrophosphatase activity | 2.39E-04 |
| 11 | GO:0008066: glutamate receptor activity | 2.39E-04 |
| 12 | GO:0010313: phytochrome binding | 2.39E-04 |
| 13 | GO:0050017: L-3-cyanoalanine synthase activity | 5.29E-04 |
| 14 | GO:0017118: lipoyltransferase activity | 5.29E-04 |
| 15 | GO:0043425: bHLH transcription factor binding | 5.29E-04 |
| 16 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.29E-04 |
| 17 | GO:0003938: IMP dehydrogenase activity | 5.29E-04 |
| 18 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.29E-04 |
| 19 | GO:0015929: hexosaminidase activity | 5.29E-04 |
| 20 | GO:0004563: beta-N-acetylhexosaminidase activity | 5.29E-04 |
| 21 | GO:0090729: toxin activity | 8.60E-04 |
| 22 | GO:0008017: microtubule binding | 9.46E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 1.23E-03 |
| 24 | GO:0047627: adenylylsulfatase activity | 1.23E-03 |
| 25 | GO:0035529: NADH pyrophosphatase activity | 1.23E-03 |
| 26 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.23E-03 |
| 27 | GO:0008408: 3'-5' exonuclease activity | 1.25E-03 |
| 28 | GO:0030570: pectate lyase activity | 1.48E-03 |
| 29 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 1.64E-03 |
| 30 | GO:0080032: methyl jasmonate esterase activity | 1.64E-03 |
| 31 | GO:0016846: carbon-sulfur lyase activity | 2.09E-03 |
| 32 | GO:0004372: glycine hydroxymethyltransferase activity | 2.09E-03 |
| 33 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.57E-03 |
| 34 | GO:0004709: MAP kinase kinase kinase activity | 2.57E-03 |
| 35 | GO:0000210: NAD+ diphosphatase activity | 2.57E-03 |
| 36 | GO:0016208: AMP binding | 2.57E-03 |
| 37 | GO:0016462: pyrophosphatase activity | 2.57E-03 |
| 38 | GO:0004124: cysteine synthase activity | 3.09E-03 |
| 39 | GO:0004871: signal transducer activity | 3.34E-03 |
| 40 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 3.64E-03 |
| 41 | GO:0030247: polysaccharide binding | 4.25E-03 |
| 42 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.44E-03 |
| 43 | GO:0071949: FAD binding | 5.48E-03 |
| 44 | GO:0046872: metal ion binding | 5.62E-03 |
| 45 | GO:0004672: protein kinase activity | 5.71E-03 |
| 46 | GO:0004805: trehalose-phosphatase activity | 6.85E-03 |
| 47 | GO:0047372: acylglycerol lipase activity | 7.58E-03 |
| 48 | GO:0008794: arsenate reductase (glutaredoxin) activity | 7.58E-03 |
| 49 | GO:0005262: calcium channel activity | 9.11E-03 |
| 50 | GO:0000175: 3'-5'-exoribonuclease activity | 9.11E-03 |
| 51 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.11E-03 |
| 52 | GO:0008131: primary amine oxidase activity | 9.92E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 9.92E-03 |
| 54 | GO:0005217: intracellular ligand-gated ion channel activity | 1.07E-02 |
| 55 | GO:0004970: ionotropic glutamate receptor activity | 1.07E-02 |
| 56 | GO:0003777: microtubule motor activity | 1.15E-02 |
| 57 | GO:0005528: FK506 binding | 1.25E-02 |
| 58 | GO:0004176: ATP-dependent peptidase activity | 1.43E-02 |
| 59 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.53E-02 |
| 60 | GO:0003727: single-stranded RNA binding | 1.72E-02 |
| 61 | GO:0016829: lyase activity | 2.01E-02 |
| 62 | GO:0001085: RNA polymerase II transcription factor binding | 2.03E-02 |
| 63 | GO:0005355: glucose transmembrane transporter activity | 2.14E-02 |
| 64 | GO:0019901: protein kinase binding | 2.25E-02 |
| 65 | GO:0008270: zinc ion binding | 2.66E-02 |
| 66 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.83E-02 |
| 67 | GO:0008237: metallopeptidase activity | 2.83E-02 |
| 68 | GO:0016413: O-acetyltransferase activity | 2.95E-02 |
| 69 | GO:0004721: phosphoprotein phosphatase activity | 3.45E-02 |
| 70 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.97E-02 |
| 71 | GO:0004222: metalloendopeptidase activity | 3.97E-02 |
| 72 | GO:0016788: hydrolase activity, acting on ester bonds | 4.03E-02 |
| 73 | GO:0030145: manganese ion binding | 4.11E-02 |
| 74 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.11E-02 |
| 75 | GO:0050897: cobalt ion binding | 4.11E-02 |
| 76 | GO:0000149: SNARE binding | 4.67E-02 |
| 77 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.67E-02 |