GO Enrichment Analysis of Co-expressed Genes with
AT3G13090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 3 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 4 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 5 | GO:0043132: NAD transport | 6.25E-07 |
| 6 | GO:0030163: protein catabolic process | 6.43E-05 |
| 7 | GO:0001558: regulation of cell growth | 8.31E-05 |
| 8 | GO:0032107: regulation of response to nutrient levels | 1.10E-04 |
| 9 | GO:0035266: meristem growth | 1.10E-04 |
| 10 | GO:0016337: single organismal cell-cell adhesion | 1.10E-04 |
| 11 | GO:0007292: female gamete generation | 1.10E-04 |
| 12 | GO:0009623: response to parasitic fungus | 1.10E-04 |
| 13 | GO:0035352: NAD transmembrane transport | 1.10E-04 |
| 14 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 1.10E-04 |
| 15 | GO:0018345: protein palmitoylation | 2.57E-04 |
| 16 | GO:0070734: histone H3-K27 methylation | 2.57E-04 |
| 17 | GO:0051252: regulation of RNA metabolic process | 2.57E-04 |
| 18 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 2.57E-04 |
| 19 | GO:0080183: response to photooxidative stress | 2.57E-04 |
| 20 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.57E-04 |
| 21 | GO:0006024: glycosaminoglycan biosynthetic process | 2.57E-04 |
| 22 | GO:0048569: post-embryonic animal organ development | 2.57E-04 |
| 23 | GO:0052541: plant-type cell wall cellulose metabolic process | 2.57E-04 |
| 24 | GO:0051788: response to misfolded protein | 2.57E-04 |
| 25 | GO:0044375: regulation of peroxisome size | 4.25E-04 |
| 26 | GO:0006275: regulation of DNA replication | 4.25E-04 |
| 27 | GO:0018342: protein prenylation | 4.25E-04 |
| 28 | GO:0060968: regulation of gene silencing | 4.25E-04 |
| 29 | GO:0006788: heme oxidation | 4.25E-04 |
| 30 | GO:0008333: endosome to lysosome transport | 4.25E-04 |
| 31 | GO:0055074: calcium ion homeostasis | 4.25E-04 |
| 32 | GO:0071367: cellular response to brassinosteroid stimulus | 4.25E-04 |
| 33 | GO:0009814: defense response, incompatible interaction | 4.85E-04 |
| 34 | GO:0071369: cellular response to ethylene stimulus | 5.28E-04 |
| 35 | GO:0010227: floral organ abscission | 5.28E-04 |
| 36 | GO:0000187: activation of MAPK activity | 6.10E-04 |
| 37 | GO:0072334: UDP-galactose transmembrane transport | 6.10E-04 |
| 38 | GO:0010104: regulation of ethylene-activated signaling pathway | 6.10E-04 |
| 39 | GO:0015858: nucleoside transport | 6.10E-04 |
| 40 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.67E-04 |
| 41 | GO:0033320: UDP-D-xylose biosynthetic process | 8.10E-04 |
| 42 | GO:1990937: xylan acetylation | 8.10E-04 |
| 43 | GO:0046283: anthocyanin-containing compound metabolic process | 1.02E-03 |
| 44 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.02E-03 |
| 45 | GO:0006665: sphingolipid metabolic process | 1.02E-03 |
| 46 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.25E-03 |
| 47 | GO:0048827: phyllome development | 1.25E-03 |
| 48 | GO:0048232: male gamete generation | 1.25E-03 |
| 49 | GO:0043248: proteasome assembly | 1.25E-03 |
| 50 | GO:0042732: D-xylose metabolic process | 1.25E-03 |
| 51 | GO:0042176: regulation of protein catabolic process | 1.25E-03 |
| 52 | GO:0060918: auxin transport | 1.25E-03 |
| 53 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 1.75E-03 |
| 54 | GO:0051510: regulation of unidimensional cell growth | 1.75E-03 |
| 55 | GO:0009610: response to symbiotic fungus | 1.75E-03 |
| 56 | GO:0080027: response to herbivore | 1.75E-03 |
| 57 | GO:0015937: coenzyme A biosynthetic process | 1.75E-03 |
| 58 | GO:0048527: lateral root development | 1.86E-03 |
| 59 | GO:0006468: protein phosphorylation | 2.02E-03 |
| 60 | GO:0010078: maintenance of root meristem identity | 2.03E-03 |
| 61 | GO:2000070: regulation of response to water deprivation | 2.03E-03 |
| 62 | GO:0006102: isocitrate metabolic process | 2.03E-03 |
| 63 | GO:0045087: innate immune response | 2.04E-03 |
| 64 | GO:0006099: tricarboxylic acid cycle | 2.13E-03 |
| 65 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.32E-03 |
| 66 | GO:0007186: G-protein coupled receptor signaling pathway | 2.32E-03 |
| 67 | GO:0006839: mitochondrial transport | 2.32E-03 |
| 68 | GO:0015780: nucleotide-sugar transport | 2.62E-03 |
| 69 | GO:0046686: response to cadmium ion | 2.90E-03 |
| 70 | GO:0008202: steroid metabolic process | 2.93E-03 |
| 71 | GO:0048829: root cap development | 3.25E-03 |
| 72 | GO:0010015: root morphogenesis | 3.59E-03 |
| 73 | GO:0055046: microgametogenesis | 4.30E-03 |
| 74 | GO:0010102: lateral root morphogenesis | 4.30E-03 |
| 75 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 4.30E-03 |
| 76 | GO:0007034: vacuolar transport | 4.66E-03 |
| 77 | GO:0010540: basipetal auxin transport | 4.66E-03 |
| 78 | GO:0006541: glutamine metabolic process | 4.66E-03 |
| 79 | GO:0009933: meristem structural organization | 4.66E-03 |
| 80 | GO:0090351: seedling development | 5.04E-03 |
| 81 | GO:0070588: calcium ion transmembrane transport | 5.04E-03 |
| 82 | GO:0009225: nucleotide-sugar metabolic process | 5.04E-03 |
| 83 | GO:0007031: peroxisome organization | 5.04E-03 |
| 84 | GO:0042742: defense response to bacterium | 5.69E-03 |
| 85 | GO:0000027: ribosomal large subunit assembly | 5.84E-03 |
| 86 | GO:0010187: negative regulation of seed germination | 5.84E-03 |
| 87 | GO:0051302: regulation of cell division | 6.25E-03 |
| 88 | GO:0043622: cortical microtubule organization | 6.25E-03 |
| 89 | GO:0016998: cell wall macromolecule catabolic process | 6.67E-03 |
| 90 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.11E-03 |
| 91 | GO:0071456: cellular response to hypoxia | 7.11E-03 |
| 92 | GO:0009294: DNA mediated transformation | 7.55E-03 |
| 93 | GO:0071215: cellular response to abscisic acid stimulus | 7.55E-03 |
| 94 | GO:0042147: retrograde transport, endosome to Golgi | 8.46E-03 |
| 95 | GO:0010051: xylem and phloem pattern formation | 8.93E-03 |
| 96 | GO:0010087: phloem or xylem histogenesis | 8.93E-03 |
| 97 | GO:0008360: regulation of cell shape | 9.41E-03 |
| 98 | GO:0009555: pollen development | 9.47E-03 |
| 99 | GO:0007166: cell surface receptor signaling pathway | 9.83E-03 |
| 100 | GO:0048544: recognition of pollen | 9.91E-03 |
| 101 | GO:0006623: protein targeting to vacuole | 1.04E-02 |
| 102 | GO:0032502: developmental process | 1.14E-02 |
| 103 | GO:0009615: response to virus | 1.42E-02 |
| 104 | GO:0009627: systemic acquired resistance | 1.53E-02 |
| 105 | GO:0008219: cell death | 1.71E-02 |
| 106 | GO:0009817: defense response to fungus, incompatible interaction | 1.71E-02 |
| 107 | GO:0010311: lateral root formation | 1.77E-02 |
| 108 | GO:0046777: protein autophosphorylation | 1.77E-02 |
| 109 | GO:0009834: plant-type secondary cell wall biogenesis | 1.83E-02 |
| 110 | GO:0006499: N-terminal protein myristoylation | 1.83E-02 |
| 111 | GO:0009407: toxin catabolic process | 1.83E-02 |
| 112 | GO:0010043: response to zinc ion | 1.89E-02 |
| 113 | GO:0009631: cold acclimation | 1.89E-02 |
| 114 | GO:0045454: cell redox homeostasis | 1.98E-02 |
| 115 | GO:0009867: jasmonic acid mediated signaling pathway | 2.02E-02 |
| 116 | GO:0006897: endocytosis | 2.29E-02 |
| 117 | GO:0009408: response to heat | 2.45E-02 |
| 118 | GO:0000209: protein polyubiquitination | 2.49E-02 |
| 119 | GO:0008643: carbohydrate transport | 2.56E-02 |
| 120 | GO:0009965: leaf morphogenesis | 2.63E-02 |
| 121 | GO:0000165: MAPK cascade | 2.77E-02 |
| 122 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.77E-02 |
| 123 | GO:0009846: pollen germination | 2.85E-02 |
| 124 | GO:0042538: hyperosmotic salinity response | 2.85E-02 |
| 125 | GO:0006486: protein glycosylation | 2.99E-02 |
| 126 | GO:0006508: proteolysis | 3.06E-02 |
| 127 | GO:0010224: response to UV-B | 3.07E-02 |
| 128 | GO:0009734: auxin-activated signaling pathway | 3.44E-02 |
| 129 | GO:0048367: shoot system development | 3.45E-02 |
| 130 | GO:0009626: plant-type hypersensitive response | 3.53E-02 |
| 131 | GO:0016569: covalent chromatin modification | 3.69E-02 |
| 132 | GO:0018105: peptidyl-serine phosphorylation | 3.93E-02 |
| 133 | GO:0006396: RNA processing | 3.93E-02 |
| 134 | GO:0051726: regulation of cell cycle | 4.01E-02 |
| 135 | GO:0009738: abscisic acid-activated signaling pathway | 4.19E-02 |
| 136 | GO:0009058: biosynthetic process | 4.69E-02 |
| 137 | GO:0009845: seed germination | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0018580: nitronate monooxygenase activity | 0.00E+00 |
| 3 | GO:0051724: NAD transporter activity | 6.25E-07 |
| 4 | GO:0048037: cofactor binding | 1.10E-04 |
| 5 | GO:0004633: phosphopantothenoylcysteine decarboxylase activity | 1.10E-04 |
| 6 | GO:0015230: FAD transmembrane transporter activity | 1.10E-04 |
| 7 | GO:2001147: camalexin binding | 1.10E-04 |
| 8 | GO:2001227: quercitrin binding | 1.10E-04 |
| 9 | GO:0046976: histone methyltransferase activity (H3-K27 specific) | 1.10E-04 |
| 10 | GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity | 2.57E-04 |
| 11 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.57E-04 |
| 12 | GO:0015228: coenzyme A transmembrane transporter activity | 2.57E-04 |
| 13 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.57E-04 |
| 14 | GO:0008428: ribonuclease inhibitor activity | 2.57E-04 |
| 15 | GO:0004190: aspartic-type endopeptidase activity | 2.94E-04 |
| 16 | GO:0004867: serine-type endopeptidase inhibitor activity | 2.94E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.10E-04 |
| 18 | GO:0016301: kinase activity | 6.88E-04 |
| 19 | GO:0004392: heme oxygenase (decyclizing) activity | 8.10E-04 |
| 20 | GO:0004301: epoxide hydrolase activity | 8.10E-04 |
| 21 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.02E-03 |
| 22 | GO:0008948: oxaloacetate decarboxylase activity | 1.02E-03 |
| 23 | GO:0080122: AMP transmembrane transporter activity | 1.02E-03 |
| 24 | GO:0015297: antiporter activity | 1.16E-03 |
| 25 | GO:0036402: proteasome-activating ATPase activity | 1.25E-03 |
| 26 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.25E-03 |
| 27 | GO:1990538: xylan O-acetyltransferase activity | 1.25E-03 |
| 28 | GO:0031593: polyubiquitin binding | 1.25E-03 |
| 29 | GO:0005347: ATP transmembrane transporter activity | 1.49E-03 |
| 30 | GO:0051020: GTPase binding | 1.49E-03 |
| 31 | GO:0015217: ADP transmembrane transporter activity | 1.49E-03 |
| 32 | GO:0070403: NAD+ binding | 1.49E-03 |
| 33 | GO:0015631: tubulin binding | 1.49E-03 |
| 34 | GO:0005096: GTPase activator activity | 1.69E-03 |
| 35 | GO:0043295: glutathione binding | 1.75E-03 |
| 36 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.75E-03 |
| 37 | GO:0004525: ribonuclease III activity | 2.03E-03 |
| 38 | GO:0004708: MAP kinase kinase activity | 2.03E-03 |
| 39 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 2.03E-03 |
| 40 | GO:0008142: oxysterol binding | 2.32E-03 |
| 41 | GO:0030234: enzyme regulator activity | 3.25E-03 |
| 42 | GO:0008327: methyl-CpG binding | 3.59E-03 |
| 43 | GO:0005524: ATP binding | 3.77E-03 |
| 44 | GO:0015095: magnesium ion transmembrane transporter activity | 4.30E-03 |
| 45 | GO:0005388: calcium-transporting ATPase activity | 4.30E-03 |
| 46 | GO:0004565: beta-galactosidase activity | 4.30E-03 |
| 47 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.30E-03 |
| 48 | GO:0031624: ubiquitin conjugating enzyme binding | 4.66E-03 |
| 49 | GO:0022857: transmembrane transporter activity | 4.69E-03 |
| 50 | GO:0017025: TBP-class protein binding | 5.04E-03 |
| 51 | GO:0008061: chitin binding | 5.04E-03 |
| 52 | GO:0043130: ubiquitin binding | 5.84E-03 |
| 53 | GO:0001046: core promoter sequence-specific DNA binding | 5.84E-03 |
| 54 | GO:0035251: UDP-glucosyltransferase activity | 6.67E-03 |
| 55 | GO:0004540: ribonuclease activity | 6.67E-03 |
| 56 | GO:0004674: protein serine/threonine kinase activity | 7.06E-03 |
| 57 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.01E-03 |
| 58 | GO:0001085: RNA polymerase II transcription factor binding | 9.41E-03 |
| 59 | GO:0010181: FMN binding | 9.91E-03 |
| 60 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.30E-02 |
| 61 | GO:0000287: magnesium ion binding | 1.31E-02 |
| 62 | GO:0051213: dioxygenase activity | 1.42E-02 |
| 63 | GO:0005516: calmodulin binding | 1.59E-02 |
| 64 | GO:0030247: polysaccharide binding | 1.59E-02 |
| 65 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.89E-02 |
| 66 | GO:0005509: calcium ion binding | 2.09E-02 |
| 67 | GO:0042393: histone binding | 2.22E-02 |
| 68 | GO:0004364: glutathione transferase activity | 2.35E-02 |
| 69 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.56E-02 |
| 70 | GO:0005198: structural molecule activity | 2.63E-02 |
| 71 | GO:0009055: electron carrier activity | 2.63E-02 |
| 72 | GO:0051287: NAD binding | 2.77E-02 |
| 73 | GO:0046872: metal ion binding | 3.28E-02 |
| 74 | GO:0016874: ligase activity | 3.69E-02 |
| 75 | GO:0016887: ATPase activity | 3.78E-02 |
| 76 | GO:0051082: unfolded protein binding | 3.85E-02 |
| 77 | GO:0015035: protein disulfide oxidoreductase activity | 3.93E-02 |
| 78 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.60E-02 |
| 79 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.95E-02 |