GO Enrichment Analysis of Co-expressed Genes with
AT3G12740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002764: immune response-regulating signaling pathway | 0.00E+00 |
| 2 | GO:0010324: membrane invagination | 0.00E+00 |
| 3 | GO:0010200: response to chitin | 2.66E-05 |
| 4 | GO:0006979: response to oxidative stress | 5.20E-05 |
| 5 | GO:0009751: response to salicylic acid | 6.44E-05 |
| 6 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.32E-04 |
| 7 | GO:0009609: response to symbiotic bacterium | 1.73E-04 |
| 8 | GO:0006643: membrane lipid metabolic process | 1.73E-04 |
| 9 | GO:0019478: D-amino acid catabolic process | 1.73E-04 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.73E-04 |
| 11 | GO:0048508: embryonic meristem development | 1.73E-04 |
| 12 | GO:0042742: defense response to bacterium | 2.66E-04 |
| 13 | GO:0006032: chitin catabolic process | 2.85E-04 |
| 14 | GO:0006452: translational frameshifting | 3.92E-04 |
| 15 | GO:0031349: positive regulation of defense response | 3.92E-04 |
| 16 | GO:0009945: radial axis specification | 3.92E-04 |
| 17 | GO:0000719: photoreactive repair | 3.92E-04 |
| 18 | GO:0015865: purine nucleotide transport | 3.92E-04 |
| 19 | GO:0045905: positive regulation of translational termination | 3.92E-04 |
| 20 | GO:0019441: tryptophan catabolic process to kynurenine | 3.92E-04 |
| 21 | GO:0006597: spermine biosynthetic process | 3.92E-04 |
| 22 | GO:0045901: positive regulation of translational elongation | 3.92E-04 |
| 23 | GO:0010155: regulation of proton transport | 3.92E-04 |
| 24 | GO:0009838: abscission | 3.92E-04 |
| 25 | GO:0006470: protein dephosphorylation | 5.41E-04 |
| 26 | GO:0009617: response to bacterium | 5.78E-04 |
| 27 | GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | 6.40E-04 |
| 28 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 6.40E-04 |
| 29 | GO:0016045: detection of bacterium | 6.40E-04 |
| 30 | GO:0010359: regulation of anion channel activity | 6.40E-04 |
| 31 | GO:0010476: gibberellin mediated signaling pathway | 6.40E-04 |
| 32 | GO:0010325: raffinose family oligosaccharide biosynthetic process | 6.40E-04 |
| 33 | GO:0009636: response to toxic substance | 7.01E-04 |
| 34 | GO:0016998: cell wall macromolecule catabolic process | 8.10E-04 |
| 35 | GO:0043207: response to external biotic stimulus | 9.13E-04 |
| 36 | GO:0046902: regulation of mitochondrial membrane permeability | 9.13E-04 |
| 37 | GO:0034219: carbohydrate transmembrane transport | 9.13E-04 |
| 38 | GO:0009414: response to water deprivation | 1.03E-03 |
| 39 | GO:0006621: protein retention in ER lumen | 1.21E-03 |
| 40 | GO:0010508: positive regulation of autophagy | 1.21E-03 |
| 41 | GO:0010188: response to microbial phytotoxin | 1.21E-03 |
| 42 | GO:0009620: response to fungus | 1.21E-03 |
| 43 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 1.21E-03 |
| 44 | GO:0007275: multicellular organism development | 1.22E-03 |
| 45 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.54E-03 |
| 46 | GO:0006596: polyamine biosynthetic process | 1.89E-03 |
| 47 | GO:0009759: indole glucosinolate biosynthetic process | 1.89E-03 |
| 48 | GO:0009942: longitudinal axis specification | 2.27E-03 |
| 49 | GO:0048444: floral organ morphogenesis | 2.27E-03 |
| 50 | GO:0001666: response to hypoxia | 2.30E-03 |
| 51 | GO:0009753: response to jasmonic acid | 2.37E-03 |
| 52 | GO:0009816: defense response to bacterium, incompatible interaction | 2.43E-03 |
| 53 | GO:0043090: amino acid import | 2.67E-03 |
| 54 | GO:1900056: negative regulation of leaf senescence | 2.67E-03 |
| 55 | GO:0050829: defense response to Gram-negative bacterium | 2.67E-03 |
| 56 | GO:1900057: positive regulation of leaf senescence | 2.67E-03 |
| 57 | GO:0010044: response to aluminum ion | 2.67E-03 |
| 58 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 2.67E-03 |
| 59 | GO:0006401: RNA catabolic process | 2.67E-03 |
| 60 | GO:0009610: response to symbiotic fungus | 2.67E-03 |
| 61 | GO:0046470: phosphatidylcholine metabolic process | 2.67E-03 |
| 62 | GO:0010150: leaf senescence | 2.71E-03 |
| 63 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.09E-03 |
| 64 | GO:0006605: protein targeting | 3.09E-03 |
| 65 | GO:0009407: toxin catabolic process | 3.29E-03 |
| 66 | GO:0010120: camalexin biosynthetic process | 3.54E-03 |
| 67 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.54E-03 |
| 68 | GO:0010099: regulation of photomorphogenesis | 3.54E-03 |
| 69 | GO:0009651: response to salt stress | 3.91E-03 |
| 70 | GO:0009821: alkaloid biosynthetic process | 4.00E-03 |
| 71 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.00E-03 |
| 72 | GO:0009056: catabolic process | 4.00E-03 |
| 73 | GO:0009835: fruit ripening | 4.00E-03 |
| 74 | GO:0090332: stomatal closure | 4.49E-03 |
| 75 | GO:0030042: actin filament depolymerization | 4.49E-03 |
| 76 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 4.49E-03 |
| 77 | GO:0009737: response to abscisic acid | 4.78E-03 |
| 78 | GO:0043069: negative regulation of programmed cell death | 4.99E-03 |
| 79 | GO:0009611: response to wounding | 5.26E-03 |
| 80 | GO:0009723: response to ethylene | 5.68E-03 |
| 81 | GO:0008361: regulation of cell size | 6.06E-03 |
| 82 | GO:0045893: positive regulation of transcription, DNA-templated | 6.28E-03 |
| 83 | GO:0010102: lateral root morphogenesis | 6.61E-03 |
| 84 | GO:0055046: microgametogenesis | 6.61E-03 |
| 85 | GO:0046688: response to copper ion | 7.79E-03 |
| 86 | GO:0009626: plant-type hypersensitive response | 8.25E-03 |
| 87 | GO:0000162: tryptophan biosynthetic process | 8.41E-03 |
| 88 | GO:0080147: root hair cell development | 9.03E-03 |
| 89 | GO:0050832: defense response to fungus | 9.14E-03 |
| 90 | GO:0006825: copper ion transport | 9.69E-03 |
| 91 | GO:0051302: regulation of cell division | 9.69E-03 |
| 92 | GO:0015992: proton transport | 1.03E-02 |
| 93 | GO:0030245: cellulose catabolic process | 1.10E-02 |
| 94 | GO:0035428: hexose transmembrane transport | 1.10E-02 |
| 95 | GO:0071456: cellular response to hypoxia | 1.10E-02 |
| 96 | GO:0009693: ethylene biosynthetic process | 1.17E-02 |
| 97 | GO:0009411: response to UV | 1.17E-02 |
| 98 | GO:0001944: vasculature development | 1.17E-02 |
| 99 | GO:0006012: galactose metabolic process | 1.17E-02 |
| 100 | GO:0009058: biosynthetic process | 1.23E-02 |
| 101 | GO:0019722: calcium-mediated signaling | 1.24E-02 |
| 102 | GO:0010089: xylem development | 1.24E-02 |
| 103 | GO:0000413: protein peptidyl-prolyl isomerization | 1.39E-02 |
| 104 | GO:0010118: stomatal movement | 1.39E-02 |
| 105 | GO:0006662: glycerol ether metabolic process | 1.47E-02 |
| 106 | GO:0046323: glucose import | 1.47E-02 |
| 107 | GO:0071554: cell wall organization or biogenesis | 1.70E-02 |
| 108 | GO:0016032: viral process | 1.78E-02 |
| 109 | GO:0019760: glucosinolate metabolic process | 1.95E-02 |
| 110 | GO:0009738: abscisic acid-activated signaling pathway | 2.02E-02 |
| 111 | GO:0051607: defense response to virus | 2.12E-02 |
| 112 | GO:0009615: response to virus | 2.21E-02 |
| 113 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.30E-02 |
| 114 | GO:0006468: protein phosphorylation | 2.31E-02 |
| 115 | GO:0046686: response to cadmium ion | 2.86E-02 |
| 116 | GO:0010043: response to zinc ion | 2.96E-02 |
| 117 | GO:0007568: aging | 2.96E-02 |
| 118 | GO:0006952: defense response | 3.00E-02 |
| 119 | GO:0006865: amino acid transport | 3.06E-02 |
| 120 | GO:0034599: cellular response to oxidative stress | 3.27E-02 |
| 121 | GO:0006897: endocytosis | 3.58E-02 |
| 122 | GO:0045454: cell redox homeostasis | 3.72E-02 |
| 123 | GO:0045892: negative regulation of transcription, DNA-templated | 3.78E-02 |
| 124 | GO:0010114: response to red light | 3.79E-02 |
| 125 | GO:0009744: response to sucrose | 3.79E-02 |
| 126 | GO:0051707: response to other organism | 3.79E-02 |
| 127 | GO:0042546: cell wall biogenesis | 3.90E-02 |
| 128 | GO:0009965: leaf morphogenesis | 4.12E-02 |
| 129 | GO:0031347: regulation of defense response | 4.34E-02 |
| 130 | GO:0009809: lignin biosynthetic process | 4.68E-02 |
| 131 | GO:0009736: cytokinin-activated signaling pathway | 4.68E-02 |
| 132 | GO:0010224: response to UV-B | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010290: chlorophyll catabolite transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004610: phosphoacetylglucosamine mutase activity | 0.00E+00 |
| 3 | GO:0015431: glutathione S-conjugate-exporting ATPase activity | 0.00E+00 |
| 4 | GO:0051499: D-aminoacyl-tRNA deacylase activity | 0.00E+00 |
| 5 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.74E-05 |
| 6 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.73E-04 |
| 7 | GO:0016768: spermine synthase activity | 1.73E-04 |
| 8 | GO:2001147: camalexin binding | 1.73E-04 |
| 9 | GO:2001227: quercitrin binding | 1.73E-04 |
| 10 | GO:0004568: chitinase activity | 2.85E-04 |
| 11 | GO:0004061: arylformamidase activity | 3.92E-04 |
| 12 | GO:0015036: disulfide oxidoreductase activity | 3.92E-04 |
| 13 | GO:0010331: gibberellin binding | 3.92E-04 |
| 14 | GO:0004766: spermidine synthase activity | 3.92E-04 |
| 15 | GO:0016531: copper chaperone activity | 6.40E-04 |
| 16 | GO:0032403: protein complex binding | 6.40E-04 |
| 17 | GO:0031418: L-ascorbic acid binding | 6.71E-04 |
| 18 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 9.13E-04 |
| 19 | GO:0046923: ER retention sequence binding | 1.21E-03 |
| 20 | GO:0019199: transmembrane receptor protein kinase activity | 1.21E-03 |
| 21 | GO:0004737: pyruvate decarboxylase activity | 1.21E-03 |
| 22 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 1.54E-03 |
| 23 | GO:0005471: ATP:ADP antiporter activity | 1.54E-03 |
| 24 | GO:0004722: protein serine/threonine phosphatase activity | 1.78E-03 |
| 25 | GO:0030976: thiamine pyrophosphate binding | 1.89E-03 |
| 26 | GO:0003978: UDP-glucose 4-epimerase activity | 2.27E-03 |
| 27 | GO:0016831: carboxy-lyase activity | 2.67E-03 |
| 28 | GO:0043295: glutathione binding | 2.67E-03 |
| 29 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 3.09E-03 |
| 30 | GO:0043022: ribosome binding | 3.09E-03 |
| 31 | GO:0005509: calcium ion binding | 3.53E-03 |
| 32 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 3.54E-03 |
| 33 | GO:0004630: phospholipase D activity | 3.54E-03 |
| 34 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.78E-03 |
| 35 | GO:0071949: FAD binding | 4.00E-03 |
| 36 | GO:0016844: strictosidine synthase activity | 4.49E-03 |
| 37 | GO:0005515: protein binding | 4.57E-03 |
| 38 | GO:0004364: glutathione transferase activity | 4.67E-03 |
| 39 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.52E-03 |
| 40 | GO:0008559: xenobiotic-transporting ATPase activity | 5.52E-03 |
| 41 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.61E-03 |
| 42 | GO:0051119: sugar transmembrane transporter activity | 7.79E-03 |
| 43 | GO:0001046: core promoter sequence-specific DNA binding | 9.03E-03 |
| 44 | GO:0051536: iron-sulfur cluster binding | 9.03E-03 |
| 45 | GO:0005516: calmodulin binding | 9.46E-03 |
| 46 | GO:0015035: protein disulfide oxidoreductase activity | 9.61E-03 |
| 47 | GO:0043424: protein histidine kinase binding | 9.69E-03 |
| 48 | GO:0016301: kinase activity | 1.07E-02 |
| 49 | GO:0008810: cellulase activity | 1.17E-02 |
| 50 | GO:0047134: protein-disulfide reductase activity | 1.32E-02 |
| 51 | GO:0005355: glucose transmembrane transporter activity | 1.54E-02 |
| 52 | GO:0050662: coenzyme binding | 1.54E-02 |
| 53 | GO:0004791: thioredoxin-disulfide reductase activity | 1.54E-02 |
| 54 | GO:0019901: protein kinase binding | 1.62E-02 |
| 55 | GO:0004872: receptor activity | 1.62E-02 |
| 56 | GO:0004518: nuclease activity | 1.78E-02 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.87E-02 |
| 58 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.04E-02 |
| 59 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.06E-02 |
| 60 | GO:0016413: O-acetyltransferase activity | 2.12E-02 |
| 61 | GO:0008375: acetylglucosaminyltransferase activity | 2.39E-02 |
| 62 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.39E-02 |
| 63 | GO:0004683: calmodulin-dependent protein kinase activity | 2.48E-02 |
| 64 | GO:0004672: protein kinase activity | 2.62E-02 |
| 65 | GO:0050897: cobalt ion binding | 2.96E-02 |
| 66 | GO:0003746: translation elongation factor activity | 3.16E-02 |
| 67 | GO:0005507: copper ion binding | 3.27E-02 |
| 68 | GO:0003993: acid phosphatase activity | 3.27E-02 |
| 69 | GO:0004871: signal transducer activity | 3.89E-02 |
| 70 | GO:0005198: structural molecule activity | 4.12E-02 |
| 71 | GO:0015293: symporter activity | 4.12E-02 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.23E-02 |
| 73 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.68E-02 |