Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G12390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904277: negative regulation of wax biosynthetic process0.00E+00
2GO:0000066: mitochondrial ornithine transport4.31E-05
3GO:0006760: folic acid-containing compound metabolic process1.84E-04
4GO:0034090: maintenance of meiotic sister chromatid cohesion1.84E-04
5GO:0009650: UV protection2.70E-04
6GO:0019760: glucosinolate metabolic process3.21E-04
7GO:0046656: folic acid biosynthetic process3.64E-04
8GO:0071493: cellular response to UV-B4.63E-04
9GO:0046654: tetrahydrofolate biosynthetic process6.76E-04
10GO:0009610: response to symbiotic fungus7.90E-04
11GO:0046620: regulation of organ growth9.08E-04
12GO:0009733: response to auxin1.02E-03
13GO:0009821: alkaloid biosynthetic process1.16E-03
14GO:0010192: mucilage biosynthetic process1.43E-03
15GO:0009734: auxin-activated signaling pathway1.47E-03
16GO:0009767: photosynthetic electron transport chain1.87E-03
17GO:0090351: seedling development2.19E-03
18GO:0010583: response to cyclopentenone4.86E-03
19GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.97E-03
20GO:0071281: cellular response to iron ion5.07E-03
21GO:0010027: thylakoid membrane organization5.98E-03
22GO:0000160: phosphorelay signal transduction system7.43E-03
23GO:0006811: ion transport7.69E-03
24GO:0009873: ethylene-activated signaling pathway9.14E-03
25GO:0006839: mitochondrial transport9.28E-03
26GO:0009926: auxin polar transport1.01E-02
27GO:0009736: cytokinin-activated signaling pathway1.25E-02
28GO:0009058: biosynthetic process1.95E-02
29GO:0006413: translational initiation2.25E-02
30GO:0007623: circadian rhythm2.36E-02
31GO:0006355: regulation of transcription, DNA-templated2.63E-02
32GO:0010468: regulation of gene expression2.68E-02
33GO:0042254: ribosome biogenesis3.27E-02
34GO:0009723: response to ethylene3.58E-02
35GO:0006412: translation3.84E-02
36GO:0032259: methylation4.81E-02
37GO:0016042: lipid catabolic process4.85E-02
38GO:0009751: response to salicylic acid4.90E-02
39GO:0006629: lipid metabolic process4.95E-02
RankGO TermAdjusted P value
1GO:0005290: L-histidine transmembrane transporter activity4.31E-05
2GO:0102083: 7,8-dihydromonapterin aldolase activity1.07E-04
3GO:0000064: L-ornithine transmembrane transporter activity1.07E-04
4GO:0004150: dihydroneopterin aldolase activity1.07E-04
5GO:0015189: L-lysine transmembrane transporter activity2.70E-04
6GO:0015181: arginine transmembrane transporter activity2.70E-04
7GO:0004523: RNA-DNA hybrid ribonuclease activity4.63E-04
8GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.76E-04
9GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.03E-03
10GO:0016844: strictosidine synthase activity1.29E-03
11GO:0005089: Rho guanyl-nucleotide exchange factor activity1.57E-03
12GO:0000976: transcription regulatory region sequence-specific DNA binding1.72E-03
13GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.03E-03
14GO:0044212: transcription regulatory region DNA binding4.79E-03
15GO:0004518: nuclease activity4.86E-03
16GO:0000156: phosphorelay response regulator activity5.07E-03
17GO:0004806: triglyceride lipase activity6.69E-03
18GO:0004672: protein kinase activity7.80E-03
19GO:0004712: protein serine/threonine/tyrosine kinase activity9.01E-03
20GO:0043565: sequence-specific DNA binding1.01E-02
21GO:0051537: 2 iron, 2 sulfur cluster binding1.07E-02
22GO:0003735: structural constituent of ribosome1.15E-02
23GO:0016874: ligase activity1.54E-02
24GO:0005516: calmodulin binding1.90E-02
25GO:0015144: carbohydrate transmembrane transporter activity2.13E-02
26GO:0005351: sugar:proton symporter activity2.32E-02
27GO:0003700: transcription factor activity, sequence-specific DNA binding2.50E-02
28GO:0003743: translation initiation factor activity2.64E-02
29GO:0008168: methyltransferase activity3.14E-02
30GO:0016788: hydrolase activity, acting on ester bonds3.27E-02
31GO:0016491: oxidoreductase activity3.36E-02
32GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.27E-02
33GO:0004871: signal transducer activity4.41E-02
34GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.61E-02
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Gene type



Gene DE type