Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G12210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031054: pre-miRNA processing0.00E+00
2GO:0042820: vitamin B6 catabolic process0.00E+00
3GO:0009249: protein lipoylation0.00E+00
4GO:0042821: pyridoxal biosynthetic process0.00E+00
5GO:0009106: lipoate metabolic process0.00E+00
6GO:0000476: maturation of 4.5S rRNA7.23E-05
7GO:0009443: pyridoxal 5'-phosphate salvage7.23E-05
8GO:0000967: rRNA 5'-end processing7.23E-05
9GO:0006415: translational termination9.43E-05
10GO:0010207: photosystem II assembly1.45E-04
11GO:1900871: chloroplast mRNA modification1.74E-04
12GO:0030187: melatonin biosynthetic process1.74E-04
13GO:0034470: ncRNA processing1.74E-04
14GO:0010589: leaf proximal/distal pattern formation2.93E-04
15GO:0051604: protein maturation2.93E-04
16GO:0015940: pantothenate biosynthetic process2.93E-04
17GO:0045493: xylan catabolic process2.93E-04
18GO:0009405: pathogenesis2.93E-04
19GO:0046739: transport of virus in multicellular host4.23E-04
20GO:0009765: photosynthesis, light harvesting5.65E-04
21GO:0035279: mRNA cleavage involved in gene silencing by miRNA5.65E-04
22GO:0009107: lipoate biosynthetic process7.14E-04
23GO:0016123: xanthophyll biosynthetic process7.14E-04
24GO:0016120: carotene biosynthetic process7.14E-04
25GO:0010027: thylakoid membrane organization7.34E-04
26GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway8.73E-04
27GO:0032973: amino acid export8.73E-04
28GO:0007568: aging1.08E-03
29GO:0035196: production of miRNAs involved in gene silencing by miRNA1.21E-03
30GO:0043090: amino acid import1.21E-03
31GO:0032544: plastid translation1.59E-03
32GO:0009657: plastid organization1.59E-03
33GO:0009821: alkaloid biosynthetic process1.80E-03
34GO:0080144: amino acid homeostasis1.80E-03
35GO:0010267: production of ta-siRNAs involved in RNA interference2.01E-03
36GO:0009684: indoleacetic acid biosynthetic process2.46E-03
37GO:0019853: L-ascorbic acid biosynthetic process3.44E-03
38GO:0061077: chaperone-mediated protein folding4.54E-03
39GO:0006413: translational initiation4.58E-03
40GO:0006012: galactose metabolic process5.13E-03
41GO:0016117: carotenoid biosynthetic process5.74E-03
42GO:0010305: leaf vascular tissue pattern formation6.38E-03
43GO:0009658: chloroplast organization7.59E-03
44GO:0016032: viral process7.72E-03
45GO:0016126: sterol biosynthetic process9.54E-03
46GO:0009911: positive regulation of flower development9.54E-03
47GO:0009627: systemic acquired resistance1.03E-02
48GO:0010411: xyloglucan metabolic process1.07E-02
49GO:0032259: methylation1.33E-02
50GO:0016042: lipid catabolic process1.35E-02
51GO:0045087: innate immune response1.36E-02
52GO:0006397: mRNA processing1.45E-02
53GO:0009965: leaf morphogenesis1.77E-02
54GO:0009585: red, far-red light phototransduction2.01E-02
55GO:0009620: response to fungus2.42E-02
56GO:0006396: RNA processing2.64E-02
57GO:0009058: biosynthetic process3.15E-02
58GO:0055114: oxidation-reduction process3.19E-02
59GO:0040008: regulation of growth3.69E-02
60GO:0009451: RNA modification3.87E-02
61GO:0008380: RNA splicing4.32E-02
62GO:0071555: cell wall organization4.98E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0043864: indoleacetamide hydrolase activity0.00E+00
3GO:0050613: delta14-sterol reductase activity0.00E+00
4GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
5GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
6GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
7GO:0010349: L-galactose dehydrogenase activity0.00E+00
8GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
9GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
10GO:0045435: lycopene epsilon cyclase activity0.00E+00
11GO:0016149: translation release factor activity, codon specific2.69E-06
12GO:0004033: aldo-keto reductase (NADP) activity3.42E-05
13GO:0003747: translation release factor activity5.45E-05
14GO:0004856: xylulokinase activity7.23E-05
15GO:0016784: 3-mercaptopyruvate sulfurtransferase activity7.23E-05
16GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity7.23E-05
17GO:0017118: lipoyltransferase activity1.74E-04
18GO:0016415: octanoyltransferase activity1.74E-04
19GO:0005528: FK506 binding2.07E-04
20GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.93E-04
21GO:0070402: NADPH binding2.93E-04
22GO:0052692: raffinose alpha-galactosidase activity2.93E-04
23GO:0004557: alpha-galactosidase activity2.93E-04
24GO:0008080: N-acetyltransferase activity4.18E-04
25GO:0004792: thiosulfate sulfurtransferase activity4.23E-04
26GO:0035198: miRNA binding4.23E-04
27GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor4.23E-04
28GO:0016851: magnesium chelatase activity4.23E-04
29GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds5.65E-04
30GO:0009044: xylan 1,4-beta-xylosidase activity5.65E-04
31GO:0046556: alpha-L-arabinofuranosidase activity5.65E-04
32GO:0004045: aminoacyl-tRNA hydrolase activity5.65E-04
33GO:0016773: phosphotransferase activity, alcohol group as acceptor7.14E-04
34GO:0004040: amidase activity7.14E-04
35GO:0016788: hydrolase activity, acting on ester bonds1.08E-03
36GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.76E-03
37GO:0016844: strictosidine synthase activity2.01E-03
38GO:0047372: acylglycerol lipase activity2.46E-03
39GO:0003725: double-stranded RNA binding2.94E-03
40GO:0031072: heat shock protein binding2.94E-03
41GO:0008266: poly(U) RNA binding3.19E-03
42GO:0016491: oxidoreductase activity3.66E-03
43GO:0003756: protein disulfide isomerase activity5.43E-03
44GO:0003743: translation initiation factor activity5.73E-03
45GO:0048038: quinone binding7.38E-03
46GO:0046982: protein heterodimerization activity7.45E-03
47GO:0016787: hydrolase activity7.65E-03
48GO:0052689: carboxylic ester hydrolase activity1.04E-02
49GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.11E-02
50GO:0008236: serine-type peptidase activity1.11E-02
51GO:0003746: translation elongation factor activity1.36E-02
52GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.36E-02
53GO:0015171: amino acid transmembrane transporter activity2.16E-02
54GO:0051082: unfolded protein binding2.58E-02
55GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.09E-02
56GO:0030246: carbohydrate binding3.33E-02
57GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.52E-02
58GO:0042802: identical protein binding4.52E-02
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Gene type



Gene DE type