Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G11490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:0009583: detection of light stimulus0.00E+00
4GO:0072387: flavin adenine dinucleotide metabolic process2.08E-05
5GO:0051247: positive regulation of protein metabolic process2.08E-05
6GO:2000905: negative regulation of starch metabolic process2.08E-05
7GO:0090610: bundle sheath cell fate specification2.08E-05
8GO:0010617: circadian regulation of calcium ion oscillation5.37E-05
9GO:0099402: plant organ development5.37E-05
10GO:0001736: establishment of planar polarity5.37E-05
11GO:0010343: singlet oxygen-mediated programmed cell death5.37E-05
12GO:1901529: positive regulation of anion channel activity5.37E-05
13GO:0048586: regulation of long-day photoperiodism, flowering9.50E-05
14GO:1902448: positive regulation of shade avoidance9.50E-05
15GO:1901672: positive regulation of systemic acquired resistance9.50E-05
16GO:0009650: UV protection1.42E-04
17GO:1901332: negative regulation of lateral root development1.42E-04
18GO:0009067: aspartate family amino acid biosynthetic process1.42E-04
19GO:0010029: regulation of seed germination1.58E-04
20GO:1902347: response to strigolactone1.95E-04
21GO:2000306: positive regulation of photomorphogenesis1.95E-04
22GO:0010117: photoprotection2.51E-04
23GO:0046283: anthocyanin-containing compound metabolic process2.51E-04
24GO:0071493: cellular response to UV-B2.51E-04
25GO:0060918: auxin transport3.11E-04
26GO:1902456: regulation of stomatal opening3.11E-04
27GO:0009959: negative gravitropism3.11E-04
28GO:1901371: regulation of leaf morphogenesis3.11E-04
29GO:0009088: threonine biosynthetic process3.73E-04
30GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.73E-04
31GO:0010310: regulation of hydrogen peroxide metabolic process3.73E-04
32GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.73E-04
33GO:0051510: regulation of unidimensional cell growth4.37E-04
34GO:0010161: red light signaling pathway4.37E-04
35GO:0009850: auxin metabolic process5.05E-04
36GO:0070413: trehalose metabolism in response to stress5.05E-04
37GO:0010100: negative regulation of photomorphogenesis5.74E-04
38GO:0010099: regulation of photomorphogenesis5.74E-04
39GO:0009740: gibberellic acid mediated signaling pathway5.83E-04
40GO:0009416: response to light stimulus6.22E-04
41GO:0006783: heme biosynthetic process6.45E-04
42GO:1900426: positive regulation of defense response to bacterium7.18E-04
43GO:0009638: phototropism7.18E-04
44GO:0048829: root cap development7.94E-04
45GO:0009089: lysine biosynthetic process via diaminopimelate8.71E-04
46GO:0048765: root hair cell differentiation8.71E-04
47GO:0010075: regulation of meristem growth1.03E-03
48GO:0009785: blue light signaling pathway1.03E-03
49GO:2000377: regulation of reactive oxygen species metabolic process1.38E-03
50GO:0005992: trehalose biosynthetic process1.38E-03
51GO:0010187: negative regulation of seed germination1.38E-03
52GO:0003333: amino acid transmembrane transport1.56E-03
53GO:0009686: gibberellin biosynthetic process1.76E-03
54GO:0070417: cellular response to cold1.96E-03
55GO:0010118: stomatal movement2.07E-03
56GO:0009958: positive gravitropism2.17E-03
57GO:0042752: regulation of circadian rhythm2.28E-03
58GO:0009646: response to absence of light2.28E-03
59GO:0015995: chlorophyll biosynthetic process3.58E-03
60GO:0018298: protein-chromophore linkage3.84E-03
61GO:0010311: lateral root formation3.97E-03
62GO:0010218: response to far red light4.10E-03
63GO:0006865: amino acid transport4.37E-03
64GO:0009637: response to blue light4.51E-03
65GO:0009853: photorespiration4.51E-03
66GO:0010114: response to red light5.37E-03
67GO:0009926: auxin polar transport5.37E-03
68GO:0051707: response to other organism5.37E-03
69GO:0009640: photomorphogenesis5.37E-03
70GO:0009644: response to high light intensity5.66E-03
71GO:0042538: hyperosmotic salinity response6.27E-03
72GO:0009909: regulation of flower development7.07E-03
73GO:0006355: regulation of transcription, DNA-templated8.08E-03
74GO:0009624: response to nematode8.42E-03
75GO:0051726: regulation of cell cycle8.77E-03
76GO:0009414: response to water deprivation9.91E-03
77GO:0007623: circadian rhythm1.24E-02
78GO:0010228: vegetative to reproductive phase transition of meristem1.28E-02
79GO:0010468: regulation of gene expression1.40E-02
80GO:0007049: cell cycle1.82E-02
81GO:0009723: response to ethylene1.87E-02
82GO:0048366: leaf development1.89E-02
83GO:0046777: protein autophosphorylation2.06E-02
84GO:0009737: response to abscisic acid2.17E-02
85GO:0045892: negative regulation of transcription, DNA-templated2.25E-02
86GO:0016310: phosphorylation2.50E-02
87GO:0016042: lipid catabolic process2.54E-02
88GO:0006629: lipid metabolic process2.59E-02
89GO:0016567: protein ubiquitination3.10E-02
90GO:0006351: transcription, DNA-templated3.11E-02
91GO:0009734: auxin-activated signaling pathway3.31E-02
92GO:0009738: abscisic acid-activated signaling pathway3.81E-02
93GO:0009555: pollen development3.90E-02
94GO:0051301: cell division4.14E-02
95GO:0055085: transmembrane transport4.62E-02
RankGO TermAdjusted P value
1GO:0052638: indole-3-butyrate beta-glucosyltransferase activity2.08E-05
2GO:0010313: phytochrome binding2.08E-05
3GO:0009882: blue light photoreceptor activity1.42E-04
4GO:0004072: aspartate kinase activity1.42E-04
5GO:0010011: auxin binding1.95E-04
6GO:0010328: auxin influx transmembrane transporter activity1.95E-04
7GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.74E-04
8GO:0071949: FAD binding6.45E-04
9GO:0004805: trehalose-phosphatase activity7.94E-04
10GO:0042802: identical protein binding1.30E-03
11GO:0003727: single-stranded RNA binding1.86E-03
12GO:0008514: organic anion transmembrane transporter activity1.86E-03
13GO:0019901: protein kinase binding2.39E-03
14GO:0016791: phosphatase activity2.85E-03
15GO:0016597: amino acid binding3.08E-03
16GO:0003700: transcription factor activity, sequence-specific DNA binding3.14E-03
17GO:0004806: triglyceride lipase activity3.58E-03
18GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.10E-03
19GO:0003993: acid phosphatase activity4.65E-03
20GO:0015293: symporter activity5.81E-03
21GO:0015171: amino acid transmembrane transporter activity7.07E-03
22GO:0080043: quercetin 3-O-glucosyltransferase activity7.90E-03
23GO:0080044: quercetin 7-O-glucosyltransferase activity7.90E-03
24GO:0016758: transferase activity, transferring hexosyl groups9.67E-03
25GO:0015144: carbohydrate transmembrane transporter activity1.12E-02
26GO:0005351: sugar:proton symporter activity1.22E-02
27GO:0008194: UDP-glycosyltransferase activity1.34E-02
28GO:0046872: metal ion binding1.51E-02
29GO:0046982: protein heterodimerization activity1.66E-02
30GO:0042803: protein homodimerization activity2.31E-02
31GO:0004871: signal transducer activity2.31E-02
32GO:0004722: protein serine/threonine phosphatase activity2.38E-02
33GO:0016757: transferase activity, transferring glycosyl groups3.46E-02
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Gene type



Gene DE type