co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G10870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042794: rRNA transcription from plastid promoter	0.00E+00
2	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
3	GO:0033206: meiotic cytokinesis	1.48E-05
4	GO:1903866: palisade mesophyll development	1.48E-05
5	GO:0009967: positive regulation of signal transduction	3.88E-05
6	GO:0090391: granum assembly	6.95E-05
7	GO:0010476: gibberellin mediated signaling pathway	6.95E-05
8	GO:0010027: thylakoid membrane organization	9.42E-05
9	GO:0033014: tetrapyrrole biosynthetic process	1.05E-04
10	GO:1901332: negative regulation of lateral root development	1.05E-04
11	GO:0042793: transcription from plastid promoter	2.34E-04
12	GO:0042176: regulation of protein catabolic process	2.34E-04
13	GO:0000911: cytokinesis by cell plate formation	2.82E-04
14	GO:2000033: regulation of seed dormancy process	2.82E-04
15	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	3.84E-04
16	GO:0042255: ribosome assembly	3.84E-04
17	GO:0006353: DNA-templated transcription, termination	3.84E-04
18	GO:0006783: heme biosynthetic process	4.93E-04
19	GO:0009089: lysine biosynthetic process via diaminopimelate	6.67E-04
20	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.29E-04
21	GO:0009767: photosynthetic electron transport chain	7.91E-04
22	GO:0010102: lateral root morphogenesis	7.91E-04
23	GO:0010540: basipetal auxin transport	8.55E-04
24	GO:0010187: negative regulation of seed germination	1.05E-03
25	GO:2000377: regulation of reactive oxygen species metabolic process	1.05E-03
26	GO:0000027: ribosomal large subunit assembly	1.05E-03
27	GO:0009863: salicylic acid mediated signaling pathway	1.05E-03
28	GO:0019748: secondary metabolic process	1.26E-03
29	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.34E-03
30	GO:0071215: cellular response to abscisic acid stimulus	1.34E-03
31	GO:0009306: protein secretion	1.41E-03
32	GO:0010501: RNA secondary structure unwinding	1.57E-03
33	GO:0009749: response to glucose	1.81E-03
34	GO:0009791: post-embryonic development	1.81E-03
35	GO:0032502: developmental process	1.98E-03
36	GO:0010090: trichome morphogenesis	2.07E-03
37	GO:0010252: auxin homeostasis	2.15E-03
38	GO:0010029: regulation of seed germination	2.52E-03
39	GO:0015995: chlorophyll biosynthetic process	2.70E-03
40	GO:0048767: root hair elongation	3.00E-03
41	GO:0010218: response to far red light	3.09E-03
42	GO:0009867: jasmonic acid mediated signaling pathway	3.40E-03
43	GO:0009926: auxin polar transport	4.04E-03
44	GO:0009965: leaf morphogenesis	4.37E-03
45	GO:0042538: hyperosmotic salinity response	4.71E-03
46	GO:0006417: regulation of translation	5.31E-03
47	GO:0009740: gibberellic acid mediated signaling pathway	6.05E-03
48	GO:0006412: translation	6.97E-03
49	GO:0009845: seed germination	7.79E-03
50	GO:0009790: embryo development	8.21E-03
51	GO:0010228: vegetative to reproductive phase transition of meristem	9.53E-03
52	GO:0009739: response to gibberellin	9.99E-03
53	GO:0007166: cell surface receptor signaling pathway	1.01E-02
54	GO:0008380: RNA splicing	1.04E-02
55	GO:0009658: chloroplast organization	1.25E-02
56	GO:0042254: ribosome biogenesis	1.27E-02
57	GO:0009723: response to ethylene	1.39E-02
58	GO:0046777: protein autophosphorylation	1.53E-02
59	GO:0016042: lipid catabolic process	1.89E-02
60	GO:0009734: auxin-activated signaling pathway	2.46E-02
61	GO:0009416: response to light stimulus	2.90E-02
62	GO:0006355: regulation of transcription, DNA-templated	2.97E-02
63	GO:0051301: cell division	3.08E-02
64	GO:0055085: transmembrane transport	3.44E-02
65	GO:0071555: cell wall organization	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0008836: diaminopimelate decarboxylase activity	1.48E-05
2	GO:0005078: MAP-kinase scaffold activity	3.88E-05
3	GO:0032947: protein complex scaffold	6.95E-05
4	GO:0070181: small ribosomal subunit rRNA binding	6.95E-05
5	GO:0043495: protein anchor	1.45E-04
6	GO:0000989: transcription factor activity, transcription factor binding	4.93E-04
7	GO:0009672: auxin:proton symporter activity	5.49E-04
8	GO:0010329: auxin efflux transmembrane transporter activity	7.91E-04
9	GO:0003727: single-stranded RNA binding	1.41E-03
10	GO:0001085: RNA polymerase II transcription factor binding	1.65E-03
11	GO:0010181: FMN binding	1.73E-03
12	GO:0003735: structural constituent of ribosome	2.06E-03
13	GO:0004004: ATP-dependent RNA helicase activity	2.70E-03
14	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.90E-03
15	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.20E-03
16	GO:0004185: serine-type carboxypeptidase activity	4.04E-03
17	GO:0003690: double-stranded DNA binding	5.07E-03
18	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.68E-03
19	GO:0004650: polygalacturonase activity	5.93E-03
20	GO:0004674: protein serine/threonine kinase activity	6.48E-03
21	GO:0008026: ATP-dependent helicase activity	6.57E-03
22	GO:0019843: rRNA binding	7.37E-03
23	GO:0016829: lyase activity	7.79E-03
24	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	8.07E-03
25	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.79E-03
26	GO:0046983: protein dimerization activity	8.89E-03
27	GO:0004672: protein kinase activity	9.79E-03
28	GO:0016788: hydrolase activity, acting on ester bonds	1.27E-02
29	GO:0003682: chromatin binding	1.31E-02
30	GO:0052689: carboxylic ester hydrolase activity	1.57E-02
31	GO:0004871: signal transducer activity	1.72E-02
32	GO:0000166: nucleotide binding	2.90E-02
33	GO:0016301: kinase activity	3.06E-02
34	GO:0030246: carbohydrate binding	3.58E-02
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.44E-02
36	GO:0005509: calcium ion binding	4.53E-02
37	GO:0005515: protein binding	4.70E-02
38	GO:0044212: transcription regulatory region DNA binding	4.79E-02