Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G10640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:0015690: aluminum cation transport0.00E+00
6GO:0070328: triglyceride homeostasis0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002376: immune system process0.00E+00
9GO:0055091: phospholipid homeostasis0.00E+00
10GO:0010324: membrane invagination0.00E+00
11GO:0010200: response to chitin5.88E-11
12GO:0019725: cellular homeostasis4.15E-06
13GO:0031348: negative regulation of defense response7.65E-06
14GO:0009751: response to salicylic acid1.00E-05
15GO:0000187: activation of MAPK activity3.30E-05
16GO:0006468: protein phosphorylation4.20E-05
17GO:0060548: negative regulation of cell death5.93E-05
18GO:0009266: response to temperature stimulus6.71E-05
19GO:0009626: plant-type hypersensitive response6.89E-05
20GO:0010225: response to UV-C9.36E-05
21GO:0009863: salicylic acid mediated signaling pathway1.11E-04
22GO:0009759: indole glucosinolate biosynthetic process1.36E-04
23GO:2000037: regulation of stomatal complex patterning1.85E-04
24GO:0006952: defense response3.00E-04
25GO:0048482: plant ovule morphogenesis3.02E-04
26GO:0010365: positive regulation of ethylene biosynthetic process3.02E-04
27GO:0051938: L-glutamate import3.02E-04
28GO:0051245: negative regulation of cellular defense response3.02E-04
29GO:0019567: arabinose biosynthetic process3.02E-04
30GO:0010421: hydrogen peroxide-mediated programmed cell death3.02E-04
31GO:0006562: proline catabolic process3.02E-04
32GO:0007229: integrin-mediated signaling pathway3.02E-04
33GO:1901183: positive regulation of camalexin biosynthetic process3.02E-04
34GO:0009270: response to humidity3.02E-04
35GO:0050691: regulation of defense response to virus by host3.02E-04
36GO:2000031: regulation of salicylic acid mediated signaling pathway3.75E-04
37GO:0042742: defense response to bacterium4.89E-04
38GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.34E-04
39GO:0015802: basic amino acid transport6.60E-04
40GO:0010618: aerenchyma formation6.60E-04
41GO:0055088: lipid homeostasis6.60E-04
42GO:0043091: L-arginine import6.60E-04
43GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.60E-04
44GO:0010133: proline catabolic process to glutamate6.60E-04
45GO:0010229: inflorescence development9.29E-04
46GO:0046777: protein autophosphorylation1.00E-03
47GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.07E-03
48GO:0034051: negative regulation of plant-type hypersensitive response1.07E-03
49GO:0009062: fatty acid catabolic process1.07E-03
50GO:1900140: regulation of seedling development1.07E-03
51GO:0045793: positive regulation of cell size1.07E-03
52GO:0072661: protein targeting to plasma membrane1.07E-03
53GO:0010186: positive regulation of cellular defense response1.07E-03
54GO:0046621: negative regulation of organ growth1.07E-03
55GO:0070301: cellular response to hydrogen peroxide1.53E-03
56GO:0072583: clathrin-dependent endocytosis1.53E-03
57GO:0006537: glutamate biosynthetic process1.53E-03
58GO:0010148: transpiration1.53E-03
59GO:0006612: protein targeting to membrane1.53E-03
60GO:0002679: respiratory burst involved in defense response1.53E-03
61GO:0015696: ammonium transport1.53E-03
62GO:0051289: protein homotetramerization1.53E-03
63GO:0046836: glycolipid transport1.53E-03
64GO:0055089: fatty acid homeostasis1.53E-03
65GO:0048194: Golgi vesicle budding1.53E-03
66GO:0007166: cell surface receptor signaling pathway1.81E-03
67GO:0009814: defense response, incompatible interaction1.90E-03
68GO:0071456: cellular response to hypoxia1.90E-03
69GO:0046345: abscisic acid catabolic process2.06E-03
70GO:0010483: pollen tube reception2.06E-03
71GO:0009652: thigmotropism2.06E-03
72GO:0045088: regulation of innate immune response2.06E-03
73GO:1902584: positive regulation of response to water deprivation2.06E-03
74GO:0072488: ammonium transmembrane transport2.06E-03
75GO:0010363: regulation of plant-type hypersensitive response2.06E-03
76GO:0006621: protein retention in ER lumen2.06E-03
77GO:0033356: UDP-L-arabinose metabolic process2.06E-03
78GO:1901002: positive regulation of response to salt stress2.06E-03
79GO:2000038: regulation of stomatal complex development2.06E-03
80GO:0080142: regulation of salicylic acid biosynthetic process2.06E-03
81GO:1901141: regulation of lignin biosynthetic process2.06E-03
82GO:0009625: response to insect2.07E-03
83GO:0010227: floral organ abscission2.07E-03
84GO:0031347: regulation of defense response2.08E-03
85GO:0045927: positive regulation of growth2.63E-03
86GO:0034052: positive regulation of plant-type hypersensitive response2.63E-03
87GO:0009697: salicylic acid biosynthetic process2.63E-03
88GO:0009737: response to abscisic acid3.00E-03
89GO:0009646: response to absence of light3.05E-03
90GO:0048317: seed morphogenesis3.24E-03
91GO:0010942: positive regulation of cell death3.24E-03
92GO:0008654: phospholipid biosynthetic process3.27E-03
93GO:0009620: response to fungus3.33E-03
94GO:0010193: response to ozone3.50E-03
95GO:0018105: peptidyl-serine phosphorylation3.88E-03
96GO:0010310: regulation of hydrogen peroxide metabolic process3.90E-03
97GO:0034389: lipid particle organization3.90E-03
98GO:0042372: phylloquinone biosynthetic process3.90E-03
99GO:0009094: L-phenylalanine biosynthetic process3.90E-03
100GO:0045926: negative regulation of growth3.90E-03
101GO:0009612: response to mechanical stimulus3.90E-03
102GO:0010161: red light signaling pathway4.60E-03
103GO:0071446: cellular response to salicylic acid stimulus4.60E-03
104GO:1900056: negative regulation of leaf senescence4.60E-03
105GO:0080186: developmental vegetative growth4.60E-03
106GO:0071669: plant-type cell wall organization or biogenesis4.60E-03
107GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.60E-03
108GO:0035556: intracellular signal transduction5.31E-03
109GO:0035265: organ growth5.35E-03
110GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.35E-03
111GO:0032875: regulation of DNA endoreduplication5.35E-03
112GO:0045892: negative regulation of transcription, DNA-templated5.37E-03
113GO:0010099: regulation of photomorphogenesis6.13E-03
114GO:0010120: camalexin biosynthetic process6.13E-03
115GO:0030968: endoplasmic reticulum unfolded protein response6.13E-03
116GO:0009832: plant-type cell wall biogenesis6.94E-03
117GO:0009835: fruit ripening6.95E-03
118GO:0046685: response to arsenic-containing substance6.95E-03
119GO:0051865: protein autoubiquitination6.95E-03
120GO:0009056: catabolic process6.95E-03
121GO:0010150: leaf senescence7.49E-03
122GO:0010119: regulation of stomatal movement7.65E-03
123GO:1900426: positive regulation of defense response to bacterium7.80E-03
124GO:0009867: jasmonic acid mediated signaling pathway8.39E-03
125GO:0007064: mitotic sister chromatid cohesion8.70E-03
126GO:0043069: negative regulation of programmed cell death8.70E-03
127GO:0009682: induced systemic resistance9.63E-03
128GO:0052544: defense response by callose deposition in cell wall9.63E-03
129GO:0006887: exocytosis9.98E-03
130GO:0008361: regulation of cell size1.06E-02
131GO:0012501: programmed cell death1.06E-02
132GO:0002213: defense response to insect1.06E-02
133GO:0015706: nitrate transport1.06E-02
134GO:0010105: negative regulation of ethylene-activated signaling pathway1.06E-02
135GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.06E-02
136GO:0051707: response to other organism1.08E-02
137GO:0055046: microgametogenesis1.16E-02
138GO:0002237: response to molecule of bacterial origin1.26E-02
139GO:0007034: vacuolar transport1.26E-02
140GO:0000165: MAPK cascade1.31E-02
141GO:0009969: xyloglucan biosynthetic process1.37E-02
142GO:0010167: response to nitrate1.37E-02
143GO:0070588: calcium ion transmembrane transport1.37E-02
144GO:0046854: phosphatidylinositol phosphorylation1.37E-02
145GO:0006486: protein glycosylation1.46E-02
146GO:0009116: nucleoside metabolic process1.59E-02
147GO:0080147: root hair cell development1.59E-02
148GO:0005992: trehalose biosynthetic process1.59E-02
149GO:0006979: response to oxidative stress1.67E-02
150GO:0080167: response to karrikin1.72E-02
151GO:0009611: response to wounding1.77E-02
152GO:0019915: lipid storage1.82E-02
153GO:0009269: response to desiccation1.82E-02
154GO:0048278: vesicle docking1.82E-02
155GO:0003333: amino acid transmembrane transport1.82E-02
156GO:0016226: iron-sulfur cluster assembly1.95E-02
157GO:2000022: regulation of jasmonic acid mediated signaling pathway1.95E-02
158GO:0009693: ethylene biosynthetic process2.07E-02
159GO:0009624: response to nematode2.09E-02
160GO:0007165: signal transduction2.18E-02
161GO:0009742: brassinosteroid mediated signaling pathway2.21E-02
162GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.33E-02
163GO:0042147: retrograde transport, endosome to Golgi2.33E-02
164GO:0070417: cellular response to cold2.33E-02
165GO:0009741: response to brassinosteroid2.59E-02
166GO:0010197: polar nucleus fusion2.59E-02
167GO:0061025: membrane fusion2.73E-02
168GO:0006891: intra-Golgi vesicle-mediated transport3.01E-02
169GO:0006635: fatty acid beta-oxidation3.01E-02
170GO:0009753: response to jasmonic acid3.06E-02
171GO:0016032: viral process3.16E-02
172GO:0030163: protein catabolic process3.31E-02
173GO:0006904: vesicle docking involved in exocytosis3.61E-02
174GO:0051607: defense response to virus3.76E-02
175GO:0009911: positive regulation of flower development3.92E-02
176GO:0001666: response to hypoxia3.92E-02
177GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.03E-02
178GO:0010029: regulation of seed germination4.07E-02
179GO:0009816: defense response to bacterium, incompatible interaction4.07E-02
180GO:0006470: protein dephosphorylation4.12E-02
181GO:0050832: defense response to fungus4.19E-02
182GO:0009627: systemic acquired resistance4.24E-02
183GO:0042128: nitrate assimilation4.24E-02
184GO:0006906: vesicle fusion4.24E-02
185GO:0010468: regulation of gene expression4.30E-02
186GO:0009617: response to bacterium4.30E-02
187GO:0016567: protein ubiquitination4.37E-02
188GO:0048573: photoperiodism, flowering4.40E-02
189GO:0016311: dephosphorylation4.56E-02
190GO:0016049: cell growth4.56E-02
191GO:0009414: response to water deprivation4.65E-02
192GO:0030244: cellulose biosynthetic process4.73E-02
193GO:0008219: cell death4.73E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
3GO:0005046: KDEL sequence binding0.00E+00
4GO:0016301: kinase activity8.68E-06
5GO:0005509: calcium ion binding9.73E-05
6GO:0032050: clathrin heavy chain binding3.02E-04
7GO:0008809: carnitine racemase activity3.02E-04
8GO:2001227: quercitrin binding3.02E-04
9GO:0015085: calcium ion transmembrane transporter activity3.02E-04
10GO:0050308: sugar-phosphatase activity3.02E-04
11GO:0004657: proline dehydrogenase activity3.02E-04
12GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.02E-04
13GO:2001147: camalexin binding3.02E-04
14GO:0031127: alpha-(1,2)-fucosyltransferase activity3.02E-04
15GO:0004708: MAP kinase kinase activity3.05E-04
16GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.46E-04
17GO:0005515: protein binding6.18E-04
18GO:0052691: UDP-arabinopyranose mutase activity6.60E-04
19GO:0009931: calcium-dependent protein serine/threonine kinase activity7.27E-04
20GO:0004683: calmodulin-dependent protein kinase activity7.77E-04
21GO:0005524: ATP binding7.86E-04
22GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.32E-03
23GO:0015189: L-lysine transmembrane transporter activity1.53E-03
24GO:0017089: glycolipid transporter activity1.53E-03
25GO:0015181: arginine transmembrane transporter activity1.53E-03
26GO:0004165: dodecenoyl-CoA delta-isomerase activity1.53E-03
27GO:0043424: protein histidine kinase binding1.58E-03
28GO:0004664: prephenate dehydratase activity2.06E-03
29GO:0051861: glycolipid binding2.06E-03
30GO:0046923: ER retention sequence binding2.06E-03
31GO:0005313: L-glutamate transmembrane transporter activity2.06E-03
32GO:0043495: protein anchor2.06E-03
33GO:0016866: intramolecular transferase activity2.06E-03
34GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.06E-03
35GO:0047769: arogenate dehydratase activity2.06E-03
36GO:0010294: abscisic acid glucosyltransferase activity2.63E-03
37GO:0004623: phospholipase A2 activity2.63E-03
38GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.63E-03
39GO:0005516: calmodulin binding2.94E-03
40GO:0004605: phosphatidate cytidylyltransferase activity3.24E-03
41GO:0008519: ammonium transmembrane transporter activity3.24E-03
42GO:0004012: phospholipid-translocating ATPase activity3.90E-03
43GO:0004656: procollagen-proline 4-dioxygenase activity3.90E-03
44GO:0043565: sequence-specific DNA binding3.97E-03
45GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.60E-03
46GO:0043295: glutathione binding4.60E-03
47GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity5.35E-03
48GO:0005544: calcium-dependent phospholipid binding5.35E-03
49GO:0004869: cysteine-type endopeptidase inhibitor activity5.35E-03
50GO:0004714: transmembrane receptor protein tyrosine kinase activity5.35E-03
51GO:0004806: triglyceride lipase activity5.97E-03
52GO:0004721: phosphoprotein phosphatase activity5.97E-03
53GO:0004430: 1-phosphatidylinositol 4-kinase activity6.13E-03
54GO:0016740: transferase activity6.84E-03
55GO:0008417: fucosyltransferase activity6.95E-03
56GO:0015174: basic amino acid transmembrane transporter activity7.80E-03
57GO:0047617: acyl-CoA hydrolase activity7.80E-03
58GO:0015112: nitrate transmembrane transporter activity7.80E-03
59GO:0004805: trehalose-phosphatase activity8.70E-03
60GO:0030234: enzyme regulator activity8.70E-03
61GO:0004674: protein serine/threonine kinase activity8.80E-03
62GO:0004712: protein serine/threonine/tyrosine kinase activity9.16E-03
63GO:0005543: phospholipid binding9.63E-03
64GO:0004672: protein kinase activity1.12E-02
65GO:0005388: calcium-transporting ATPase activity1.16E-02
66GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.16E-02
67GO:0004190: aspartic-type endopeptidase activity1.37E-02
68GO:0016298: lipase activity1.52E-02
69GO:0043130: ubiquitin binding1.59E-02
70GO:0004707: MAP kinase activity1.82E-02
71GO:0033612: receptor serine/threonine kinase binding1.82E-02
72GO:0015035: protein disulfide oxidoreductase activity2.15E-02
73GO:0003924: GTPase activity2.80E-02
74GO:0004842: ubiquitin-protein transferase activity2.84E-02
75GO:0004872: receptor activity2.87E-02
76GO:0009055: electron carrier activity3.06E-02
77GO:0004197: cysteine-type endopeptidase activity3.16E-02
78GO:0016597: amino acid binding3.76E-02
79GO:0042802: identical protein binding4.57E-02
80GO:0044212: transcription regulatory region DNA binding4.81E-02
81GO:0015238: drug transmembrane transporter activity4.90E-02
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Gene type



Gene DE type