GO Enrichment Analysis of Co-expressed Genes with
AT3G10405
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006573: valine metabolic process | 0.00E+00 |
| 2 | GO:0090697: post-embryonic plant organ morphogenesis | 0.00E+00 |
| 3 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 4 | GO:2000469: negative regulation of peroxidase activity | 0.00E+00 |
| 5 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 6 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 7 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 8 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.43E-05 |
| 9 | GO:0007155: cell adhesion | 2.48E-04 |
| 10 | GO:0031426: polycistronic mRNA processing | 2.63E-04 |
| 11 | GO:0000481: maturation of 5S rRNA | 2.63E-04 |
| 12 | GO:0006551: leucine metabolic process | 2.63E-04 |
| 13 | GO:0043686: co-translational protein modification | 2.63E-04 |
| 14 | GO:0046167: glycerol-3-phosphate biosynthetic process | 2.63E-04 |
| 15 | GO:0043007: maintenance of rDNA | 2.63E-04 |
| 16 | GO:1902458: positive regulation of stomatal opening | 2.63E-04 |
| 17 | GO:0034337: RNA folding | 2.63E-04 |
| 18 | GO:1902334: fructose export from vacuole to cytoplasm | 2.63E-04 |
| 19 | GO:0010362: negative regulation of anion channel activity by blue light | 2.63E-04 |
| 20 | GO:0015969: guanosine tetraphosphate metabolic process | 2.63E-04 |
| 21 | GO:0009641: shade avoidance | 5.12E-04 |
| 22 | GO:0006650: glycerophospholipid metabolic process | 5.78E-04 |
| 23 | GO:0030187: melatonin biosynthetic process | 5.78E-04 |
| 24 | GO:0010541: acropetal auxin transport | 5.78E-04 |
| 25 | GO:0010155: regulation of proton transport | 5.78E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.78E-04 |
| 27 | GO:0015790: UDP-xylose transport | 5.78E-04 |
| 28 | GO:0044550: secondary metabolite biosynthetic process | 7.23E-04 |
| 29 | GO:0048527: lateral root development | 8.24E-04 |
| 30 | GO:0010143: cutin biosynthetic process | 8.62E-04 |
| 31 | GO:0010160: formation of animal organ boundary | 9.39E-04 |
| 32 | GO:0080055: low-affinity nitrate transport | 9.39E-04 |
| 33 | GO:0006696: ergosterol biosynthetic process | 9.39E-04 |
| 34 | GO:0046168: glycerol-3-phosphate catabolic process | 9.39E-04 |
| 35 | GO:0009405: pathogenesis | 9.39E-04 |
| 36 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.34E-03 |
| 37 | GO:1990019: protein storage vacuole organization | 1.34E-03 |
| 38 | GO:0046739: transport of virus in multicellular host | 1.34E-03 |
| 39 | GO:0010239: chloroplast mRNA processing | 1.34E-03 |
| 40 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.34E-03 |
| 41 | GO:0006072: glycerol-3-phosphate metabolic process | 1.34E-03 |
| 42 | GO:0009647: skotomorphogenesis | 1.34E-03 |
| 43 | GO:0009649: entrainment of circadian clock | 1.79E-03 |
| 44 | GO:0008295: spermidine biosynthetic process | 1.79E-03 |
| 45 | GO:0032366: intracellular sterol transport | 1.79E-03 |
| 46 | GO:0006021: inositol biosynthetic process | 1.79E-03 |
| 47 | GO:0048442: sepal development | 1.79E-03 |
| 48 | GO:0031122: cytoplasmic microtubule organization | 1.79E-03 |
| 49 | GO:0048443: stamen development | 1.84E-03 |
| 50 | GO:0006857: oligopeptide transport | 2.01E-03 |
| 51 | GO:0046283: anthocyanin-containing compound metabolic process | 2.29E-03 |
| 52 | GO:0009904: chloroplast accumulation movement | 2.29E-03 |
| 53 | GO:0010236: plastoquinone biosynthetic process | 2.29E-03 |
| 54 | GO:0031365: N-terminal protein amino acid modification | 2.29E-03 |
| 55 | GO:1902183: regulation of shoot apical meristem development | 2.29E-03 |
| 56 | GO:0010158: abaxial cell fate specification | 2.29E-03 |
| 57 | GO:0006465: signal peptide processing | 2.29E-03 |
| 58 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.29E-03 |
| 59 | GO:0055114: oxidation-reduction process | 2.44E-03 |
| 60 | GO:0007018: microtubule-based movement | 2.50E-03 |
| 61 | GO:0046855: inositol phosphate dephosphorylation | 2.82E-03 |
| 62 | GO:0009643: photosynthetic acclimation | 2.82E-03 |
| 63 | GO:0006751: glutathione catabolic process | 2.82E-03 |
| 64 | GO:0060918: auxin transport | 2.82E-03 |
| 65 | GO:1902456: regulation of stomatal opening | 2.82E-03 |
| 66 | GO:0010583: response to cyclopentenone | 3.06E-03 |
| 67 | GO:0010076: maintenance of floral meristem identity | 3.40E-03 |
| 68 | GO:0009082: branched-chain amino acid biosynthetic process | 3.40E-03 |
| 69 | GO:0048280: vesicle fusion with Golgi apparatus | 3.40E-03 |
| 70 | GO:0009099: valine biosynthetic process | 3.40E-03 |
| 71 | GO:0009903: chloroplast avoidance movement | 3.40E-03 |
| 72 | GO:0009854: oxidative photosynthetic carbon pathway | 3.40E-03 |
| 73 | GO:0010019: chloroplast-nucleus signaling pathway | 3.40E-03 |
| 74 | GO:0009648: photoperiodism | 3.40E-03 |
| 75 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 4.00E-03 |
| 76 | GO:0006400: tRNA modification | 4.00E-03 |
| 77 | GO:0030307: positive regulation of cell growth | 4.00E-03 |
| 78 | GO:0043068: positive regulation of programmed cell death | 4.65E-03 |
| 79 | GO:0032508: DNA duplex unwinding | 4.65E-03 |
| 80 | GO:2000070: regulation of response to water deprivation | 4.65E-03 |
| 81 | GO:0016559: peroxisome fission | 4.65E-03 |
| 82 | GO:0015995: chlorophyll biosynthetic process | 4.87E-03 |
| 83 | GO:0009097: isoleucine biosynthetic process | 5.32E-03 |
| 84 | GO:0009932: cell tip growth | 5.32E-03 |
| 85 | GO:0015996: chlorophyll catabolic process | 5.32E-03 |
| 86 | GO:0007186: G-protein coupled receptor signaling pathway | 5.32E-03 |
| 87 | GO:0006811: ion transport | 5.95E-03 |
| 88 | GO:0048507: meristem development | 6.03E-03 |
| 89 | GO:2000024: regulation of leaf development | 6.03E-03 |
| 90 | GO:0009821: alkaloid biosynthetic process | 6.03E-03 |
| 91 | GO:0010119: regulation of stomatal movement | 6.23E-03 |
| 92 | GO:0009638: phototropism | 6.77E-03 |
| 93 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 6.77E-03 |
| 94 | GO:0009637: response to blue light | 6.83E-03 |
| 95 | GO:0048441: petal development | 7.54E-03 |
| 96 | GO:0043069: negative regulation of programmed cell death | 7.54E-03 |
| 97 | GO:0010192: mucilage biosynthetic process | 7.54E-03 |
| 98 | GO:0006896: Golgi to vacuole transport | 7.54E-03 |
| 99 | GO:0006995: cellular response to nitrogen starvation | 7.54E-03 |
| 100 | GO:0019538: protein metabolic process | 7.54E-03 |
| 101 | GO:0043085: positive regulation of catalytic activity | 8.35E-03 |
| 102 | GO:0009750: response to fructose | 8.35E-03 |
| 103 | GO:0016485: protein processing | 8.35E-03 |
| 104 | GO:0000038: very long-chain fatty acid metabolic process | 8.35E-03 |
| 105 | GO:0009640: photomorphogenesis | 8.82E-03 |
| 106 | GO:0045037: protein import into chloroplast stroma | 9.17E-03 |
| 107 | GO:0008361: regulation of cell size | 9.17E-03 |
| 108 | GO:0006790: sulfur compound metabolic process | 9.17E-03 |
| 109 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.17E-03 |
| 110 | GO:0008643: carbohydrate transport | 9.55E-03 |
| 111 | GO:0009785: blue light signaling pathway | 1.00E-02 |
| 112 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.00E-02 |
| 113 | GO:0009767: photosynthetic electron transport chain | 1.00E-02 |
| 114 | GO:0030048: actin filament-based movement | 1.00E-02 |
| 115 | GO:0010207: photosystem II assembly | 1.09E-02 |
| 116 | GO:0010223: secondary shoot formation | 1.09E-02 |
| 117 | GO:0009887: animal organ morphogenesis | 1.09E-02 |
| 118 | GO:0010540: basipetal auxin transport | 1.09E-02 |
| 119 | GO:0048440: carpel development | 1.09E-02 |
| 120 | GO:0006541: glutamine metabolic process | 1.09E-02 |
| 121 | GO:0010020: chloroplast fission | 1.09E-02 |
| 122 | GO:0019853: L-ascorbic acid biosynthetic process | 1.18E-02 |
| 123 | GO:0046854: phosphatidylinositol phosphorylation | 1.18E-02 |
| 124 | GO:0042343: indole glucosinolate metabolic process | 1.18E-02 |
| 125 | GO:0009416: response to light stimulus | 1.26E-02 |
| 126 | GO:0042753: positive regulation of circadian rhythm | 1.28E-02 |
| 127 | GO:0000162: tryptophan biosynthetic process | 1.28E-02 |
| 128 | GO:0000027: ribosomal large subunit assembly | 1.38E-02 |
| 129 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.38E-02 |
| 130 | GO:0007017: microtubule-based process | 1.48E-02 |
| 131 | GO:0051260: protein homooligomerization | 1.58E-02 |
| 132 | GO:0048511: rhythmic process | 1.58E-02 |
| 133 | GO:0098542: defense response to other organism | 1.58E-02 |
| 134 | GO:0019915: lipid storage | 1.58E-02 |
| 135 | GO:0048278: vesicle docking | 1.58E-02 |
| 136 | GO:0019748: secondary metabolic process | 1.68E-02 |
| 137 | GO:0009814: defense response, incompatible interaction | 1.68E-02 |
| 138 | GO:0009294: DNA mediated transformation | 1.79E-02 |
| 139 | GO:0071369: cellular response to ethylene stimulus | 1.79E-02 |
| 140 | GO:0071215: cellular response to abscisic acid stimulus | 1.79E-02 |
| 141 | GO:0009742: brassinosteroid mediated signaling pathway | 1.80E-02 |
| 142 | GO:0019722: calcium-mediated signaling | 1.90E-02 |
| 143 | GO:0009409: response to cold | 1.94E-02 |
| 144 | GO:0016117: carotenoid biosynthetic process | 2.01E-02 |
| 145 | GO:0042147: retrograde transport, endosome to Golgi | 2.01E-02 |
| 146 | GO:0009408: response to heat | 2.17E-02 |
| 147 | GO:0006281: DNA repair | 2.17E-02 |
| 148 | GO:0010154: fruit development | 2.24E-02 |
| 149 | GO:0006520: cellular amino acid metabolic process | 2.24E-02 |
| 150 | GO:0010182: sugar mediated signaling pathway | 2.24E-02 |
| 151 | GO:0045489: pectin biosynthetic process | 2.24E-02 |
| 152 | GO:0009958: positive gravitropism | 2.24E-02 |
| 153 | GO:0061025: membrane fusion | 2.36E-02 |
| 154 | GO:0009646: response to absence of light | 2.36E-02 |
| 155 | GO:0009749: response to glucose | 2.48E-02 |
| 156 | GO:0008654: phospholipid biosynthetic process | 2.48E-02 |
| 157 | GO:0006623: protein targeting to vacuole | 2.48E-02 |
| 158 | GO:0009791: post-embryonic development | 2.48E-02 |
| 159 | GO:0010183: pollen tube guidance | 2.48E-02 |
| 160 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.61E-02 |
| 161 | GO:0071554: cell wall organization or biogenesis | 2.61E-02 |
| 162 | GO:0016032: viral process | 2.73E-02 |
| 163 | GO:0007264: small GTPase mediated signal transduction | 2.73E-02 |
| 164 | GO:0007623: circadian rhythm | 2.94E-02 |
| 165 | GO:0009639: response to red or far red light | 2.99E-02 |
| 166 | GO:0010252: auxin homeostasis | 2.99E-02 |
| 167 | GO:0007267: cell-cell signaling | 3.12E-02 |
| 168 | GO:0010027: thylakoid membrane organization | 3.39E-02 |
| 169 | GO:0009617: response to bacterium | 3.51E-02 |
| 170 | GO:0006906: vesicle fusion | 3.66E-02 |
| 171 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.80E-02 |
| 172 | GO:0048573: photoperiodism, flowering | 3.80E-02 |
| 173 | GO:0016311: dephosphorylation | 3.95E-02 |
| 174 | GO:0030244: cellulose biosynthetic process | 4.09E-02 |
| 175 | GO:0018298: protein-chromophore linkage | 4.09E-02 |
| 176 | GO:0000160: phosphorelay signal transduction system | 4.24E-02 |
| 177 | GO:0010218: response to far red light | 4.38E-02 |
| 178 | GO:0009407: toxin catabolic process | 4.38E-02 |
| 179 | GO:0007568: aging | 4.53E-02 |
| 180 | GO:0009658: chloroplast organization | 4.54E-02 |
| 181 | GO:0009853: photorespiration | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0036033: mediator complex binding | 0.00E+00 |
| 6 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 7 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 8 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 9 | GO:0000293: ferric-chelate reductase activity | 1.09E-04 |
| 10 | GO:0008568: microtubule-severing ATPase activity | 2.63E-04 |
| 11 | GO:0016618: hydroxypyruvate reductase activity | 2.63E-04 |
| 12 | GO:0042586: peptide deformylase activity | 2.63E-04 |
| 13 | GO:0051996: squalene synthase activity | 2.63E-04 |
| 14 | GO:0003984: acetolactate synthase activity | 2.63E-04 |
| 15 | GO:0004328: formamidase activity | 2.63E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.63E-04 |
| 17 | GO:0035671: enone reductase activity | 2.63E-04 |
| 18 | GO:0046906: tetrapyrrole binding | 2.63E-04 |
| 19 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 2.63E-04 |
| 20 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.63E-04 |
| 21 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.63E-04 |
| 22 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 5.78E-04 |
| 23 | GO:0005353: fructose transmembrane transporter activity | 5.78E-04 |
| 24 | GO:0048531: beta-1,3-galactosyltransferase activity | 5.78E-04 |
| 25 | GO:0008728: GTP diphosphokinase activity | 5.78E-04 |
| 26 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.78E-04 |
| 27 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.78E-04 |
| 28 | GO:0004766: spermidine synthase activity | 5.78E-04 |
| 29 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.78E-04 |
| 30 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 5.78E-04 |
| 31 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.78E-04 |
| 32 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.78E-04 |
| 33 | GO:0005464: UDP-xylose transmembrane transporter activity | 5.78E-04 |
| 34 | GO:0030267: glyoxylate reductase (NADP) activity | 9.39E-04 |
| 35 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 9.39E-04 |
| 36 | GO:0004049: anthranilate synthase activity | 9.39E-04 |
| 37 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 9.39E-04 |
| 38 | GO:0050734: hydroxycinnamoyltransferase activity | 9.39E-04 |
| 39 | GO:0003913: DNA photolyase activity | 9.39E-04 |
| 40 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.39E-04 |
| 41 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 9.79E-04 |
| 42 | GO:0008017: microtubule binding | 1.16E-03 |
| 43 | GO:0022890: inorganic cation transmembrane transporter activity | 1.34E-03 |
| 44 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.34E-03 |
| 45 | GO:0009882: blue light photoreceptor activity | 1.34E-03 |
| 46 | GO:0048027: mRNA 5'-UTR binding | 1.34E-03 |
| 47 | GO:0042802: identical protein binding | 1.56E-03 |
| 48 | GO:0016491: oxidoreductase activity | 1.90E-03 |
| 49 | GO:0003777: microtubule motor activity | 2.10E-03 |
| 50 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 2.29E-03 |
| 51 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.37E-03 |
| 52 | GO:0035673: oligopeptide transmembrane transporter activity | 2.82E-03 |
| 53 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.82E-03 |
| 54 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.82E-03 |
| 55 | GO:0009927: histidine phosphotransfer kinase activity | 3.40E-03 |
| 56 | GO:0004602: glutathione peroxidase activity | 3.40E-03 |
| 57 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.40E-03 |
| 58 | GO:0051753: mannan synthase activity | 3.40E-03 |
| 59 | GO:0005506: iron ion binding | 3.42E-03 |
| 60 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.68E-03 |
| 61 | GO:0019899: enzyme binding | 4.00E-03 |
| 62 | GO:0019825: oxygen binding | 6.27E-03 |
| 63 | GO:0016844: strictosidine synthase activity | 6.77E-03 |
| 64 | GO:0000149: SNARE binding | 7.47E-03 |
| 65 | GO:0008515: sucrose transmembrane transporter activity | 8.35E-03 |
| 66 | GO:0015386: potassium:proton antiporter activity | 8.35E-03 |
| 67 | GO:0020037: heme binding | 8.61E-03 |
| 68 | GO:0005484: SNAP receptor activity | 8.82E-03 |
| 69 | GO:0004185: serine-type carboxypeptidase activity | 8.82E-03 |
| 70 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 9.17E-03 |
| 71 | GO:0015198: oligopeptide transporter activity | 9.17E-03 |
| 72 | GO:0010329: auxin efflux transmembrane transporter activity | 1.00E-02 |
| 73 | GO:0008081: phosphoric diester hydrolase activity | 1.00E-02 |
| 74 | GO:0031072: heat shock protein binding | 1.00E-02 |
| 75 | GO:0000155: phosphorelay sensor kinase activity | 1.00E-02 |
| 76 | GO:0004565: beta-galactosidase activity | 1.00E-02 |
| 77 | GO:0016887: ATPase activity | 1.03E-02 |
| 78 | GO:0051287: NAD binding | 1.07E-02 |
| 79 | GO:0003774: motor activity | 1.09E-02 |
| 80 | GO:0008146: sulfotransferase activity | 1.18E-02 |
| 81 | GO:0051119: sugar transmembrane transporter activity | 1.18E-02 |
| 82 | GO:0015079: potassium ion transmembrane transporter activity | 1.48E-02 |
| 83 | GO:0030570: pectate lyase activity | 1.79E-02 |
| 84 | GO:0008080: N-acetyltransferase activity | 2.24E-02 |
| 85 | GO:0010181: FMN binding | 2.36E-02 |
| 86 | GO:0015299: solute:proton antiporter activity | 2.36E-02 |
| 87 | GO:0005355: glucose transmembrane transporter activity | 2.36E-02 |
| 88 | GO:0016791: phosphatase activity | 2.99E-02 |
| 89 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 3.12E-02 |
| 90 | GO:0016597: amino acid binding | 3.25E-02 |
| 91 | GO:0016413: O-acetyltransferase activity | 3.25E-02 |
| 92 | GO:0050897: cobalt ion binding | 4.53E-02 |
| 93 | GO:0003993: acid phosphatase activity | 4.99E-02 |