GO Enrichment Analysis of Co-expressed Genes with
AT3G10200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 2 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 3 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 6 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 7 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 8 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 9 | GO:0006364: rRNA processing | 5.75E-06 |
| 10 | GO:1900864: mitochondrial RNA modification | 2.25E-05 |
| 11 | GO:0042793: transcription from plastid promoter | 5.43E-05 |
| 12 | GO:0006401: RNA catabolic process | 1.01E-04 |
| 13 | GO:0009658: chloroplast organization | 1.29E-04 |
| 14 | GO:0042255: ribosome assembly | 1.30E-04 |
| 15 | GO:0046620: regulation of organ growth | 1.30E-04 |
| 16 | GO:0006353: DNA-templated transcription, termination | 1.30E-04 |
| 17 | GO:0006999: nuclear pore organization | 1.71E-04 |
| 18 | GO:1903866: palisade mesophyll development | 1.71E-04 |
| 19 | GO:0036228: protein targeting to nuclear inner membrane | 1.71E-04 |
| 20 | GO:0033206: meiotic cytokinesis | 1.71E-04 |
| 21 | GO:0016441: posttranscriptional gene silencing | 2.80E-04 |
| 22 | GO:0009733: response to auxin | 3.36E-04 |
| 23 | GO:1901529: positive regulation of anion channel activity | 3.87E-04 |
| 24 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.87E-04 |
| 25 | GO:2000071: regulation of defense response by callose deposition | 3.87E-04 |
| 26 | GO:0080009: mRNA methylation | 3.87E-04 |
| 27 | GO:0040008: regulation of growth | 3.98E-04 |
| 28 | GO:1904278: positive regulation of wax biosynthetic process | 6.32E-04 |
| 29 | GO:0090391: granum assembly | 6.32E-04 |
| 30 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 6.32E-04 |
| 31 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.04E-04 |
| 32 | GO:0009152: purine ribonucleotide biosynthetic process | 9.04E-04 |
| 33 | GO:0008033: tRNA processing | 1.19E-03 |
| 34 | GO:0010501: RNA secondary structure unwinding | 1.19E-03 |
| 35 | GO:0006808: regulation of nitrogen utilization | 1.20E-03 |
| 36 | GO:0016120: carotene biosynthetic process | 1.52E-03 |
| 37 | GO:0016131: brassinosteroid metabolic process | 1.52E-03 |
| 38 | GO:0016123: xanthophyll biosynthetic process | 1.52E-03 |
| 39 | GO:0080156: mitochondrial mRNA modification | 1.57E-03 |
| 40 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.87E-03 |
| 41 | GO:0003006: developmental process involved in reproduction | 1.87E-03 |
| 42 | GO:0009643: photosynthetic acclimation | 1.87E-03 |
| 43 | GO:0006397: mRNA processing | 2.21E-03 |
| 44 | GO:2000033: regulation of seed dormancy process | 2.24E-03 |
| 45 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.24E-03 |
| 46 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.24E-03 |
| 47 | GO:0010098: suspensor development | 2.64E-03 |
| 48 | GO:0010374: stomatal complex development | 2.64E-03 |
| 49 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.06E-03 |
| 50 | GO:0009642: response to light intensity | 3.06E-03 |
| 51 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 3.06E-03 |
| 52 | GO:0006402: mRNA catabolic process | 3.06E-03 |
| 53 | GO:0032508: DNA duplex unwinding | 3.06E-03 |
| 54 | GO:0009734: auxin-activated signaling pathway | 3.49E-03 |
| 55 | GO:0009827: plant-type cell wall modification | 3.50E-03 |
| 56 | GO:0010233: phloem transport | 3.50E-03 |
| 57 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.50E-03 |
| 58 | GO:0010052: guard cell differentiation | 3.50E-03 |
| 59 | GO:0032544: plastid translation | 3.50E-03 |
| 60 | GO:0007389: pattern specification process | 3.50E-03 |
| 61 | GO:0009867: jasmonic acid mediated signaling pathway | 3.71E-03 |
| 62 | GO:0048507: meristem development | 3.95E-03 |
| 63 | GO:0000373: Group II intron splicing | 3.95E-03 |
| 64 | GO:0048589: developmental growth | 3.95E-03 |
| 65 | GO:0006607: NLS-bearing protein import into nucleus | 3.95E-03 |
| 66 | GO:0031425: chloroplast RNA processing | 4.44E-03 |
| 67 | GO:0006535: cysteine biosynthetic process from serine | 4.93E-03 |
| 68 | GO:0006949: syncytium formation | 4.93E-03 |
| 69 | GO:0006259: DNA metabolic process | 4.93E-03 |
| 70 | GO:0009682: induced systemic resistance | 5.45E-03 |
| 71 | GO:0006265: DNA topological change | 5.45E-03 |
| 72 | GO:0009750: response to fructose | 5.45E-03 |
| 73 | GO:0048765: root hair cell differentiation | 5.45E-03 |
| 74 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.98E-03 |
| 75 | GO:0010582: floral meristem determinacy | 5.98E-03 |
| 76 | GO:0010152: pollen maturation | 5.98E-03 |
| 77 | GO:0010588: cotyledon vascular tissue pattern formation | 6.54E-03 |
| 78 | GO:0010102: lateral root morphogenesis | 6.54E-03 |
| 79 | GO:0010020: chloroplast fission | 7.11E-03 |
| 80 | GO:0006270: DNA replication initiation | 7.11E-03 |
| 81 | GO:0048467: gynoecium development | 7.11E-03 |
| 82 | GO:0006417: regulation of translation | 7.12E-03 |
| 83 | GO:0080188: RNA-directed DNA methylation | 7.69E-03 |
| 84 | GO:0048367: shoot system development | 7.86E-03 |
| 85 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.30E-03 |
| 86 | GO:0009740: gibberellic acid mediated signaling pathway | 8.63E-03 |
| 87 | GO:0009863: salicylic acid mediated signaling pathway | 8.92E-03 |
| 88 | GO:0010187: negative regulation of seed germination | 8.92E-03 |
| 89 | GO:2000377: regulation of reactive oxygen species metabolic process | 8.92E-03 |
| 90 | GO:0019344: cysteine biosynthetic process | 8.92E-03 |
| 91 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.09E-02 |
| 92 | GO:0030245: cellulose catabolic process | 1.09E-02 |
| 93 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.16E-02 |
| 94 | GO:0009058: biosynthetic process | 1.21E-02 |
| 95 | GO:0048443: stamen development | 1.23E-02 |
| 96 | GO:0051028: mRNA transport | 1.30E-02 |
| 97 | GO:0042335: cuticle development | 1.37E-02 |
| 98 | GO:0080022: primary root development | 1.37E-02 |
| 99 | GO:0010087: phloem or xylem histogenesis | 1.37E-02 |
| 100 | GO:0010118: stomatal movement | 1.37E-02 |
| 101 | GO:0010305: leaf vascular tissue pattern formation | 1.45E-02 |
| 102 | GO:0009741: response to brassinosteroid | 1.45E-02 |
| 103 | GO:0010268: brassinosteroid homeostasis | 1.45E-02 |
| 104 | GO:0007059: chromosome segregation | 1.52E-02 |
| 105 | GO:0009749: response to glucose | 1.60E-02 |
| 106 | GO:0008654: phospholipid biosynthetic process | 1.60E-02 |
| 107 | GO:0002229: defense response to oomycetes | 1.68E-02 |
| 108 | GO:0009793: embryo development ending in seed dormancy | 1.69E-02 |
| 109 | GO:0010583: response to cyclopentenone | 1.76E-02 |
| 110 | GO:0031047: gene silencing by RNA | 1.76E-02 |
| 111 | GO:0032502: developmental process | 1.76E-02 |
| 112 | GO:0009739: response to gibberellin | 1.78E-02 |
| 113 | GO:0008380: RNA splicing | 1.90E-02 |
| 114 | GO:0006464: cellular protein modification process | 1.93E-02 |
| 115 | GO:0009828: plant-type cell wall loosening | 1.93E-02 |
| 116 | GO:0010027: thylakoid membrane organization | 2.18E-02 |
| 117 | GO:0010029: regulation of seed germination | 2.27E-02 |
| 118 | GO:0009627: systemic acquired resistance | 2.36E-02 |
| 119 | GO:0015995: chlorophyll biosynthetic process | 2.45E-02 |
| 120 | GO:0016311: dephosphorylation | 2.55E-02 |
| 121 | GO:0006811: ion transport | 2.83E-02 |
| 122 | GO:0010218: response to far red light | 2.83E-02 |
| 123 | GO:0000724: double-strand break repair via homologous recombination | 3.02E-02 |
| 124 | GO:0080167: response to karrikin | 3.05E-02 |
| 125 | GO:0030001: metal ion transport | 3.43E-02 |
| 126 | GO:0015979: photosynthesis | 3.48E-02 |
| 127 | GO:0009926: auxin polar transport | 3.74E-02 |
| 128 | GO:0009744: response to sucrose | 3.74E-02 |
| 129 | GO:0031347: regulation of defense response | 4.29E-02 |
| 130 | GO:0006260: DNA replication | 4.29E-02 |
| 131 | GO:0009664: plant-type cell wall organization | 4.40E-02 |
| 132 | GO:0009846: pollen germination | 4.40E-02 |
| 133 | GO:0042538: hyperosmotic salinity response | 4.40E-02 |
| 134 | GO:0006629: lipid metabolic process | 4.49E-02 |
| 135 | GO:0048364: root development | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 2 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 3 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 4 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 5 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 6 | GO:0003723: RNA binding | 1.66E-06 |
| 7 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.71E-04 |
| 8 | GO:0008395: steroid hydroxylase activity | 1.71E-04 |
| 9 | GO:0034335: DNA supercoiling activity | 1.71E-04 |
| 10 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.71E-04 |
| 11 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 1.71E-04 |
| 12 | GO:0004016: adenylate cyclase activity | 1.71E-04 |
| 13 | GO:0019843: rRNA binding | 2.55E-04 |
| 14 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 3.87E-04 |
| 15 | GO:0042389: omega-3 fatty acid desaturase activity | 3.87E-04 |
| 16 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 3.87E-04 |
| 17 | GO:0000175: 3'-5'-exoribonuclease activity | 4.24E-04 |
| 18 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.32E-04 |
| 19 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.32E-04 |
| 20 | GO:0003690: double-stranded DNA binding | 8.97E-04 |
| 21 | GO:0003916: DNA topoisomerase activity | 9.04E-04 |
| 22 | GO:0003727: single-stranded RNA binding | 1.02E-03 |
| 23 | GO:0010011: auxin binding | 1.20E-03 |
| 24 | GO:0008026: ATP-dependent helicase activity | 1.43E-03 |
| 25 | GO:0000293: ferric-chelate reductase activity | 1.87E-03 |
| 26 | GO:0009378: four-way junction helicase activity | 1.87E-03 |
| 27 | GO:0003688: DNA replication origin binding | 1.87E-03 |
| 28 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.87E-03 |
| 29 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 1.87E-03 |
| 30 | GO:0043138: 3'-5' DNA helicase activity | 2.24E-03 |
| 31 | GO:0004124: cysteine synthase activity | 2.24E-03 |
| 32 | GO:0004519: endonuclease activity | 2.36E-03 |
| 33 | GO:0004004: ATP-dependent RNA helicase activity | 2.65E-03 |
| 34 | GO:0017056: structural constituent of nuclear pore | 3.06E-03 |
| 35 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.50E-03 |
| 36 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.50E-03 |
| 37 | GO:0003724: RNA helicase activity | 3.50E-03 |
| 38 | GO:0003993: acid phosphatase activity | 3.88E-03 |
| 39 | GO:0000989: transcription factor activity, transcription factor binding | 3.95E-03 |
| 40 | GO:0005487: nucleocytoplasmic transporter activity | 4.44E-03 |
| 41 | GO:0016874: ligase activity | 8.63E-03 |
| 42 | GO:0004540: ribonuclease activity | 1.02E-02 |
| 43 | GO:0030570: pectate lyase activity | 1.16E-02 |
| 44 | GO:0008810: cellulase activity | 1.16E-02 |
| 45 | GO:0010181: FMN binding | 1.52E-02 |
| 46 | GO:0019901: protein kinase binding | 1.60E-02 |
| 47 | GO:0048038: quinone binding | 1.68E-02 |
| 48 | GO:0043565: sequence-specific DNA binding | 2.49E-02 |
| 49 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.83E-02 |
| 50 | GO:0003697: single-stranded DNA binding | 3.12E-02 |
| 51 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.33E-02 |
| 52 | GO:0043621: protein self-association | 3.96E-02 |
| 53 | GO:0004722: protein serine/threonine phosphatase activity | 4.00E-02 |
| 54 | GO:0003676: nucleic acid binding | 4.41E-02 |
| 55 | GO:0016298: lipase activity | 4.74E-02 |