GO Enrichment Analysis of Co-expressed Genes with
AT3G10060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 1.12E-09 |
| 4 | GO:0009735: response to cytokinin | 1.52E-06 |
| 5 | GO:0009658: chloroplast organization | 3.59E-06 |
| 6 | GO:0015979: photosynthesis | 1.11E-05 |
| 7 | GO:0010600: regulation of auxin biosynthetic process | 3.72E-05 |
| 8 | GO:0010021: amylopectin biosynthetic process | 3.72E-05 |
| 9 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.21E-04 |
| 10 | GO:0010928: regulation of auxin mediated signaling pathway | 2.03E-04 |
| 11 | GO:0034337: RNA folding | 2.29E-04 |
| 12 | GO:0043953: protein transport by the Tat complex | 2.29E-04 |
| 13 | GO:0065002: intracellular protein transmembrane transport | 2.29E-04 |
| 14 | GO:0032544: plastid translation | 2.51E-04 |
| 15 | GO:0006783: heme biosynthetic process | 3.04E-04 |
| 16 | GO:0009773: photosynthetic electron transport in photosystem I | 4.90E-04 |
| 17 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.90E-04 |
| 18 | GO:0006412: translation | 4.99E-04 |
| 19 | GO:0008616: queuosine biosynthetic process | 5.10E-04 |
| 20 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.10E-04 |
| 21 | GO:0006094: gluconeogenesis | 6.36E-04 |
| 22 | GO:0005977: glycogen metabolic process | 8.29E-04 |
| 23 | GO:0006000: fructose metabolic process | 8.29E-04 |
| 24 | GO:0006518: peptide metabolic process | 8.29E-04 |
| 25 | GO:0044375: regulation of peroxisome size | 8.29E-04 |
| 26 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.08E-03 |
| 27 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.18E-03 |
| 28 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.18E-03 |
| 29 | GO:0009152: purine ribonucleotide biosynthetic process | 1.18E-03 |
| 30 | GO:0046653: tetrahydrofolate metabolic process | 1.18E-03 |
| 31 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.18E-03 |
| 32 | GO:0033014: tetrapyrrole biosynthetic process | 1.18E-03 |
| 33 | GO:0010731: protein glutathionylation | 1.18E-03 |
| 34 | GO:1901332: negative regulation of lateral root development | 1.18E-03 |
| 35 | GO:0006986: response to unfolded protein | 1.18E-03 |
| 36 | GO:0045727: positive regulation of translation | 1.57E-03 |
| 37 | GO:0042631: cellular response to water deprivation | 1.78E-03 |
| 38 | GO:0009107: lipoate biosynthetic process | 2.01E-03 |
| 39 | GO:0043097: pyrimidine nucleoside salvage | 2.01E-03 |
| 40 | GO:0000304: response to singlet oxygen | 2.01E-03 |
| 41 | GO:0019252: starch biosynthetic process | 2.21E-03 |
| 42 | GO:0006206: pyrimidine nucleobase metabolic process | 2.48E-03 |
| 43 | GO:1901259: chloroplast rRNA processing | 2.97E-03 |
| 44 | GO:0000054: ribosomal subunit export from nucleus | 2.97E-03 |
| 45 | GO:0009854: oxidative photosynthetic carbon pathway | 2.97E-03 |
| 46 | GO:0010027: thylakoid membrane organization | 3.41E-03 |
| 47 | GO:0010161: red light signaling pathway | 3.50E-03 |
| 48 | GO:1900057: positive regulation of leaf senescence | 3.50E-03 |
| 49 | GO:0009645: response to low light intensity stimulus | 3.50E-03 |
| 50 | GO:0032259: methylation | 3.67E-03 |
| 51 | GO:0006633: fatty acid biosynthetic process | 4.00E-03 |
| 52 | GO:0016559: peroxisome fission | 4.06E-03 |
| 53 | GO:0048564: photosystem I assembly | 4.06E-03 |
| 54 | GO:0005978: glycogen biosynthetic process | 4.06E-03 |
| 55 | GO:0042255: ribosome assembly | 4.06E-03 |
| 56 | GO:0006353: DNA-templated transcription, termination | 4.06E-03 |
| 57 | GO:0009704: de-etiolation | 4.06E-03 |
| 58 | GO:0009817: defense response to fungus, incompatible interaction | 4.44E-03 |
| 59 | GO:0018298: protein-chromophore linkage | 4.44E-03 |
| 60 | GO:0006002: fructose 6-phosphate metabolic process | 4.65E-03 |
| 61 | GO:0071482: cellular response to light stimulus | 4.65E-03 |
| 62 | GO:0009657: plastid organization | 4.65E-03 |
| 63 | GO:0006526: arginine biosynthetic process | 4.65E-03 |
| 64 | GO:0006810: transport | 5.09E-03 |
| 65 | GO:0009853: photorespiration | 5.62E-03 |
| 66 | GO:0005982: starch metabolic process | 5.91E-03 |
| 67 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.91E-03 |
| 68 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.58E-03 |
| 69 | GO:0010114: response to red light | 7.25E-03 |
| 70 | GO:0006415: translational termination | 7.28E-03 |
| 71 | GO:0000272: polysaccharide catabolic process | 7.28E-03 |
| 72 | GO:0009750: response to fructose | 7.28E-03 |
| 73 | GO:0005983: starch catabolic process | 8.00E-03 |
| 74 | GO:0042254: ribosome biogenesis | 8.05E-03 |
| 75 | GO:0018107: peptidyl-threonine phosphorylation | 8.75E-03 |
| 76 | GO:0009767: photosynthetic electron transport chain | 8.75E-03 |
| 77 | GO:0005986: sucrose biosynthetic process | 8.75E-03 |
| 78 | GO:0009266: response to temperature stimulus | 9.52E-03 |
| 79 | GO:0019253: reductive pentose-phosphate cycle | 9.52E-03 |
| 80 | GO:0006364: rRNA processing | 9.78E-03 |
| 81 | GO:0009585: red, far-red light phototransduction | 9.78E-03 |
| 82 | GO:0007031: peroxisome organization | 1.03E-02 |
| 83 | GO:0019762: glucosinolate catabolic process | 1.11E-02 |
| 84 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.11E-02 |
| 85 | GO:0000027: ribosomal large subunit assembly | 1.20E-02 |
| 86 | GO:0007017: microtubule-based process | 1.28E-02 |
| 87 | GO:0031408: oxylipin biosynthetic process | 1.37E-02 |
| 88 | GO:0019748: secondary metabolic process | 1.46E-02 |
| 89 | GO:0010017: red or far-red light signaling pathway | 1.46E-02 |
| 90 | GO:0035428: hexose transmembrane transport | 1.46E-02 |
| 91 | GO:0016226: iron-sulfur cluster assembly | 1.46E-02 |
| 92 | GO:0009693: ethylene biosynthetic process | 1.56E-02 |
| 93 | GO:0009625: response to insect | 1.56E-02 |
| 94 | GO:0009561: megagametogenesis | 1.65E-02 |
| 95 | GO:0009306: protein secretion | 1.65E-02 |
| 96 | GO:0006606: protein import into nucleus | 1.85E-02 |
| 97 | GO:0000413: protein peptidyl-prolyl isomerization | 1.85E-02 |
| 98 | GO:0009058: biosynthetic process | 1.85E-02 |
| 99 | GO:0046323: glucose import | 1.95E-02 |
| 100 | GO:0006520: cellular amino acid metabolic process | 1.95E-02 |
| 101 | GO:0000302: response to reactive oxygen species | 2.27E-02 |
| 102 | GO:0032502: developmental process | 2.37E-02 |
| 103 | GO:0009567: double fertilization forming a zygote and endosperm | 2.60E-02 |
| 104 | GO:0010411: xyloglucan metabolic process | 3.31E-02 |
| 105 | GO:0006950: response to stress | 3.31E-02 |
| 106 | GO:0016311: dephosphorylation | 3.43E-02 |
| 107 | GO:0010311: lateral root formation | 3.68E-02 |
| 108 | GO:0055114: oxidation-reduction process | 3.81E-02 |
| 109 | GO:0010218: response to far red light | 3.81E-02 |
| 110 | GO:0009409: response to cold | 4.19E-02 |
| 111 | GO:0009637: response to blue light | 4.21E-02 |
| 112 | GO:0034599: cellular response to oxidative stress | 4.34E-02 |
| 113 | GO:0030001: metal ion transport | 4.62E-02 |
| 114 | GO:0006457: protein folding | 4.77E-02 |
| 115 | GO:0005975: carbohydrate metabolic process | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 6 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 8 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 1.50E-11 |
| 10 | GO:0003735: structural constituent of ribosome | 1.44E-05 |
| 11 | GO:0016851: magnesium chelatase activity | 2.04E-05 |
| 12 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.29E-04 |
| 13 | GO:0004325: ferrochelatase activity | 2.29E-04 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.29E-04 |
| 15 | GO:0005080: protein kinase C binding | 2.29E-04 |
| 16 | GO:0010297: heteropolysaccharide binding | 5.10E-04 |
| 17 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.10E-04 |
| 18 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.10E-04 |
| 19 | GO:0008479: queuine tRNA-ribosyltransferase activity | 5.10E-04 |
| 20 | GO:0043024: ribosomal small subunit binding | 5.10E-04 |
| 21 | GO:0018708: thiol S-methyltransferase activity | 5.10E-04 |
| 22 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 5.10E-04 |
| 23 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.10E-04 |
| 24 | GO:0019172: glyoxalase III activity | 5.10E-04 |
| 25 | GO:0019156: isoamylase activity | 5.10E-04 |
| 26 | GO:0042389: omega-3 fatty acid desaturase activity | 5.10E-04 |
| 27 | GO:0031072: heat shock protein binding | 6.36E-04 |
| 28 | GO:0008266: poly(U) RNA binding | 7.15E-04 |
| 29 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.29E-04 |
| 30 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 8.29E-04 |
| 31 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 8.29E-04 |
| 32 | GO:0043169: cation binding | 8.29E-04 |
| 33 | GO:0016992: lipoate synthase activity | 8.29E-04 |
| 34 | GO:0004751: ribose-5-phosphate isomerase activity | 8.29E-04 |
| 35 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.29E-04 |
| 36 | GO:0031409: pigment binding | 8.89E-04 |
| 37 | GO:0008168: methyltransferase activity | 1.47E-03 |
| 38 | GO:0003727: single-stranded RNA binding | 1.52E-03 |
| 39 | GO:0005319: lipid transporter activity | 1.57E-03 |
| 40 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.57E-03 |
| 41 | GO:0051082: unfolded protein binding | 2.25E-03 |
| 42 | GO:0004332: fructose-bisphosphate aldolase activity | 2.48E-03 |
| 43 | GO:0004130: cytochrome-c peroxidase activity | 2.48E-03 |
| 44 | GO:0004556: alpha-amylase activity | 2.48E-03 |
| 45 | GO:0004462: lactoylglutathione lyase activity | 2.48E-03 |
| 46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.97E-03 |
| 47 | GO:0004849: uridine kinase activity | 2.97E-03 |
| 48 | GO:0016831: carboxy-lyase activity | 3.50E-03 |
| 49 | GO:0016168: chlorophyll binding | 3.60E-03 |
| 50 | GO:0004033: aldo-keto reductase (NADP) activity | 4.06E-03 |
| 51 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.65E-03 |
| 52 | GO:0004222: metalloendopeptidase activity | 4.89E-03 |
| 53 | GO:0071949: FAD binding | 5.27E-03 |
| 54 | GO:0003746: translation elongation factor activity | 5.62E-03 |
| 55 | GO:0016887: ATPase activity | 7.63E-03 |
| 56 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.84E-03 |
| 57 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.46E-03 |
| 58 | GO:0004565: beta-galactosidase activity | 8.75E-03 |
| 59 | GO:0051287: NAD binding | 8.78E-03 |
| 60 | GO:0051536: iron-sulfur cluster binding | 1.20E-02 |
| 61 | GO:0051087: chaperone binding | 1.28E-02 |
| 62 | GO:0016491: oxidoreductase activity | 1.32E-02 |
| 63 | GO:0005355: glucose transmembrane transporter activity | 2.05E-02 |
| 64 | GO:0050662: coenzyme binding | 2.05E-02 |
| 65 | GO:0008565: protein transporter activity | 2.10E-02 |
| 66 | GO:0048038: quinone binding | 2.27E-02 |
| 67 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.27E-02 |
| 68 | GO:0005200: structural constituent of cytoskeleton | 2.71E-02 |
| 69 | GO:0016787: hydrolase activity | 3.02E-02 |
| 70 | GO:0042802: identical protein binding | 3.07E-02 |
| 71 | GO:0003824: catalytic activity | 3.09E-02 |
| 72 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.31E-02 |
| 73 | GO:0004601: peroxidase activity | 3.74E-02 |
| 74 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.62E-02 |
| 75 | GO:0004364: glutathione transferase activity | 4.90E-02 |