co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:0010647: positive regulation of cell communication	0.00E+00
5	GO:1902001: fatty acid transmembrane transport	0.00E+00
6	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
7	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
8	GO:1900367: positive regulation of defense response to insect	0.00E+00
9	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
10	GO:0002764: immune response-regulating signaling pathway	0.00E+00
11	GO:0006983: ER overload response	0.00E+00
12	GO:1902009: positive regulation of toxin transport	0.00E+00
13	GO:0006468: protein phosphorylation	1.09E-08
14	GO:0010200: response to chitin	3.39E-07
15	GO:0060548: negative regulation of cell death	1.35E-06
16	GO:0009617: response to bacterium	4.59E-06
17	GO:0019725: cellular homeostasis	9.42E-06
18	GO:0031348: negative regulation of defense response	2.79E-05
19	GO:0010112: regulation of systemic acquired resistance	4.43E-05
20	GO:0015696: ammonium transport	6.96E-05
21	GO:0080142: regulation of salicylic acid biosynthetic process	1.22E-04
22	GO:0072488: ammonium transmembrane transport	1.22E-04
23	GO:0010225: response to UV-C	1.87E-04
24	GO:0007166: cell surface receptor signaling pathway	2.32E-04
25	GO:0009626: plant-type hypersensitive response	2.54E-04
26	GO:0009751: response to salicylic acid	3.81E-04
27	GO:1900056: negative regulation of leaf senescence	4.58E-04
28	GO:0042350: GDP-L-fucose biosynthetic process	4.62E-04
29	GO:0019567: arabinose biosynthetic process	4.62E-04
30	GO:0015969: guanosine tetraphosphate metabolic process	4.62E-04
31	GO:0009609: response to symbiotic bacterium	4.62E-04
32	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.62E-04
33	GO:0051180: vitamin transport	4.62E-04
34	GO:0010482: regulation of epidermal cell division	4.62E-04
35	GO:0030974: thiamine pyrophosphate transport	4.62E-04
36	GO:1901183: positive regulation of camalexin biosynthetic process	4.62E-04
37	GO:0009270: response to humidity	4.62E-04
38	GO:0006643: membrane lipid metabolic process	4.62E-04
39	GO:0032469: endoplasmic reticulum calcium ion homeostasis	4.62E-04
40	GO:0035556: intracellular signal transduction	4.76E-04
41	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.96E-04
42	GO:0009737: response to abscisic acid	8.07E-04
43	GO:1900426: positive regulation of defense response to bacterium	9.81E-04
44	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	9.81E-04
45	GO:0071668: plant-type cell wall assembly	9.96E-04
46	GO:0002221: pattern recognition receptor signaling pathway	9.96E-04
47	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.96E-04
48	GO:0009838: abscission	9.96E-04
49	GO:0080185: effector dependent induction by symbiont of host immune response	9.96E-04
50	GO:0010618: aerenchyma formation	9.96E-04
51	GO:0080181: lateral root branching	9.96E-04
52	GO:0055088: lipid homeostasis	9.96E-04
53	GO:0000719: photoreactive repair	9.96E-04
54	GO:0015908: fatty acid transport	9.96E-04
55	GO:0043066: negative regulation of apoptotic process	9.96E-04
56	GO:0044419: interspecies interaction between organisms	9.96E-04
57	GO:0031349: positive regulation of defense response	9.96E-04
58	GO:0015893: drug transport	9.96E-04
59	GO:0051258: protein polymerization	9.96E-04
60	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.96E-04
61	GO:0006952: defense response	1.16E-03
62	GO:0001666: response to hypoxia	1.39E-03
63	GO:0009620: response to fungus	1.47E-03
64	GO:0009816: defense response to bacterium, incompatible interaction	1.49E-03
65	GO:0012501: programmed cell death	1.51E-03
66	GO:0044375: regulation of peroxisome size	1.62E-03
67	GO:0045793: positive regulation of cell size	1.62E-03
68	GO:0010186: positive regulation of cellular defense response	1.62E-03
69	GO:0015695: organic cation transport	1.62E-03
70	GO:0009653: anatomical structure morphogenesis	1.62E-03
71	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.62E-03
72	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.62E-03
73	GO:0016045: detection of bacterium	1.62E-03
74	GO:1900140: regulation of seedling development	1.62E-03
75	GO:0002230: positive regulation of defense response to virus by host	1.62E-03
76	GO:0010359: regulation of anion channel activity	1.62E-03
77	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.62E-03
78	GO:0018105: peptidyl-serine phosphorylation	1.76E-03
79	GO:0009266: response to temperature stimulus	1.93E-03
80	GO:0008219: cell death	1.95E-03
81	GO:0042742: defense response to bacterium	2.29E-03
82	GO:0006979: response to oxidative stress	2.33E-03
83	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.35E-03
84	GO:0046713: borate transport	2.35E-03
85	GO:0043207: response to external biotic stimulus	2.35E-03
86	GO:0072334: UDP-galactose transmembrane transport	2.35E-03
87	GO:0015749: monosaccharide transport	2.35E-03
88	GO:0030100: regulation of endocytosis	2.35E-03
89	GO:0009226: nucleotide-sugar biosynthetic process	2.35E-03
90	GO:0072583: clathrin-dependent endocytosis	2.35E-03
91	GO:0048530: fruit morphogenesis	2.35E-03
92	GO:0002679: respiratory burst involved in defense response	2.35E-03
93	GO:1902290: positive regulation of defense response to oomycetes	2.35E-03
94	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.90E-03
95	GO:0016192: vesicle-mediated transport	2.98E-03
96	GO:0045227: capsule polysaccharide biosynthetic process	3.16E-03
97	GO:0046345: abscisic acid catabolic process	3.16E-03
98	GO:0033358: UDP-L-arabinose biosynthetic process	3.16E-03
99	GO:0051567: histone H3-K9 methylation	3.16E-03
100	GO:0006897: endocytosis	3.29E-03
101	GO:0071456: cellular response to hypoxia	3.56E-03
102	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.56E-03
103	GO:0010150: leaf senescence	3.89E-03
104	GO:0006886: intracellular protein transport	3.96E-03
105	GO:0034052: positive regulation of plant-type hypersensitive response	4.05E-03
106	GO:0031347: regulation of defense response	4.67E-03
107	GO:0006470: protein dephosphorylation	4.78E-03
108	GO:0009759: indole glucosinolate biosynthetic process	5.02E-03
109	GO:0010942: positive regulation of cell death	5.02E-03
110	GO:1900425: negative regulation of defense response to bacterium	5.02E-03
111	GO:0006574: valine catabolic process	5.02E-03
112	GO:0010555: response to mannitol	6.06E-03
113	GO:0010310: regulation of hydrogen peroxide metabolic process	6.06E-03
114	GO:2000067: regulation of root morphogenesis	6.06E-03
115	GO:0045926: negative regulation of growth	6.06E-03
116	GO:0009094: L-phenylalanine biosynthetic process	6.06E-03
117	GO:0031930: mitochondria-nucleus signaling pathway	6.06E-03
118	GO:0048509: regulation of meristem development	6.06E-03
119	GO:0010199: organ boundary specification between lateral organs and the meristem	6.06E-03
120	GO:0009749: response to glucose	6.17E-03
121	GO:1902074: response to salt	7.16E-03
122	GO:0010044: response to aluminum ion	7.16E-03
123	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	7.16E-03
124	GO:0009610: response to symbiotic fungus	7.16E-03
125	GO:0046470: phosphatidylcholine metabolic process	7.16E-03
126	GO:0043090: amino acid import	7.16E-03
127	GO:0071446: cellular response to salicylic acid stimulus	7.16E-03
128	GO:1900057: positive regulation of leaf senescence	7.16E-03
129	GO:0016559: peroxisome fission	8.33E-03
130	GO:0035265: organ growth	8.33E-03
131	GO:0009787: regulation of abscisic acid-activated signaling pathway	8.33E-03
132	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.33E-03
133	GO:0009819: drought recovery	8.33E-03
134	GO:0030162: regulation of proteolysis	8.33E-03
135	GO:1900150: regulation of defense response to fungus	8.33E-03
136	GO:0006904: vesicle docking involved in exocytosis	8.53E-03
137	GO:0009742: brassinosteroid mediated signaling pathway	9.05E-03
138	GO:0010208: pollen wall assembly	9.57E-03
139	GO:0007186: G-protein coupled receptor signaling pathway	9.57E-03
140	GO:0010497: plasmodesmata-mediated intercellular transport	9.57E-03
141	GO:0010120: camalexin biosynthetic process	9.57E-03
142	GO:0010204: defense response signaling pathway, resistance gene-independent	9.57E-03
143	GO:0080167: response to karrikin	1.05E-02
144	GO:0009627: systemic acquired resistance	1.07E-02
145	GO:0046685: response to arsenic-containing substance	1.09E-02
146	GO:0006098: pentose-phosphate shunt	1.09E-02
147	GO:0009821: alkaloid biosynthetic process	1.09E-02
148	GO:0051865: protein autoubiquitination	1.09E-02
149	GO:0046916: cellular transition metal ion homeostasis	1.09E-02
150	GO:0015031: protein transport	1.10E-02
151	GO:0046777: protein autophosphorylation	1.16E-02
152	GO:0016049: cell growth	1.19E-02
153	GO:0007165: signal transduction	1.28E-02
154	GO:0043069: negative regulation of programmed cell death	1.37E-02
155	GO:0006032: chitin catabolic process	1.37E-02
156	GO:0007568: aging	1.45E-02
157	GO:0009750: response to fructose	1.51E-02
158	GO:0048765: root hair cell differentiation	1.51E-02
159	GO:0000038: very long-chain fatty acid metabolic process	1.51E-02
160	GO:0043085: positive regulation of catalytic activity	1.51E-02
161	GO:0008361: regulation of cell size	1.67E-02
162	GO:0002213: defense response to insect	1.67E-02
163	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.67E-02
164	GO:0018107: peptidyl-threonine phosphorylation	1.82E-02
165	GO:0055046: microgametogenesis	1.82E-02
166	GO:2000012: regulation of auxin polar transport	1.82E-02
167	GO:0002237: response to molecule of bacterial origin	1.99E-02
168	GO:0007034: vacuolar transport	1.99E-02
169	GO:0051707: response to other organism	2.06E-02
170	GO:0000209: protein polyubiquitination	2.14E-02
171	GO:0070588: calcium ion transmembrane transport	2.16E-02
172	GO:0010053: root epidermal cell differentiation	2.16E-02
173	GO:0009225: nucleotide-sugar metabolic process	2.16E-02
174	GO:0007031: peroxisome organization	2.16E-02
175	GO:0042343: indole glucosinolate metabolic process	2.16E-02
176	GO:0010167: response to nitrate	2.16E-02
177	GO:0046688: response to copper ion	2.16E-02
178	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.50E-02
179	GO:2000377: regulation of reactive oxygen species metabolic process	2.51E-02
180	GO:0009863: salicylic acid mediated signaling pathway	2.51E-02
181	GO:0080147: root hair cell development	2.51E-02
182	GO:0030150: protein import into mitochondrial matrix	2.51E-02
183	GO:0042538: hyperosmotic salinity response	2.59E-02
184	GO:0006825: copper ion transport	2.69E-02
185	GO:0051302: regulation of cell division	2.69E-02
186	GO:0010026: trichome differentiation	2.69E-02
187	GO:0009809: lignin biosynthetic process	2.78E-02
188	GO:0016998: cell wall macromolecule catabolic process	2.88E-02
189	GO:0098542: defense response to other organism	2.88E-02
190	GO:0010431: seed maturation	2.88E-02
191	GO:0030433: ubiquitin-dependent ERAD pathway	3.07E-02
192	GO:0006970: response to osmotic stress	3.21E-02
193	GO:0009625: response to insect	3.27E-02
194	GO:0006012: galactose metabolic process	3.27E-02
195	GO:0009411: response to UV	3.27E-02
196	GO:0009306: protein secretion	3.47E-02
197	GO:0006284: base-excision repair	3.47E-02
198	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.67E-02
199	GO:0046323: glucose import	4.09E-02
200	GO:0009741: response to brassinosteroid	4.09E-02
201	GO:0006662: glycerol ether metabolic process	4.09E-02
202	GO:0009414: response to water deprivation	4.60E-02
203	GO:0071554: cell wall organization or biogenesis	4.75E-02
204	GO:0002229: defense response to oomycetes	4.75E-02
205	GO:0045892: negative regulation of transcription, DNA-templated	4.85E-02
206	GO:0007264: small GTPase mediated signal transduction	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
2	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
3	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
4	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
5	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
6	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
7	GO:0008320: protein transmembrane transporter activity	2.01E-07
8	GO:0016301: kinase activity	3.19E-06
9	GO:0004672: protein kinase activity	1.68E-05
10	GO:0004674: protein serine/threonine kinase activity	1.14E-04
11	GO:0005509: calcium ion binding	1.88E-04
12	GO:0008519: ammonium transmembrane transporter activity	2.65E-04
13	GO:0005524: ATP binding	3.44E-04
14	GO:0033612: receptor serine/threonine kinase binding	3.51E-04
15	GO:0015245: fatty acid transporter activity	4.62E-04
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	4.62E-04
17	GO:0050577: GDP-L-fucose synthase activity	4.62E-04
18	GO:0009679: hexose:proton symporter activity	4.62E-04
19	GO:0032050: clathrin heavy chain binding	4.62E-04
20	GO:2001227: quercitrin binding	4.62E-04
21	GO:1901149: salicylic acid binding	4.62E-04
22	GO:0090422: thiamine pyrophosphate transporter activity	4.62E-04
23	GO:0015085: calcium ion transmembrane transporter activity	4.62E-04
24	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	4.62E-04
25	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	4.62E-04
26	GO:2001147: camalexin binding	4.62E-04
27	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.71E-04
28	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.66E-04
29	GO:0015036: disulfide oxidoreductase activity	9.96E-04
30	GO:0008728: GTP diphosphokinase activity	9.96E-04
31	GO:0004713: protein tyrosine kinase activity	1.14E-03
32	GO:0008375: acetylglucosaminyltransferase activity	1.60E-03
33	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.60E-03
34	GO:0004383: guanylate cyclase activity	1.62E-03
35	GO:0001664: G-protein coupled receptor binding	1.62E-03
36	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.62E-03
37	GO:0016531: copper chaperone activity	1.62E-03
38	GO:0031683: G-protein beta/gamma-subunit complex binding	1.62E-03
39	GO:0004683: calmodulin-dependent protein kinase activity	1.71E-03
40	GO:0004806: triglyceride lipase activity	1.71E-03
41	GO:0050373: UDP-arabinose 4-epimerase activity	3.16E-03
42	GO:0047769: arogenate dehydratase activity	3.16E-03
43	GO:0004664: prephenate dehydratase activity	3.16E-03
44	GO:0019199: transmembrane receptor protein kinase activity	3.16E-03
45	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.05E-03
46	GO:0008725: DNA-3-methyladenine glycosylase activity	4.05E-03
47	GO:0010294: abscisic acid glucosyltransferase activity	4.05E-03
48	GO:0005459: UDP-galactose transmembrane transporter activity	4.05E-03
49	GO:0015145: monosaccharide transmembrane transporter activity	4.05E-03
50	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.05E-03
51	GO:0004871: signal transducer activity	4.07E-03
52	GO:0004656: procollagen-proline 4-dioxygenase activity	6.06E-03
53	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.06E-03
54	GO:0003978: UDP-glucose 4-epimerase activity	6.06E-03
55	GO:0031625: ubiquitin protein ligase binding	6.09E-03
56	GO:0043295: glutathione binding	7.16E-03
57	GO:0005544: calcium-dependent phospholipid binding	8.33E-03
58	GO:0004869: cysteine-type endopeptidase inhibitor activity	8.33E-03
59	GO:0004630: phospholipase D activity	9.57E-03
60	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	9.57E-03
61	GO:0030247: polysaccharide binding	1.13E-02
62	GO:0016844: strictosidine synthase activity	1.22E-02
63	GO:0030234: enzyme regulator activity	1.37E-02
64	GO:0004568: chitinase activity	1.37E-02
65	GO:0008171: O-methyltransferase activity	1.37E-02
66	GO:0008047: enzyme activator activity	1.37E-02
67	GO:0005543: phospholipid binding	1.51E-02
68	GO:0004722: protein serine/threonine phosphatase activity	1.59E-02
69	GO:0015198: oligopeptide transporter activity	1.67E-02
70	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.74E-02
71	GO:0031072: heat shock protein binding	1.82E-02
72	GO:0005262: calcium channel activity	1.82E-02
73	GO:0005388: calcium-transporting ATPase activity	1.82E-02
74	GO:0005515: protein binding	2.19E-02
75	GO:0031418: L-ascorbic acid binding	2.51E-02
76	GO:0003954: NADH dehydrogenase activity	2.51E-02
77	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.88E-02
78	GO:0004707: MAP kinase activity	2.88E-02
79	GO:0005516: calmodulin binding	2.94E-02
80	GO:0004842: ubiquitin-protein transferase activity	3.35E-02
81	GO:0005525: GTP binding	3.41E-02
82	GO:0047134: protein-disulfide reductase activity	3.67E-02
83	GO:0061630: ubiquitin protein ligase activity	4.06E-02
84	GO:0016746: transferase activity, transferring acyl groups	4.07E-02
85	GO:0004791: thioredoxin-disulfide reductase activity	4.31E-02
86	GO:0016853: isomerase activity	4.31E-02
87	GO:0050662: coenzyme binding	4.31E-02
88	GO:0004197: cysteine-type endopeptidase activity	4.98E-02