co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006497: protein lipidation	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0010055: atrichoblast differentiation	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:0010401: pectic galactan metabolic process	0.00E+00
6	GO:0043132: NAD transport	3.65E-06
7	GO:0055074: calcium ion homeostasis	1.31E-05
8	GO:0009225: nucleotide-sugar metabolic process	6.92E-05
9	GO:0009814: defense response, incompatible interaction	1.47E-04
10	GO:0015031: protein transport	1.93E-04
11	GO:0032107: regulation of response to nutrient levels	2.82E-04
12	GO:0035266: meristem growth	2.82E-04
13	GO:0016337: single organismal cell-cell adhesion	2.82E-04
14	GO:0007292: female gamete generation	2.82E-04
15	GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	2.82E-04
16	GO:0009623: response to parasitic fungus	2.82E-04
17	GO:0035352: NAD transmembrane transport	2.82E-04
18	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.82E-04
19	GO:0006680: glucosylceramide catabolic process	2.82E-04
20	GO:0042539: hypotonic salinity response	2.82E-04
21	GO:0019673: GDP-mannose metabolic process	2.82E-04
22	GO:0046686: response to cadmium ion	3.47E-04
23	GO:0006914: autophagy	4.45E-04
24	GO:0090332: stomatal closure	4.86E-04
25	GO:0008202: steroid metabolic process	4.86E-04
26	GO:0009615: response to virus	5.58E-04
27	GO:0046939: nucleotide phosphorylation	6.19E-04
28	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.19E-04
29	GO:0006024: glycosaminoglycan biosynthetic process	6.19E-04
30	GO:0052541: plant-type cell wall cellulose metabolic process	6.19E-04
31	GO:0051788: response to misfolded protein	6.19E-04
32	GO:0019725: cellular homeostasis	6.19E-04
33	GO:0051252: regulation of RNA metabolic process	6.19E-04
34	GO:0015012: heparan sulfate proteoglycan biosynthetic process	6.19E-04
35	GO:0044375: regulation of peroxisome size	1.00E-03
36	GO:0045836: positive regulation of meiotic nuclear division	1.00E-03
37	GO:0010186: positive regulation of cellular defense response	1.00E-03
38	GO:0010272: response to silver ion	1.00E-03
39	GO:0060968: regulation of gene silencing	1.00E-03
40	GO:0008333: endosome to lysosome transport	1.00E-03
41	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.00E-03
42	GO:0010253: UDP-rhamnose biosynthetic process	1.00E-03
43	GO:0051176: positive regulation of sulfur metabolic process	1.00E-03
44	GO:0006886: intracellular protein transport	1.08E-03
45	GO:0032877: positive regulation of DNA endoreduplication	1.44E-03
46	GO:0000187: activation of MAPK activity	1.44E-03
47	GO:0070301: cellular response to hydrogen peroxide	1.44E-03
48	GO:0072334: UDP-galactose transmembrane transport	1.44E-03
49	GO:0015858: nucleoside transport	1.44E-03
50	GO:0016998: cell wall macromolecule catabolic process	1.58E-03
51	GO:0006468: protein phosphorylation	1.63E-03
52	GO:0010227: floral organ abscission	1.88E-03
53	GO:0060548: negative regulation of cell death	1.92E-03
54	GO:0033320: UDP-D-xylose biosynthetic process	1.92E-03
55	GO:0048638: regulation of developmental growth	1.92E-03
56	GO:0007112: male meiosis cytokinesis	1.92E-03
57	GO:1990937: xylan acetylation	1.92E-03
58	GO:0042147: retrograde transport, endosome to Golgi	2.21E-03
59	GO:0031365: N-terminal protein amino acid modification	2.46E-03
60	GO:0009435: NAD biosynthetic process	2.46E-03
61	GO:0006665: sphingolipid metabolic process	2.46E-03
62	GO:0045927: positive regulation of growth	2.46E-03
63	GO:0098719: sodium ion import across plasma membrane	2.46E-03
64	GO:0046283: anthocyanin-containing compound metabolic process	2.46E-03
65	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.46E-03
66	GO:0010183: pollen tube guidance	2.97E-03
67	GO:0048827: phyllome development	3.03E-03
68	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.03E-03
69	GO:0048232: male gamete generation	3.03E-03
70	GO:0043248: proteasome assembly	3.03E-03
71	GO:0042732: D-xylose metabolic process	3.03E-03
72	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	3.03E-03
73	GO:0060918: auxin transport	3.03E-03
74	GO:0045040: protein import into mitochondrial outer membrane	3.03E-03
75	GO:0006139: nucleobase-containing compound metabolic process	3.03E-03
76	GO:0042176: regulation of protein catabolic process	3.03E-03
77	GO:0003006: developmental process involved in reproduction	3.03E-03
78	GO:0010315: auxin efflux	3.03E-03
79	GO:0009117: nucleotide metabolic process	3.03E-03
80	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.03E-03
81	GO:0016310: phosphorylation	3.30E-03
82	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.65E-03
83	GO:0000911: cytokinesis by cell plate formation	3.65E-03
84	GO:0009567: double fertilization forming a zygote and endosperm	3.85E-03
85	GO:0009555: pollen development	4.06E-03
86	GO:0009610: response to symbiotic fungus	4.30E-03
87	GO:0080027: response to herbivore	4.30E-03
88	GO:0007050: cell cycle arrest	4.30E-03
89	GO:0015937: coenzyme A biosynthetic process	4.30E-03
90	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.30E-03
91	GO:0042742: defense response to bacterium	4.34E-03
92	GO:0045454: cell redox homeostasis	4.50E-03
93	GO:0006102: isocitrate metabolic process	4.99E-03
94	GO:0010078: maintenance of root meristem identity	4.99E-03
95	GO:0009627: systemic acquired resistance	5.12E-03
96	GO:0006972: hyperosmotic response	5.72E-03
97	GO:0010204: defense response signaling pathway, resistance gene-independent	5.72E-03
98	GO:0015780: nucleotide-sugar transport	6.48E-03
99	GO:0007338: single fertilization	6.48E-03
100	GO:0006499: N-terminal protein myristoylation	6.60E-03
101	GO:0051453: regulation of intracellular pH	7.28E-03
102	GO:0048268: clathrin coat assembly	7.28E-03
103	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.28E-03
104	GO:0007166: cell surface receptor signaling pathway	7.83E-03
105	GO:0006099: tricarboxylic acid cycle	7.94E-03
106	GO:0043069: negative regulation of programmed cell death	8.11E-03
107	GO:0048829: root cap development	8.11E-03
108	GO:0051555: flavonol biosynthetic process	8.11E-03
109	GO:0006032: chitin catabolic process	8.11E-03
110	GO:0006839: mitochondrial transport	8.65E-03
111	GO:0048229: gametophyte development	8.97E-03
112	GO:0010015: root morphogenesis	8.97E-03
113	GO:0043085: positive regulation of catalytic activity	8.97E-03
114	GO:0000272: polysaccharide catabolic process	8.97E-03
115	GO:0055046: microgametogenesis	1.08E-02
116	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.08E-02
117	GO:0006626: protein targeting to mitochondrion	1.08E-02
118	GO:0010102: lateral root morphogenesis	1.08E-02
119	GO:0006541: glutamine metabolic process	1.18E-02
120	GO:0009933: meristem structural organization	1.18E-02
121	GO:0007031: peroxisome organization	1.28E-02
122	GO:0010039: response to iron ion	1.28E-02
123	GO:0090351: seedling development	1.28E-02
124	GO:0070588: calcium ion transmembrane transport	1.28E-02
125	GO:0042753: positive regulation of circadian rhythm	1.38E-02
126	GO:0034976: response to endoplasmic reticulum stress	1.38E-02
127	GO:0006508: proteolysis	1.48E-02
128	GO:0006874: cellular calcium ion homeostasis	1.59E-02
129	GO:0043622: cortical microtubule organization	1.59E-02
130	GO:0007017: microtubule-based process	1.59E-02
131	GO:0048511: rhythmic process	1.70E-02
132	GO:0051321: meiotic cell cycle	1.70E-02
133	GO:0009651: response to salt stress	1.78E-02
134	GO:0007165: signal transduction	1.80E-02
135	GO:0080092: regulation of pollen tube growth	1.81E-02
136	GO:0071456: cellular response to hypoxia	1.81E-02
137	GO:0016226: iron-sulfur cluster assembly	1.81E-02
138	GO:0030433: ubiquitin-dependent ERAD pathway	1.81E-02
139	GO:0071369: cellular response to ethylene stimulus	1.93E-02
140	GO:0042127: regulation of cell proliferation	2.05E-02
141	GO:0006869: lipid transport	2.14E-02
142	GO:0010051: xylem and phloem pattern formation	2.29E-02
143	GO:0010087: phloem or xylem histogenesis	2.29E-02
144	GO:0006511: ubiquitin-dependent protein catabolic process	2.33E-02
145	GO:0048868: pollen tube development	2.42E-02
146	GO:0006885: regulation of pH	2.42E-02
147	GO:0006662: glycerol ether metabolic process	2.42E-02
148	GO:0006814: sodium ion transport	2.54E-02
149	GO:0048544: recognition of pollen	2.54E-02
150	GO:0055072: iron ion homeostasis	2.67E-02
151	GO:0006623: protein targeting to vacuole	2.67E-02
152	GO:0006891: intra-Golgi vesicle-mediated transport	2.81E-02
153	GO:0030163: protein catabolic process	3.08E-02
154	GO:0040008: regulation of growth	3.12E-02
155	GO:0010150: leaf senescence	3.27E-02
156	GO:0071805: potassium ion transmembrane transport	3.36E-02
157	GO:0000910: cytokinesis	3.50E-02
158	GO:0010468: regulation of gene expression	3.89E-02
159	GO:0006950: response to stress	4.10E-02
160	GO:0008219: cell death	4.41E-02
161	GO:0009817: defense response to fungus, incompatible interaction	4.41E-02
162	GO:0010311: lateral root formation	4.56E-02
163	GO:0009834: plant-type secondary cell wall biogenesis	4.72E-02
164	GO:0009407: toxin catabolic process	4.72E-02
165	GO:0006811: ion transport	4.72E-02
166	GO:0010043: response to zinc ion	4.88E-02
167	GO:0007568: aging	4.88E-02
168	GO:0048527: lateral root development	4.88E-02
169	GO:0009631: cold acclimation	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0008752: FMN reductase activity	0.00E+00
2	GO:0018580: nitronate monooxygenase activity	0.00E+00
3	GO:0019205: nucleobase-containing compound kinase activity	0.00E+00
4	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
5	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
6	GO:0008734: L-aspartate oxidase activity	0.00E+00
7	GO:0051670: inulinase activity	0.00E+00
8	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
9	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
10	GO:0044610: FMN transmembrane transporter activity	0.00E+00
11	GO:0051724: NAD transporter activity	3.65E-06
12	GO:0019779: Atg8 activating enzyme activity	3.65E-06
13	GO:0016301: kinase activity	1.38E-04
14	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.82E-04
15	GO:2001227: quercitrin binding	2.82E-04
16	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.82E-04
17	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.82E-04
18	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.82E-04
19	GO:0051669: fructan beta-fructosidase activity	2.82E-04
20	GO:0048037: cofactor binding	2.82E-04
21	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.82E-04
22	GO:0004348: glucosylceramidase activity	2.82E-04
23	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.82E-04
24	GO:0015230: FAD transmembrane transporter activity	2.82E-04
25	GO:0031219: levanase activity	2.82E-04
26	GO:2001147: camalexin binding	2.82E-04
27	GO:0019786: Atg8-specific protease activity	2.82E-04
28	GO:0008142: oxysterol binding	3.40E-04
29	GO:0005524: ATP binding	4.44E-04
30	GO:0022857: transmembrane transporter activity	5.06E-04
31	GO:0008047: enzyme activator activity	5.67E-04
32	GO:0015228: coenzyme A transmembrane transporter activity	6.19E-04
33	GO:0008460: dTDP-glucose 4,6-dehydratase activity	6.19E-04
34	GO:0010280: UDP-L-rhamnose synthase activity	6.19E-04
35	GO:0008428: ribonuclease inhibitor activity	6.19E-04
36	GO:1990585: hydroxyproline O-arabinosyltransferase activity	6.19E-04
37	GO:0032934: sterol binding	6.19E-04
38	GO:0008805: carbon-monoxide oxygenase activity	6.19E-04
39	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.19E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	6.19E-04
41	GO:0050377: UDP-glucose 4,6-dehydratase activity	6.19E-04
42	GO:0004385: guanylate kinase activity	6.19E-04
43	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	6.19E-04
44	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.19E-04
45	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.00E-03
46	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.00E-03
47	GO:0004190: aspartic-type endopeptidase activity	1.06E-03
48	GO:0004867: serine-type endopeptidase inhibitor activity	1.06E-03
49	GO:0008061: chitin binding	1.06E-03
50	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.44E-03
51	GO:0019201: nucleotide kinase activity	1.44E-03
52	GO:0035529: NADH pyrophosphatase activity	1.44E-03
53	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.44E-03
54	GO:0019776: Atg8 ligase activity	1.92E-03
55	GO:0016004: phospholipase activator activity	1.92E-03
56	GO:0004301: epoxide hydrolase activity	1.92E-03
57	GO:0047134: protein-disulfide reductase activity	2.21E-03
58	GO:0005459: UDP-galactose transmembrane transporter activity	2.46E-03
59	GO:0008948: oxaloacetate decarboxylase activity	2.46E-03
60	GO:0080122: AMP transmembrane transporter activity	2.46E-03
61	GO:0047631: ADP-ribose diphosphatase activity	2.46E-03
62	GO:0004674: protein serine/threonine kinase activity	2.71E-03
63	GO:0004791: thioredoxin-disulfide reductase activity	2.77E-03
64	GO:0016853: isomerase activity	2.77E-03
65	GO:0010181: FMN binding	2.77E-03
66	GO:0048040: UDP-glucuronate decarboxylase activity	3.03E-03
67	GO:1990538: xylan O-acetyltransferase activity	3.03E-03
68	GO:0031593: polyubiquitin binding	3.03E-03
69	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	3.03E-03
70	GO:0000210: NAD+ diphosphatase activity	3.03E-03
71	GO:0036402: proteasome-activating ATPase activity	3.03E-03
72	GO:0015385: sodium:proton antiporter activity	3.62E-03
73	GO:0051020: GTPase binding	3.65E-03
74	GO:0015217: ADP transmembrane transporter activity	3.65E-03
75	GO:0070403: NAD+ binding	3.65E-03
76	GO:0004017: adenylate kinase activity	3.65E-03
77	GO:0005347: ATP transmembrane transporter activity	3.65E-03
78	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.08E-03
79	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.30E-03
80	GO:0008235: metalloexopeptidase activity	4.30E-03
81	GO:0008320: protein transmembrane transporter activity	4.30E-03
82	GO:0043295: glutathione binding	4.30E-03
83	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.99E-03
84	GO:0004525: ribonuclease III activity	4.99E-03
85	GO:0005544: calcium-dependent phospholipid binding	4.99E-03
86	GO:0004708: MAP kinase kinase activity	4.99E-03
87	GO:0030247: polysaccharide binding	5.40E-03
88	GO:0008565: protein transporter activity	5.50E-03
89	GO:0015297: antiporter activity	6.22E-03
90	GO:0031490: chromatin DNA binding	7.28E-03
91	GO:0030234: enzyme regulator activity	8.11E-03
92	GO:0004568: chitinase activity	8.11E-03
93	GO:0008171: O-methyltransferase activity	8.11E-03
94	GO:0005545: 1-phosphatidylinositol binding	8.11E-03
95	GO:0004177: aminopeptidase activity	8.97E-03
96	GO:0008559: xenobiotic-transporting ATPase activity	8.97E-03
97	GO:0015386: potassium:proton antiporter activity	8.97E-03
98	GO:0015198: oligopeptide transporter activity	9.88E-03
99	GO:0005388: calcium-transporting ATPase activity	1.08E-02
100	GO:0004565: beta-galactosidase activity	1.08E-02
101	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.08E-02
102	GO:0005198: structural molecule activity	1.10E-02
103	GO:0031624: ubiquitin conjugating enzyme binding	1.18E-02
104	GO:0004175: endopeptidase activity	1.18E-02
105	GO:0051287: NAD binding	1.19E-02
106	GO:0005509: calcium ion binding	1.21E-02
107	GO:0017025: TBP-class protein binding	1.28E-02
108	GO:0004970: ionotropic glutamate receptor activity	1.28E-02
109	GO:0005217: intracellular ligand-gated ion channel activity	1.28E-02
110	GO:0043130: ubiquitin binding	1.48E-02
111	GO:0001046: core promoter sequence-specific DNA binding	1.48E-02
112	GO:0035251: UDP-glucosyltransferase activity	1.70E-02
113	GO:0004540: ribonuclease activity	1.70E-02
114	GO:0004298: threonine-type endopeptidase activity	1.70E-02
115	GO:0004707: MAP kinase activity	1.70E-02
116	GO:0051082: unfolded protein binding	1.89E-02
117	GO:0003756: protein disulfide isomerase activity	2.05E-02
118	GO:0005451: monovalent cation:proton antiporter activity	2.29E-02
119	GO:0030246: carbohydrate binding	2.30E-02
120	GO:0030276: clathrin binding	2.42E-02
121	GO:0001085: RNA polymerase II transcription factor binding	2.42E-02
122	GO:0015299: solute:proton antiporter activity	2.54E-02
123	GO:0005516: calmodulin binding	2.71E-02
124	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.05E-02
125	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.08E-02
126	GO:0005200: structural constituent of cytoskeleton	3.36E-02
127	GO:0051213: dioxygenase activity	3.65E-02
128	GO:0004683: calmodulin-dependent protein kinase activity	4.10E-02
129	GO:0016887: ATPase activity	4.26E-02
130	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.41E-02
131	GO:0005096: GTPase activator activity	4.56E-02
132	GO:0003824: catalytic activity	4.77E-02
133	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.88E-02
134	GO:0000287: magnesium ion binding	4.93E-02