co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0006216: cytidine catabolic process	0.00E+00
5	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
6	GO:0033198: response to ATP	0.00E+00
7	GO:0006952: defense response	1.44E-06
8	GO:0006468: protein phosphorylation	1.06E-05
9	GO:0042742: defense response to bacterium	5.64E-05
10	GO:0046470: phosphatidylcholine metabolic process	1.88E-04
11	GO:0010045: response to nickel cation	2.55E-04
12	GO:1902065: response to L-glutamate	2.55E-04
13	GO:0032491: detection of molecule of fungal origin	2.55E-04
14	GO:0042759: long-chain fatty acid biosynthetic process	2.55E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.55E-04
16	GO:0033306: phytol metabolic process	2.55E-04
17	GO:0051258: protein polymerization	5.64E-04
18	GO:0060919: auxin influx	5.64E-04
19	GO:0010115: regulation of abscisic acid biosynthetic process	5.64E-04
20	GO:0010042: response to manganese ion	5.64E-04
21	GO:0010271: regulation of chlorophyll catabolic process	5.64E-04
22	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.64E-04
23	GO:0080181: lateral root branching	5.64E-04
24	GO:0006499: N-terminal protein myristoylation	7.38E-04
25	GO:0034605: cellular response to heat	8.30E-04
26	GO:1900055: regulation of leaf senescence	9.15E-04
27	GO:0015695: organic cation transport	9.15E-04
28	GO:0010498: proteasomal protein catabolic process	9.15E-04
29	GO:0010306: rhamnogalacturonan II biosynthetic process	1.31E-03
30	GO:0015696: ammonium transport	1.31E-03
31	GO:0071323: cellular response to chitin	1.31E-03
32	GO:0046513: ceramide biosynthetic process	1.31E-03
33	GO:0071219: cellular response to molecule of bacterial origin	1.75E-03
34	GO:0045088: regulation of innate immune response	1.75E-03
35	GO:0072488: ammonium transmembrane transport	1.75E-03
36	GO:0022622: root system development	1.75E-03
37	GO:0033356: UDP-L-arabinose metabolic process	1.75E-03
38	GO:0042391: regulation of membrane potential	2.07E-03
39	GO:0009229: thiamine diphosphate biosynthetic process	2.23E-03
40	GO:0009247: glycolipid biosynthetic process	2.23E-03
41	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.75E-03
42	GO:0009228: thiamine biosynthetic process	2.75E-03
43	GO:0034314: Arp2/3 complex-mediated actin nucleation	2.75E-03
44	GO:1900425: negative regulation of defense response to bacterium	2.75E-03
45	GO:0033365: protein localization to organelle	2.75E-03
46	GO:0002238: response to molecule of fungal origin	2.75E-03
47	GO:0006014: D-ribose metabolic process	2.75E-03
48	GO:0009972: cytidine deamination	2.75E-03
49	GO:0010405: arabinogalactan protein metabolic process	2.75E-03
50	GO:0010315: auxin efflux	2.75E-03
51	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.30E-03
52	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.89E-03
53	GO:0010038: response to metal ion	3.89E-03
54	GO:1900056: negative regulation of leaf senescence	3.89E-03
55	GO:1900150: regulation of defense response to fungus	4.52E-03
56	GO:0009850: auxin metabolic process	4.52E-03
57	GO:0043068: positive regulation of programmed cell death	4.52E-03
58	GO:0019375: galactolipid biosynthetic process	4.52E-03
59	GO:0007165: signal transduction	4.72E-03
60	GO:0009751: response to salicylic acid	4.86E-03
61	GO:0006997: nucleus organization	5.18E-03
62	GO:0010150: leaf senescence	5.49E-03
63	GO:0010112: regulation of systemic acquired resistance	5.86E-03
64	GO:0009060: aerobic respiration	5.86E-03
65	GO:0000902: cell morphogenesis	5.86E-03
66	GO:0019432: triglyceride biosynthetic process	5.86E-03
67	GO:0010043: response to zinc ion	5.99E-03
68	GO:0007166: cell surface receptor signaling pathway	6.51E-03
69	GO:0045087: innate immune response	6.56E-03
70	GO:0010449: root meristem growth	6.58E-03
71	GO:0048268: clathrin coat assembly	6.58E-03
72	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.58E-03
73	GO:0010380: regulation of chlorophyll biosynthetic process	6.58E-03
74	GO:0007064: mitotic sister chromatid cohesion	7.33E-03
75	GO:0030148: sphingolipid biosynthetic process	8.11E-03
76	GO:0046856: phosphatidylinositol dephosphorylation	8.11E-03
77	GO:0009682: induced systemic resistance	8.11E-03
78	GO:0000266: mitochondrial fission	8.92E-03
79	GO:0006790: sulfur compound metabolic process	8.92E-03
80	GO:0012501: programmed cell death	8.92E-03
81	GO:0010102: lateral root morphogenesis	9.75E-03
82	GO:0055046: microgametogenesis	9.75E-03
83	GO:0000165: MAPK cascade	1.03E-02
84	GO:0007015: actin filament organization	1.06E-02
85	GO:0010540: basipetal auxin transport	1.06E-02
86	GO:0002237: response to molecule of bacterial origin	1.06E-02
87	GO:0006508: proteolysis	1.09E-02
88	GO:0006486: protein glycosylation	1.14E-02
89	GO:0070588: calcium ion transmembrane transport	1.15E-02
90	GO:0046854: phosphatidylinositol phosphorylation	1.15E-02
91	GO:0010053: root epidermal cell differentiation	1.15E-02
92	GO:0009825: multidimensional cell growth	1.15E-02
93	GO:0034976: response to endoplasmic reticulum stress	1.24E-02
94	GO:0080147: root hair cell development	1.34E-02
95	GO:2000377: regulation of reactive oxygen species metabolic process	1.34E-02
96	GO:0046777: protein autophosphorylation	1.37E-02
97	GO:0003333: amino acid transmembrane transport	1.53E-02
98	GO:0009814: defense response, incompatible interaction	1.64E-02
99	GO:0009561: megagametogenesis	1.85E-02
100	GO:0010584: pollen exine formation	1.85E-02
101	GO:0006284: base-excision repair	1.85E-02
102	GO:0016310: phosphorylation	1.86E-02
103	GO:0070417: cellular response to cold	1.95E-02
104	GO:0016042: lipid catabolic process	1.99E-02
105	GO:0008033: tRNA processing	2.07E-02
106	GO:0000413: protein peptidyl-prolyl isomerization	2.07E-02
107	GO:0071472: cellular response to salt stress	2.18E-02
108	GO:0048544: recognition of pollen	2.29E-02
109	GO:0019252: starch biosynthetic process	2.41E-02
110	GO:0010193: response to ozone	2.53E-02
111	GO:0000302: response to reactive oxygen species	2.53E-02
112	GO:0002229: defense response to oomycetes	2.53E-02
113	GO:0009630: gravitropism	2.65E-02
114	GO:0007264: small GTPase mediated signal transduction	2.65E-02
115	GO:0050832: defense response to fungus	2.67E-02
116	GO:0010090: trichome morphogenesis	2.78E-02
117	GO:0030163: protein catabolic process	2.78E-02
118	GO:0016567: protein ubiquitination	2.79E-02
119	GO:0009739: response to gibberellin	3.16E-02
120	GO:0051607: defense response to virus	3.16E-02
121	GO:0006470: protein dephosphorylation	3.23E-02
122	GO:0009816: defense response to bacterium, incompatible interaction	3.42E-02
123	GO:0006906: vesicle fusion	3.56E-02
124	GO:0016311: dephosphorylation	3.83E-02
125	GO:0016049: cell growth	3.83E-02
126	GO:0030244: cellulose biosynthetic process	3.97E-02
127	GO:0008219: cell death	3.97E-02
128	GO:0009817: defense response to fungus, incompatible interaction	3.97E-02
129	GO:0009738: abscisic acid-activated signaling pathway	4.04E-02
130	GO:0010311: lateral root formation	4.12E-02
131	GO:0009832: plant-type cell wall biogenesis	4.12E-02
132	GO:0048767: root hair elongation	4.12E-02
133	GO:0009407: toxin catabolic process	4.26E-02
134	GO:0009631: cold acclimation	4.41E-02
135	GO:0010119: regulation of stomatal movement	4.41E-02
136	GO:0035556: intracellular signal transduction	4.50E-02
137	GO:0006865: amino acid transport	4.55E-02
138	GO:0006970: response to osmotic stress	4.69E-02
139	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-02
140	GO:0016051: carbohydrate biosynthetic process	4.70E-02
141	GO:0006099: tricarboxylic acid cycle	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
3	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:2001080: chitosan binding	0.00E+00
7	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
8	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
9	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
10	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
11	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
12	GO:0047844: deoxycytidine deaminase activity	0.00E+00
13	GO:0016301: kinase activity	3.06E-07
14	GO:0004630: phospholipase D activity	7.67E-06
15	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.67E-06
16	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.53E-05
17	GO:0004674: protein serine/threonine kinase activity	1.73E-05
18	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	7.11E-05
19	GO:0005524: ATP binding	1.78E-04
20	GO:0019707: protein-cysteine S-acyltransferase activity	2.55E-04
21	GO:0046481: digalactosyldiacylglycerol synthase activity	2.55E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.55E-04
23	GO:0045140: inositol phosphoceramide synthase activity	5.64E-04
24	GO:0050291: sphingosine N-acyltransferase activity	5.64E-04
25	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	5.64E-04
26	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.37E-04
27	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.15E-04
28	GO:0000030: mannosyltransferase activity	9.15E-04
29	GO:0016174: NAD(P)H oxidase activity	9.15E-04
30	GO:0030552: cAMP binding	9.26E-04
31	GO:0030553: cGMP binding	9.26E-04
32	GO:0005216: ion channel activity	1.25E-03
33	GO:0035250: UDP-galactosyltransferase activity	1.31E-03
34	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.31E-03
35	GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	1.75E-03
36	GO:0010328: auxin influx transmembrane transporter activity	1.75E-03
37	GO:0019199: transmembrane receptor protein kinase activity	1.75E-03
38	GO:0005249: voltage-gated potassium channel activity	2.07E-03
39	GO:0030551: cyclic nucleotide binding	2.07E-03
40	GO:0004672: protein kinase activity	2.20E-03
41	GO:0008725: DNA-3-methyladenine glycosylase activity	2.23E-03
42	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.23E-03
43	GO:0035252: UDP-xylosyltransferase activity	2.75E-03
44	GO:0008519: ammonium transmembrane transporter activity	2.75E-03
45	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.75E-03
46	GO:0004709: MAP kinase kinase kinase activity	2.75E-03
47	GO:0004144: diacylglycerol O-acyltransferase activity	3.30E-03
48	GO:0019900: kinase binding	3.30E-03
49	GO:0004126: cytidine deaminase activity	3.30E-03
50	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.30E-03
51	GO:0004012: phospholipid-translocating ATPase activity	3.30E-03
52	GO:0004747: ribokinase activity	3.30E-03
53	GO:0004143: diacylglycerol kinase activity	3.89E-03
54	GO:0004252: serine-type endopeptidase activity	4.16E-03
55	GO:0008865: fructokinase activity	4.52E-03
56	GO:0004708: MAP kinase kinase activity	4.52E-03
57	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.52E-03
58	GO:0003951: NAD+ kinase activity	5.18E-03
59	GO:0005515: protein binding	5.41E-03
60	GO:0071949: FAD binding	5.86E-03
61	GO:0030955: potassium ion binding	6.58E-03
62	GO:0004743: pyruvate kinase activity	6.58E-03
63	GO:0005545: 1-phosphatidylinositol binding	7.33E-03
64	GO:0004713: protein tyrosine kinase activity	7.33E-03
65	GO:0008559: xenobiotic-transporting ATPase activity	8.11E-03
66	GO:0000049: tRNA binding	8.92E-03
67	GO:0008378: galactosyltransferase activity	8.92E-03
68	GO:0000287: magnesium ion binding	9.35E-03
69	GO:0010329: auxin efflux transmembrane transporter activity	9.75E-03
70	GO:0005388: calcium-transporting ATPase activity	9.75E-03
71	GO:0008061: chitin binding	1.15E-02
72	GO:0004190: aspartic-type endopeptidase activity	1.15E-02
73	GO:0031625: ubiquitin protein ligase binding	1.27E-02
74	GO:0008134: transcription factor binding	1.34E-02
75	GO:0033612: receptor serine/threonine kinase binding	1.53E-02
76	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.53E-02
77	GO:0008408: 3'-5' exonuclease activity	1.53E-02
78	GO:0042803: protein homodimerization activity	1.68E-02
79	GO:0004871: signal transducer activity	1.68E-02
80	GO:0003756: protein disulfide isomerase activity	1.85E-02
81	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.85E-02
82	GO:0004842: ubiquitin-protein transferase activity	1.88E-02
83	GO:0005102: receptor binding	1.95E-02
84	GO:0004527: exonuclease activity	2.18E-02
85	GO:0003713: transcription coactivator activity	2.18E-02
86	GO:0030276: clathrin binding	2.18E-02
87	GO:0005516: calmodulin binding	2.19E-02
88	GO:0010181: FMN binding	2.29E-02
89	GO:0019901: protein kinase binding	2.41E-02
90	GO:0004197: cysteine-type endopeptidase activity	2.65E-02
91	GO:0005509: calcium ion binding	3.01E-02
92	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.03E-02
93	GO:0008237: metallopeptidase activity	3.03E-02
94	GO:0005200: structural constituent of cytoskeleton	3.03E-02
95	GO:0008194: UDP-glycosyltransferase activity	3.16E-02
96	GO:0008375: acetylglucosaminyltransferase activity	3.56E-02
97	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.56E-02
98	GO:0004683: calmodulin-dependent protein kinase activity	3.70E-02
99	GO:0004806: triglyceride lipase activity	3.70E-02
100	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.83E-02
101	GO:0008236: serine-type peptidase activity	3.83E-02
102	GO:0004222: metalloendopeptidase activity	4.26E-02
103	GO:0046982: protein heterodimerization activity	4.28E-02
104	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.41E-02
105	GO:0043531: ADP binding	4.77E-02