co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:0006066: alcohol metabolic process	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:0061635: regulation of protein complex stability	0.00E+00
5	GO:0015979: photosynthesis	1.51E-18
6	GO:0090391: granum assembly	3.37E-09
7	GO:0009773: photosynthetic electron transport in photosystem I	4.93E-08
8	GO:0009768: photosynthesis, light harvesting in photosystem I	3.58E-07
9	GO:0010196: nonphotochemical quenching	6.36E-07
10	GO:0009735: response to cytokinin	7.18E-07
11	GO:0010206: photosystem II repair	2.05E-06
12	GO:0071484: cellular response to light intensity	7.44E-06
13	GO:0018298: protein-chromophore linkage	9.19E-06
14	GO:0010218: response to far red light	1.13E-05
15	GO:0009637: response to blue light	1.51E-05
16	GO:0010114: response to red light	2.54E-05
17	GO:0009645: response to low light intensity stimulus	6.54E-05
18	GO:0032544: plastid translation	1.07E-04
19	GO:0080093: regulation of photorespiration	1.30E-04
20	GO:0031998: regulation of fatty acid beta-oxidation	1.30E-04
21	GO:0019510: S-adenosylhomocysteine catabolic process	1.30E-04
22	GO:0015995: chlorophyll biosynthetic process	1.61E-04
23	GO:0018119: peptidyl-cysteine S-nitrosylation	2.19E-04
24	GO:0055114: oxidation-reduction process	2.24E-04
25	GO:0033353: S-adenosylmethionine cycle	2.99E-04
26	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.99E-04
27	GO:0042819: vitamin B6 biosynthetic process	2.99E-04
28	GO:0019253: reductive pentose-phosphate cycle	3.27E-04
29	GO:0010207: photosystem II assembly	3.27E-04
30	GO:0009644: response to high light intensity	4.01E-04
31	GO:0006636: unsaturated fatty acid biosynthetic process	4.10E-04
32	GO:0006518: peptide metabolic process	4.92E-04
33	GO:0016570: histone modification	4.92E-04
34	GO:0009416: response to light stimulus	5.78E-04
35	GO:0042823: pyridoxal phosphate biosynthetic process	7.04E-04
36	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	7.04E-04
37	GO:0006662: glycerol ether metabolic process	8.87E-04
38	GO:0006546: glycine catabolic process	9.34E-04
39	GO:0015976: carbon utilization	9.34E-04
40	GO:0019464: glycine decarboxylation via glycine cleavage system	9.34E-04
41	GO:0009765: photosynthesis, light harvesting	9.34E-04
42	GO:0010600: regulation of auxin biosynthetic process	9.34E-04
43	GO:0006656: phosphatidylcholine biosynthetic process	1.18E-03
44	GO:0043097: pyrimidine nucleoside salvage	1.18E-03
45	GO:0010117: photoprotection	1.18E-03
46	GO:0006097: glyoxylate cycle	1.18E-03
47	GO:0006461: protein complex assembly	1.18E-03
48	GO:0010190: cytochrome b6f complex assembly	1.45E-03
49	GO:0050665: hydrogen peroxide biosynthetic process	1.45E-03
50	GO:0006206: pyrimidine nucleobase metabolic process	1.45E-03
51	GO:0010027: thylakoid membrane organization	1.55E-03
52	GO:0016126: sterol biosynthetic process	1.55E-03
53	GO:0009854: oxidative photosynthetic carbon pathway	1.73E-03
54	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.73E-03
55	GO:0009769: photosynthesis, light harvesting in photosystem II	2.04E-03
56	GO:1900057: positive regulation of leaf senescence	2.04E-03
57	GO:0006368: transcription elongation from RNA polymerase II promoter	2.04E-03
58	GO:0009772: photosynthetic electron transport in photosystem II	2.04E-03
59	GO:0010928: regulation of auxin mediated signaling pathway	2.36E-03
60	GO:0009642: response to light intensity	2.36E-03
61	GO:0034599: cellular response to oxidative stress	2.65E-03
62	GO:0022900: electron transport chain	2.69E-03
63	GO:0009657: plastid organization	2.69E-03
64	GO:0009658: chloroplast organization	2.82E-03
65	GO:0006783: heme biosynthetic process	3.04E-03
66	GO:0006754: ATP biosynthetic process	3.04E-03
67	GO:0009245: lipid A biosynthetic process	3.04E-03
68	GO:0042761: very long-chain fatty acid biosynthetic process	3.41E-03
69	GO:0010205: photoinhibition	3.41E-03
70	GO:0006779: porphyrin-containing compound biosynthetic process	3.41E-03
71	GO:0080167: response to karrikin	3.71E-03
72	GO:0006782: protoporphyrinogen IX biosynthetic process	3.79E-03
73	GO:0006810: transport	3.89E-03
74	GO:0043085: positive regulation of catalytic activity	4.18E-03
75	GO:0009698: phenylpropanoid metabolic process	4.18E-03
76	GO:0045454: cell redox homeostasis	4.66E-03
77	GO:0006108: malate metabolic process	5.00E-03
78	GO:0006006: glucose metabolic process	5.00E-03
79	GO:0009767: photosynthetic electron transport chain	5.00E-03
80	GO:0010143: cutin biosynthetic process	5.44E-03
81	GO:0007031: peroxisome organization	5.88E-03
82	GO:0031408: oxylipin biosynthetic process	7.79E-03
83	GO:0009269: response to desiccation	7.79E-03
84	GO:0042742: defense response to bacterium	8.00E-03
85	GO:0006730: one-carbon metabolic process	8.30E-03
86	GO:0007005: mitochondrion organization	8.30E-03
87	GO:0030245: cellulose catabolic process	8.30E-03
88	GO:0040007: growth	8.82E-03
89	GO:0009693: ethylene biosynthetic process	8.82E-03
90	GO:0006633: fatty acid biosynthetic process	9.79E-03
91	GO:0042335: cuticle development	1.04E-02
92	GO:0000413: protein peptidyl-prolyl isomerization	1.04E-02
93	GO:0042631: cellular response to water deprivation	1.04E-02
94	GO:0015986: ATP synthesis coupled proton transport	1.16E-02
95	GO:0006814: sodium ion transport	1.16E-02
96	GO:0009646: response to absence of light	1.16E-02
97	GO:0008654: phospholipid biosynthetic process	1.22E-02
98	GO:0009409: response to cold	1.26E-02
99	GO:0010193: response to ozone	1.28E-02
100	GO:0010583: response to cyclopentenone	1.34E-02
101	GO:0009627: systemic acquired resistance	1.79E-02
102	GO:0016311: dephosphorylation	1.93E-02
103	GO:0007568: aging	2.22E-02
104	GO:0009631: cold acclimation	2.22E-02
105	GO:0009853: photorespiration	2.37E-02
106	GO:0006099: tricarboxylic acid cycle	2.45E-02
107	GO:0006869: lipid transport	2.72E-02
108	GO:0032259: methylation	2.93E-02
109	GO:0006812: cation transport	3.34E-02
110	GO:0009585: red, far-red light phototransduction	3.51E-02
111	GO:0010224: response to UV-B	3.60E-02
112	GO:0006857: oligopeptide transport	3.68E-02
113	GO:0009909: regulation of flower development	3.77E-02
114	GO:0006096: glycolytic process	3.95E-02
115	GO:0043086: negative regulation of catalytic activity	3.95E-02
116	GO:0009624: response to nematode	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
2	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
3	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
4	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
5	GO:0008974: phosphoribulokinase activity	0.00E+00
6	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
7	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
8	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
9	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
10	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
11	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
12	GO:0031409: pigment binding	2.20E-07
13	GO:0016168: chlorophyll binding	5.86E-06
14	GO:0004506: squalene monooxygenase activity	1.40E-05
15	GO:0048038: quinone binding	7.36E-05
16	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.07E-04
17	GO:0009374: biotin binding	1.30E-04
18	GO:0030794: (S)-coclaurine-N-methyltransferase activity	1.30E-04
19	GO:0004451: isocitrate lyase activity	1.30E-04
20	GO:0004013: adenosylhomocysteinase activity	1.30E-04
21	GO:0016491: oxidoreductase activity	1.90E-04
22	GO:0009055: electron carrier activity	2.28E-04
23	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	2.99E-04
24	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.99E-04
25	GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding	2.99E-04
26	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.99E-04
27	GO:0008883: glutamyl-tRNA reductase activity	2.99E-04
28	GO:0016868: intramolecular transferase activity, phosphotransferases	2.99E-04
29	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.99E-04
30	GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding	4.92E-04
31	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.92E-04
32	GO:0016851: magnesium chelatase activity	7.04E-04
33	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	7.04E-04
34	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	7.04E-04
35	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	7.04E-04
36	GO:0004375: glycine dehydrogenase (decarboxylating) activity	7.04E-04
37	GO:0047134: protein-disulfide reductase activity	7.67E-04
38	GO:0015035: protein disulfide oxidoreductase activity	8.57E-04
39	GO:0008891: glycolate oxidase activity	9.34E-04
40	GO:0008453: alanine-glyoxylate transaminase activity	9.34E-04
41	GO:0052793: pectin acetylesterase activity	9.34E-04
42	GO:0004791: thioredoxin-disulfide reductase activity	9.50E-04
43	GO:0003989: acetyl-CoA carboxylase activity	1.18E-03
44	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.23E-03
45	GO:0016791: phosphatase activity	1.30E-03
46	GO:0031177: phosphopantetheine binding	1.45E-03
47	GO:0016615: malate dehydrogenase activity	1.45E-03
48	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.45E-03
49	GO:0030060: L-malate dehydrogenase activity	1.73E-03
50	GO:0004849: uridine kinase activity	1.73E-03
51	GO:0000035: acyl binding	1.73E-03
52	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.36E-03
53	GO:0003993: acid phosphatase activity	2.65E-03
54	GO:0050661: NADP binding	2.88E-03
55	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	3.04E-03
56	GO:0050660: flavin adenine dinucleotide binding	3.40E-03
57	GO:0051537: 2 iron, 2 sulfur cluster binding	3.52E-03
58	GO:0008047: enzyme activator activity	3.79E-03
59	GO:0051287: NAD binding	3.93E-03
60	GO:0005315: inorganic phosphate transmembrane transporter activity	5.00E-03
61	GO:0004089: carbonate dehydratase activity	5.00E-03
62	GO:0031072: heat shock protein binding	5.00E-03
63	GO:0043424: protein histidine kinase binding	7.30E-03
64	GO:0008810: cellulase activity	8.82E-03
65	GO:0003756: protein disulfide isomerase activity	9.35E-03
66	GO:0008514: organic anion transmembrane transporter activity	9.35E-03
67	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.10E-02
68	GO:0010181: FMN binding	1.16E-02
69	GO:0042802: identical protein binding	1.37E-02
70	GO:0004721: phosphoprotein phosphatase activity	1.86E-02
71	GO:0004222: metalloendopeptidase activity	2.15E-02
72	GO:0030145: manganese ion binding	2.22E-02
73	GO:0003735: structural constituent of ribosome	2.25E-02
74	GO:0046872: metal ion binding	2.72E-02
75	GO:0004185: serine-type carboxypeptidase activity	2.84E-02
76	GO:0015293: symporter activity	3.08E-02
77	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.17E-02
78	GO:0005515: protein binding	4.11E-02
79	GO:0008289: lipid binding	4.24E-02
80	GO:0051082: unfolded protein binding	4.51E-02
81	GO:0016746: transferase activity, transferring acyl groups	4.60E-02