co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035266: meristem growth	4.88E-05
2	GO:0007292: female gamete generation	4.88E-05
3	GO:0006511: ubiquitin-dependent protein catabolic process	8.13E-05
4	GO:0010540: basipetal auxin transport	8.25E-05
5	GO:0006672: ceramide metabolic process	1.20E-04
6	GO:0051788: response to misfolded protein	1.20E-04
7	GO:0018345: protein palmitoylation	1.20E-04
8	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	1.20E-04
9	GO:0080183: response to photooxidative stress	1.20E-04
10	GO:0018342: protein prenylation	2.06E-04
11	GO:0060968: regulation of gene silencing	2.06E-04
12	GO:0055074: calcium ion homeostasis	2.06E-04
13	GO:0030163: protein catabolic process	3.54E-04
14	GO:0007166: cell surface receptor signaling pathway	3.80E-04
15	GO:0006536: glutamate metabolic process	4.04E-04
16	GO:0048578: positive regulation of long-day photoperiodism, flowering	5.13E-04
17	GO:0009823: cytokinin catabolic process	5.13E-04
18	GO:0046283: anthocyanin-containing compound metabolic process	5.13E-04
19	GO:0097428: protein maturation by iron-sulfur cluster transfer	5.13E-04
20	GO:0048232: male gamete generation	6.29E-04
21	GO:0043248: proteasome assembly	6.29E-04
22	GO:0042176: regulation of protein catabolic process	6.29E-04
23	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.29E-04
24	GO:0048827: phyllome development	6.29E-04
25	GO:0009407: toxin catabolic process	6.38E-04
26	GO:0080027: response to herbivore	8.75E-04
27	GO:0045454: cell redox homeostasis	9.09E-04
28	GO:0010078: maintenance of root meristem identity	1.01E-03
29	GO:0007186: G-protein coupled receptor signaling pathway	1.14E-03
30	GO:0009657: plastid organization	1.14E-03
31	GO:0010204: defense response signaling pathway, resistance gene-independent	1.14E-03
32	GO:0046685: response to arsenic-containing substance	1.28E-03
33	GO:0043067: regulation of programmed cell death	1.43E-03
34	GO:0048829: root cap development	1.59E-03
35	GO:0010015: root morphogenesis	1.75E-03
36	GO:0043085: positive regulation of catalytic activity	1.75E-03
37	GO:0010102: lateral root morphogenesis	2.08E-03
38	GO:0046686: response to cadmium ion	2.14E-03
39	GO:0009266: response to temperature stimulus	2.26E-03
40	GO:0009933: meristem structural organization	2.26E-03
41	GO:0090351: seedling development	2.44E-03
42	GO:0000162: tryptophan biosynthetic process	2.62E-03
43	GO:0006874: cellular calcium ion homeostasis	3.01E-03
44	GO:0030433: ubiquitin-dependent ERAD pathway	3.41E-03
45	GO:0071456: cellular response to hypoxia	3.41E-03
46	GO:0009625: response to insect	3.61E-03
47	GO:0010227: floral organ abscission	3.61E-03
48	GO:0055114: oxidation-reduction process	3.75E-03
49	GO:0016117: carotenoid biosynthetic process	4.04E-03
50	GO:0010118: stomatal movement	4.26E-03
51	GO:0006885: regulation of pH	4.48E-03
52	GO:0006662: glycerol ether metabolic process	4.48E-03
53	GO:0006623: protein targeting to vacuole	4.94E-03
54	GO:0006891: intra-Golgi vesicle-mediated transport	5.18E-03
55	GO:0019761: glucosinolate biosynthetic process	5.42E-03
56	GO:0042742: defense response to bacterium	5.89E-03
57	GO:0046777: protein autophosphorylation	6.02E-03
58	GO:0009615: response to virus	6.67E-03
59	GO:0006468: protein phosphorylation	7.06E-03
60	GO:0009627: systemic acquired resistance	7.20E-03
61	GO:0006906: vesicle fusion	7.20E-03
62	GO:0006888: ER to Golgi vesicle-mediated transport	7.48E-03
63	GO:0009817: defense response to fungus, incompatible interaction	8.03E-03
64	GO:0008219: cell death	8.03E-03
65	GO:0010311: lateral root formation	8.31E-03
66	GO:0006499: N-terminal protein myristoylation	8.60E-03
67	GO:0048527: lateral root development	8.88E-03
68	GO:0010043: response to zinc ion	8.88E-03
69	GO:0045087: innate immune response	9.47E-03
70	GO:0006099: tricarboxylic acid cycle	9.77E-03
71	GO:0034599: cellular response to oxidative stress	9.77E-03
72	GO:0009734: auxin-activated signaling pathway	1.17E-02
73	GO:0009644: response to high light intensity	1.20E-02
74	GO:0009636: response to toxic substance	1.23E-02
75	GO:0009965: leaf morphogenesis	1.23E-02
76	GO:0006855: drug transmembrane transport	1.26E-02
77	GO:0000165: MAPK cascade	1.30E-02
78	GO:0006812: cation transport	1.33E-02
79	GO:0009809: lignin biosynthetic process	1.40E-02
80	GO:0006813: potassium ion transport	1.40E-02
81	GO:0048367: shoot system development	1.61E-02
82	GO:0009626: plant-type hypersensitive response	1.65E-02
83	GO:0009624: response to nematode	1.79E-02
84	GO:0006396: RNA processing	1.83E-02
85	GO:0009742: brassinosteroid mediated signaling pathway	1.87E-02
86	GO:0055085: transmembrane transport	1.88E-02
87	GO:0009058: biosynthetic process	2.18E-02
88	GO:0009845: seed germination	2.23E-02
89	GO:0050832: defense response to fungus	2.34E-02
90	GO:0045490: pectin catabolic process	2.65E-02
91	GO:0009651: response to salt stress	2.72E-02
92	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.87E-02
93	GO:0010468: regulation of gene expression	3.00E-02
94	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	3.42E-02
95	GO:0009658: chloroplast organization	3.61E-02
96	GO:0009723: response to ethylene	4.01E-02
97	GO:0080167: response to karrikin	4.21E-02
98	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.31E-02
99	GO:0015979: photosynthesis	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0001729: ceramide kinase activity	0.00E+00
3	GO:2001227: quercitrin binding	4.88E-05
4	GO:0048037: cofactor binding	4.88E-05
5	GO:2001147: camalexin binding	4.88E-05
6	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.20E-04
7	GO:0018708: thiol S-methyltransferase activity	1.20E-04
8	GO:0008517: folic acid transporter activity	1.20E-04
9	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.20E-04
10	GO:0015035: protein disulfide oxidoreductase activity	1.58E-04
11	GO:0004324: ferredoxin-NADP+ reductase activity	2.06E-04
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.91E-04
13	GO:0004351: glutamate decarboxylase activity	3.01E-04
14	GO:0004834: tryptophan synthase activity	4.04E-04
15	GO:0009916: alternative oxidase activity	4.04E-04
16	GO:0019139: cytokinin dehydrogenase activity	5.13E-04
17	GO:0036402: proteasome-activating ATPase activity	6.29E-04
18	GO:0043295: glutathione binding	8.75E-04
19	GO:0004364: glutathione transferase activity	8.93E-04
20	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.01E-03
21	GO:0005198: structural molecule activity	1.04E-03
22	GO:0003951: NAD+ kinase activity	1.14E-03
23	GO:0030234: enzyme regulator activity	1.59E-03
24	GO:0008047: enzyme activator activity	1.59E-03
25	GO:0008794: arsenate reductase (glutaredoxin) activity	1.75E-03
26	GO:0008327: methyl-CpG binding	1.75E-03
27	GO:0008559: xenobiotic-transporting ATPase activity	1.75E-03
28	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.91E-03
29	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.08E-03
30	GO:0004022: alcohol dehydrogenase (NAD) activity	2.08E-03
31	GO:0008131: primary amine oxidase activity	2.26E-03
32	GO:0030170: pyridoxal phosphate binding	2.39E-03
33	GO:0005217: intracellular ligand-gated ion channel activity	2.44E-03
34	GO:0017025: TBP-class protein binding	2.44E-03
35	GO:0008061: chitin binding	2.44E-03
36	GO:0004970: ionotropic glutamate receptor activity	2.44E-03
37	GO:0004540: ribonuclease activity	3.20E-03
38	GO:0004298: threonine-type endopeptidase activity	3.20E-03
39	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.82E-03
40	GO:0047134: protein-disulfide reductase activity	4.04E-03
41	GO:0005451: monovalent cation:proton antiporter activity	4.26E-03
42	GO:0004791: thioredoxin-disulfide reductase activity	4.71E-03
43	GO:0015299: solute:proton antiporter activity	4.71E-03
44	GO:0050660: flavin adenine dinucleotide binding	5.26E-03
45	GO:0015385: sodium:proton antiporter activity	5.66E-03
46	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.66E-03
47	GO:0008237: metallopeptidase activity	6.16E-03
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.88E-03
49	GO:0009055: electron carrier activity	8.92E-03
50	GO:0016301: kinase activity	9.02E-03
51	GO:0000149: SNARE binding	1.01E-02
52	GO:0050661: NADP binding	1.04E-02
53	GO:0005484: SNAP receptor activity	1.13E-02
54	GO:0051537: 2 iron, 2 sulfur cluster binding	1.20E-02
55	GO:0005524: ATP binding	1.62E-02
56	GO:0016874: ligase activity	1.72E-02
57	GO:0003779: actin binding	1.76E-02
58	GO:0051082: unfolded protein binding	1.79E-02
59	GO:0005507: copper ion binding	2.11E-02
60	GO:0004252: serine-type endopeptidase activity	2.27E-02
61	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.31E-02
62	GO:0005509: calcium ion binding	2.77E-02
63	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.14E-02
64	GO:0008168: methyltransferase activity	3.52E-02
65	GO:0000287: magnesium ion binding	3.56E-02
66	GO:0004601: peroxidase activity	3.61E-02
67	GO:0008233: peptidase activity	4.16E-02
68	GO:0004497: monooxygenase activity	4.21E-02
69	GO:0004674: protein serine/threonine kinase activity	4.37E-02
70	GO:0004672: protein kinase activity	4.39E-02
71	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.78E-02
72	GO:0004871: signal transducer activity	4.94E-02
73	GO:0042803: protein homodimerization activity	4.94E-02