Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G07820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031222: arabinan catabolic process0.00E+00
2GO:0006429: leucyl-tRNA aminoacylation0.00E+00
3GO:1905421: regulation of plant organ morphogenesis0.00E+00
4GO:0030155: regulation of cell adhesion0.00E+00
5GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
6GO:0090071: negative regulation of ribosome biogenesis0.00E+00
7GO:0009606: tropism0.00E+00
8GO:0031116: positive regulation of microtubule polymerization0.00E+00
9GO:0010068: protoderm histogenesis0.00E+00
10GO:1903224: regulation of endodermal cell differentiation0.00E+00
11GO:0007638: mechanosensory behavior0.00E+00
12GO:1905177: tracheary element differentiation0.00E+00
13GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
14GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
15GO:0045184: establishment of protein localization0.00E+00
16GO:0009734: auxin-activated signaling pathway1.07E-09
17GO:0046620: regulation of organ growth8.86E-09
18GO:0009658: chloroplast organization5.50E-07
19GO:0009926: auxin polar transport1.44E-06
20GO:0009733: response to auxin5.51E-06
21GO:0006418: tRNA aminoacylation for protein translation3.83E-05
22GO:0001578: microtubule bundle formation4.92E-05
23GO:0009657: plastid organization5.67E-05
24GO:0007389: pattern specification process5.67E-05
25GO:0040008: regulation of growth5.90E-05
26GO:0000373: Group II intron splicing7.64E-05
27GO:0051322: anaphase1.78E-04
28GO:0010252: auxin homeostasis2.45E-04
29GO:0009790: embryo development2.60E-04
30GO:0009664: plant-type cell wall organization2.81E-04
31GO:0009416: response to light stimulus3.04E-04
32GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.94E-04
33GO:0042371: vitamin K biosynthetic process5.83E-04
34GO:0035987: endodermal cell differentiation5.83E-04
35GO:0006436: tryptophanyl-tRNA aminoacylation5.83E-04
36GO:0034080: CENP-A containing nucleosome assembly5.83E-04
37GO:0006747: FAD biosynthetic process5.83E-04
38GO:0010729: positive regulation of hydrogen peroxide biosynthetic process5.83E-04
39GO:0006419: alanyl-tRNA aminoacylation5.83E-04
40GO:0042659: regulation of cell fate specification5.83E-04
41GO:0051418: microtubule nucleation by microtubule organizing center5.83E-04
42GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process5.83E-04
43GO:0070509: calcium ion import5.83E-04
44GO:1901537: positive regulation of DNA demethylation5.83E-04
45GO:0006438: valyl-tRNA aminoacylation5.83E-04
46GO:0090558: plant epidermis development5.83E-04
47GO:0010480: microsporocyte differentiation5.83E-04
48GO:0048528: post-embryonic root development6.46E-04
49GO:0009958: positive gravitropism1.04E-03
50GO:1904143: positive regulation of carotenoid biosynthetic process1.25E-03
51GO:0006508: proteolysis1.25E-03
52GO:2000123: positive regulation of stomatal complex development1.25E-03
53GO:0033566: gamma-tubulin complex localization1.25E-03
54GO:0060359: response to ammonium ion1.25E-03
55GO:1902326: positive regulation of chlorophyll biosynthetic process1.25E-03
56GO:0018026: peptidyl-lysine monomethylation1.25E-03
57GO:0009220: pyrimidine ribonucleotide biosynthetic process1.25E-03
58GO:0006949: syncytium formation1.61E-03
59GO:0009451: RNA modification1.68E-03
60GO:0009828: plant-type cell wall loosening1.74E-03
61GO:0007275: multicellular organism development1.85E-03
62GO:0010015: root morphogenesis1.87E-03
63GO:0043157: response to cation stress2.06E-03
64GO:0007052: mitotic spindle organization2.06E-03
65GO:0045910: negative regulation of DNA recombination2.06E-03
66GO:0048281: inflorescence morphogenesis2.06E-03
67GO:0051127: positive regulation of actin nucleation2.06E-03
68GO:0090708: specification of plant organ axis polarity2.06E-03
69GO:0006954: inflammatory response2.06E-03
70GO:0010623: programmed cell death involved in cell development2.06E-03
71GO:0010027: thylakoid membrane organization2.18E-03
72GO:0009767: photosynthetic electron transport chain2.43E-03
73GO:2000012: regulation of auxin polar transport2.43E-03
74GO:0010207: photosystem II assembly2.75E-03
75GO:0016556: mRNA modification3.00E-03
76GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.00E-03
77GO:0034508: centromere complex assembly3.00E-03
78GO:1902476: chloride transmembrane transport3.00E-03
79GO:0051513: regulation of monopolar cell growth3.00E-03
80GO:0007231: osmosensory signaling pathway3.00E-03
81GO:0051639: actin filament network formation3.00E-03
82GO:0009226: nucleotide-sugar biosynthetic process3.00E-03
83GO:0048645: animal organ formation3.00E-03
84GO:0044211: CTP salvage3.00E-03
85GO:0019048: modulation by virus of host morphology or physiology3.00E-03
86GO:0046739: transport of virus in multicellular host3.00E-03
87GO:0090307: mitotic spindle assembly3.00E-03
88GO:2000904: regulation of starch metabolic process3.00E-03
89GO:0051289: protein homotetramerization3.00E-03
90GO:0031048: chromatin silencing by small RNA3.00E-03
91GO:0010148: transpiration3.00E-03
92GO:0070588: calcium ion transmembrane transport3.08E-03
93GO:0005992: trehalose biosynthetic process3.82E-03
94GO:0044206: UMP salvage4.04E-03
95GO:0051764: actin crosslink formation4.04E-03
96GO:0030104: water homeostasis4.04E-03
97GO:0033500: carbohydrate homeostasis4.04E-03
98GO:2000038: regulation of stomatal complex development4.04E-03
99GO:0022622: root system development4.04E-03
100GO:0044205: 'de novo' UMP biosynthetic process4.04E-03
101GO:0051567: histone H3-K9 methylation4.04E-03
102GO:0010508: positive regulation of autophagy4.04E-03
103GO:0007020: microtubule nucleation4.04E-03
104GO:0051302: regulation of cell division4.22E-03
105GO:0016998: cell wall macromolecule catabolic process4.64E-03
106GO:0006730: one-carbon metabolic process5.08E-03
107GO:0031348: negative regulation of defense response5.08E-03
108GO:0016123: xanthophyll biosynthetic process5.19E-03
109GO:0010158: abaxial cell fate specification5.19E-03
110GO:0010375: stomatal complex patterning5.19E-03
111GO:0046785: microtubule polymerization5.19E-03
112GO:0032543: mitochondrial translation5.19E-03
113GO:0010236: plastoquinone biosynthetic process5.19E-03
114GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.55E-03
115GO:0010082: regulation of root meristem growth5.55E-03
116GO:0010405: arabinogalactan protein metabolic process6.43E-03
117GO:0009959: negative gravitropism6.43E-03
118GO:0006655: phosphatidylglycerol biosynthetic process6.43E-03
119GO:0042793: transcription from plastid promoter6.43E-03
120GO:0010315: auxin efflux6.43E-03
121GO:0016458: gene silencing6.43E-03
122GO:0006206: pyrimidine nucleobase metabolic process6.43E-03
123GO:0050665: hydrogen peroxide biosynthetic process6.43E-03
124GO:0032973: amino acid export6.43E-03
125GO:0018258: protein O-linked glycosylation via hydroxyproline6.43E-03
126GO:0000226: microtubule cytoskeleton organization7.09E-03
127GO:0008033: tRNA processing7.09E-03
128GO:0009741: response to brassinosteroid7.65E-03
129GO:1901259: chloroplast rRNA processing7.77E-03
130GO:0009854: oxidative photosynthetic carbon pathway7.77E-03
131GO:0080086: stamen filament development7.77E-03
132GO:2000067: regulation of root morphogenesis7.77E-03
133GO:0042372: phylloquinone biosynthetic process7.77E-03
134GO:0017148: negative regulation of translation7.77E-03
135GO:0009942: longitudinal axis specification7.77E-03
136GO:0030488: tRNA methylation7.77E-03
137GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process9.20E-03
138GO:0010103: stomatal complex morphogenesis9.20E-03
139GO:0032880: regulation of protein localization9.20E-03
140GO:0006955: immune response9.20E-03
141GO:0009772: photosynthetic electron transport in photosystem II9.20E-03
142GO:0043090: amino acid import9.20E-03
143GO:0006821: chloride transport9.20E-03
144GO:0070370: cellular heat acclimation9.20E-03
145GO:0010050: vegetative phase change9.20E-03
146GO:0048437: floral organ development9.20E-03
147GO:0010444: guard mother cell differentiation9.20E-03
148GO:0006400: tRNA modification9.20E-03
149GO:0030307: positive regulation of cell growth9.20E-03
150GO:0032502: developmental process1.01E-02
151GO:0009630: gravitropism1.01E-02
152GO:0010583: response to cyclopentenone1.01E-02
153GO:0006353: DNA-templated transcription, termination1.07E-02
154GO:0048766: root hair initiation1.07E-02
155GO:0070413: trehalose metabolism in response to stress1.07E-02
156GO:0055075: potassium ion homeostasis1.07E-02
157GO:0009231: riboflavin biosynthetic process1.07E-02
158GO:0048564: photosystem I assembly1.07E-02
159GO:0001522: pseudouridine synthesis1.07E-02
160GO:0009850: auxin metabolic process1.07E-02
161GO:0009704: de-etiolation1.07E-02
162GO:0042255: ribosome assembly1.07E-02
163GO:0001558: regulation of cell growth1.23E-02
164GO:0009827: plant-type cell wall modification1.23E-02
165GO:0009826: unidimensional cell growth1.23E-02
166GO:0010204: defense response signaling pathway, resistance gene-independent1.23E-02
167GO:0010497: plasmodesmata-mediated intercellular transport1.23E-02
168GO:0000910: cytokinesis1.30E-02
169GO:0000902: cell morphogenesis1.40E-02
170GO:0009051: pentose-phosphate shunt, oxidative branch1.40E-02
171GO:0080144: amino acid homeostasis1.40E-02
172GO:0006098: pentose-phosphate shunt1.40E-02
173GO:0009638: phototropism1.58E-02
174GO:2000280: regulation of root development1.58E-02
175GO:1900865: chloroplast RNA modification1.58E-02
176GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.58E-02
177GO:0031425: chloroplast RNA processing1.58E-02
178GO:0030422: production of siRNA involved in RNA interference1.76E-02
179GO:0006298: mismatch repair1.76E-02
180GO:0006259: DNA metabolic process1.76E-02
181GO:0006535: cysteine biosynthetic process from serine1.76E-02
182GO:0080167: response to karrikin1.81E-02
183GO:0048229: gametophyte development1.95E-02
184GO:0006265: DNA topological change1.95E-02
185GO:0009089: lysine biosynthetic process via diaminopimelate1.95E-02
186GO:0006816: calcium ion transport1.95E-02
187GO:0009773: photosynthetic electron transport in photosystem I1.95E-02
188GO:0045037: protein import into chloroplast stroma2.15E-02
189GO:0010582: floral meristem determinacy2.15E-02
190GO:0016024: CDP-diacylglycerol biosynthetic process2.15E-02
191GO:0009691: cytokinin biosynthetic process2.36E-02
192GO:0030036: actin cytoskeleton organization2.36E-02
193GO:0050826: response to freezing2.36E-02
194GO:0010075: regulation of meristem growth2.36E-02
195GO:0006094: gluconeogenesis2.36E-02
196GO:0010628: positive regulation of gene expression2.36E-02
197GO:0006006: glucose metabolic process2.36E-02
198GO:0009785: blue light signaling pathway2.36E-02
199GO:0009934: regulation of meristem structural organization2.57E-02
200GO:0010020: chloroplast fission2.57E-02
201GO:0006839: mitochondrial transport2.61E-02
202GO:0009833: plant-type primary cell wall biogenesis3.01E-02
203GO:0006833: water transport3.01E-02
204GO:0019344: cysteine biosynthetic process3.24E-02
205GO:0009116: nucleoside metabolic process3.24E-02
206GO:0009944: polarity specification of adaxial/abaxial axis3.24E-02
207GO:0051017: actin filament bundle assembly3.24E-02
208GO:0030150: protein import into mitochondrial matrix3.24E-02
209GO:0007010: cytoskeleton organization3.24E-02
210GO:0005975: carbohydrate metabolic process3.36E-02
211GO:0048364: root development3.42E-02
212GO:0006855: drug transmembrane transport3.44E-02
213GO:0006825: copper ion transport3.48E-02
214GO:0019953: sexual reproduction3.48E-02
215GO:0043622: cortical microtubule organization3.48E-02
216GO:0009793: embryo development ending in seed dormancy3.62E-02
217GO:0006306: DNA methylation3.72E-02
218GO:0006364: rRNA processing3.97E-02
219GO:0051603: proteolysis involved in cellular protein catabolic process4.11E-02
220GO:0030154: cell differentiation4.18E-02
221GO:0001944: vasculature development4.22E-02
222GO:0009686: gibberellin biosynthetic process4.22E-02
223GO:0006417: regulation of translation4.39E-02
224GO:0010089: xylem development4.48E-02
225GO:0010214: seed coat development4.48E-02
226GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.74E-02
227GO:0008284: positive regulation of cell proliferation4.74E-02
228GO:0048367: shoot system development4.84E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
3GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
4GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
5GO:0004823: leucine-tRNA ligase activity0.00E+00
6GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
7GO:0004056: argininosuccinate lyase activity0.00E+00
8GO:0004812: aminoacyl-tRNA ligase activity9.05E-05
9GO:0009672: auxin:proton symporter activity9.97E-05
10GO:0001872: (1->3)-beta-D-glucan binding1.04E-04
11GO:0010329: auxin efflux transmembrane transporter activity2.33E-04
12GO:0004519: endonuclease activity2.95E-04
13GO:0004176: ATP-dependent peptidase activity5.54E-04
14GO:0010285: L,L-diaminopimelate aminotransferase activity5.83E-04
15GO:0052381: tRNA dimethylallyltransferase activity5.83E-04
16GO:0050139: nicotinate-N-glucosyltransferase activity5.83E-04
17GO:0005227: calcium activated cation channel activity5.83E-04
18GO:0051777: ent-kaurenoate oxidase activity5.83E-04
19GO:0042834: peptidoglycan binding5.83E-04
20GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.83E-04
21GO:0004813: alanine-tRNA ligase activity5.83E-04
22GO:0004008: copper-exporting ATPase activity5.83E-04
23GO:0003867: 4-aminobutyrate transaminase activity5.83E-04
24GO:0004832: valine-tRNA ligase activity5.83E-04
25GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.83E-04
26GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.83E-04
27GO:0004830: tryptophan-tRNA ligase activity5.83E-04
28GO:0050017: L-3-cyanoalanine synthase activity1.25E-03
29GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.25E-03
30GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.25E-03
31GO:0003919: FMN adenylyltransferase activity1.25E-03
32GO:0015929: hexosaminidase activity1.25E-03
33GO:0004563: beta-N-acetylhexosaminidase activity1.25E-03
34GO:0004805: trehalose-phosphatase activity1.61E-03
35GO:0070330: aromatase activity2.06E-03
36GO:0002161: aminoacyl-tRNA editing activity2.06E-03
37GO:0005262: calcium channel activity2.43E-03
38GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.75E-03
39GO:0035197: siRNA binding3.00E-03
40GO:0043023: ribosomal large subunit binding3.00E-03
41GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.00E-03
42GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.00E-03
43GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.00E-03
44GO:0003723: RNA binding3.04E-03
45GO:0046556: alpha-L-arabinofuranosidase activity4.04E-03
46GO:0004659: prenyltransferase activity4.04E-03
47GO:0016279: protein-lysine N-methyltransferase activity4.04E-03
48GO:0004845: uracil phosphoribosyltransferase activity4.04E-03
49GO:0004345: glucose-6-phosphate dehydrogenase activity4.04E-03
50GO:0043015: gamma-tubulin binding4.04E-03
51GO:0005253: anion channel activity4.04E-03
52GO:0019199: transmembrane receptor protein kinase activity4.04E-03
53GO:0042277: peptide binding4.04E-03
54GO:0008891: glycolate oxidase activity4.04E-03
55GO:0019843: rRNA binding4.10E-03
56GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.19E-03
57GO:0018685: alkane 1-monooxygenase activity5.19E-03
58GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.68E-03
59GO:0005247: voltage-gated chloride channel activity6.43E-03
60GO:0030983: mismatched DNA binding6.43E-03
61GO:0004605: phosphatidate cytidylyltransferase activity6.43E-03
62GO:0080030: methyl indole-3-acetate esterase activity6.43E-03
63GO:1990714: hydroxyproline O-galactosyltransferase activity6.43E-03
64GO:0004332: fructose-bisphosphate aldolase activity6.43E-03
65GO:0005215: transporter activity6.81E-03
66GO:0004124: cysteine synthase activity7.77E-03
67GO:0008195: phosphatidate phosphatase activity7.77E-03
68GO:0004849: uridine kinase activity7.77E-03
69GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity7.77E-03
70GO:0004656: procollagen-proline 4-dioxygenase activity7.77E-03
71GO:0019899: enzyme binding9.20E-03
72GO:0043022: ribosome binding1.07E-02
73GO:0051015: actin filament binding1.08E-02
74GO:0008237: metallopeptidase activity1.22E-02
75GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.23E-02
76GO:0005375: copper ion transmembrane transporter activity1.23E-02
77GO:0016597: amino acid binding1.30E-02
78GO:0030247: polysaccharide binding1.62E-02
79GO:0015238: drug transmembrane transporter activity1.89E-02
80GO:0008327: methyl-CpG binding1.95E-02
81GO:0004222: metalloendopeptidase activity1.99E-02
82GO:0004252: serine-type endopeptidase activity2.02E-02
83GO:0004521: endoribonuclease activity2.15E-02
84GO:0000049: tRNA binding2.15E-02
85GO:0004089: carbonate dehydratase activity2.36E-02
86GO:0031072: heat shock protein binding2.36E-02
87GO:0009982: pseudouridine synthase activity2.36E-02
88GO:0004565: beta-galactosidase activity2.36E-02
89GO:0015266: protein channel activity2.36E-02
90GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.36E-02
91GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.43E-02
92GO:0004871: signal transducer activity2.53E-02
93GO:0008083: growth factor activity2.57E-02
94GO:0008017: microtubule binding2.81E-02
95GO:0004185: serine-type carboxypeptidase activity2.95E-02
96GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.01E-02
97GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.01E-02
98GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.01E-02
99GO:0043621: protein self-association3.19E-02
100GO:0031418: L-ascorbic acid binding3.24E-02
101GO:0004857: enzyme inhibitor activity3.24E-02
102GO:0005524: ATP binding3.26E-02
103GO:0005345: purine nucleobase transmembrane transporter activity3.48E-02
104GO:0008408: 3'-5' exonuclease activity3.72E-02
105GO:0035251: UDP-glucosyltransferase activity3.72E-02
106GO:0033612: receptor serine/threonine kinase binding3.72E-02
107GO:0003964: RNA-directed DNA polymerase activity3.72E-02
108GO:0016760: cellulose synthase (UDP-forming) activity4.22E-02
109GO:0003727: single-stranded RNA binding4.48E-02
110GO:0047134: protein-disulfide reductase activity4.74E-02
111GO:0004674: protein serine/threonine kinase activity4.86E-02
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Gene type



Gene DE type