Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G06540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900366: negative regulation of defense response to insect0.00E+00
2GO:0016574: histone ubiquitination0.00E+00
3GO:1900424: regulation of defense response to bacterium4.88E-05
4GO:0071076: RNA 3' uridylation4.88E-05
5GO:0007584: response to nutrient1.20E-04
6GO:0071456: cellular response to hypoxia1.63E-04
7GO:0061158: 3'-UTR-mediated mRNA destabilization2.06E-04
8GO:0042752: regulation of circadian rhythm2.70E-04
9GO:0060964: regulation of gene silencing by miRNA3.01E-04
10GO:0010107: potassium ion import4.04E-04
11GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain4.04E-04
12GO:0034440: lipid oxidation4.04E-04
13GO:0009247: glycolipid biosynthetic process5.13E-04
14GO:0010256: endomembrane system organization6.29E-04
15GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity7.50E-04
16GO:0071470: cellular response to osmotic stress7.50E-04
17GO:0030091: protein repair1.01E-03
18GO:0019375: galactolipid biosynthetic process1.01E-03
19GO:0010928: regulation of auxin mediated signaling pathway1.01E-03
20GO:0009056: catabolic process1.28E-03
21GO:0048268: clathrin coat assembly1.43E-03
22GO:0009624: response to nematode1.73E-03
23GO:0012501: programmed cell death1.91E-03
24GO:2000028: regulation of photoperiodism, flowering2.08E-03
25GO:0042343: indole glucosinolate metabolic process2.44E-03
26GO:0034976: response to endoplasmic reticulum stress2.62E-03
27GO:0009863: salicylic acid mediated signaling pathway2.81E-03
28GO:0031408: oxylipin biosynthetic process3.20E-03
29GO:0098542: defense response to other organism3.20E-03
30GO:0048278: vesicle docking3.20E-03
31GO:0010118: stomatal movement4.26E-03
32GO:0042391: regulation of membrane potential4.26E-03
33GO:0048544: recognition of pollen4.71E-03
34GO:0016032: viral process5.42E-03
35GO:0080167: response to karrikin5.63E-03
36GO:0010090: trichome morphogenesis5.66E-03
37GO:0042742: defense response to bacterium5.89E-03
38GO:0009615: response to virus6.67E-03
39GO:0006906: vesicle fusion7.20E-03
40GO:0048573: photoperiodism, flowering7.48E-03
41GO:0009751: response to salicylic acid8.19E-03
42GO:0010311: lateral root formation8.31E-03
43GO:0008152: metabolic process9.16E-03
44GO:0009867: jasmonic acid mediated signaling pathway9.47E-03
45GO:0006897: endocytosis1.07E-02
46GO:0051707: response to other organism1.13E-02
47GO:0000209: protein polyubiquitination1.16E-02
48GO:0006855: drug transmembrane transport1.26E-02
49GO:0006486: protein glycosylation1.40E-02
50GO:0006857: oligopeptide transport1.47E-02
51GO:0035556: intracellular signal transduction1.56E-02
52GO:0018105: peptidyl-serine phosphorylation1.83E-02
53GO:0051726: regulation of cell cycle1.87E-02
54GO:0000398: mRNA splicing, via spliceosome1.99E-02
55GO:0016036: cellular response to phosphate starvation2.52E-02
56GO:0010228: vegetative to reproductive phase transition of meristem2.73E-02
57GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
58GO:0008380: RNA splicing3.00E-02
59GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.42E-02
60GO:0007049: cell cycle3.91E-02
61GO:0009409: response to cold4.05E-02
62GO:0048366: leaf development4.06E-02
63GO:0006810: transport4.39E-02
64GO:0046777: protein autophosphorylation4.41E-02
65GO:0044550: secondary metabolite biosynthetic process4.47E-02
66GO:0045454: cell redox homeostasis4.78E-02
67GO:0006886: intracellular protein transport4.89E-02
RankGO TermAdjusted P value
1GO:1990136: linoleate 9S-lipoxygenase activity4.88E-05
2GO:0046481: digalactosyldiacylglycerol synthase activity4.88E-05
3GO:0050265: RNA uridylyltransferase activity4.88E-05
4GO:0080045: quercetin 3'-O-glucosyltransferase activity1.20E-04
5GO:0048531: beta-1,3-galactosyltransferase activity1.20E-04
6GO:0035250: UDP-galactosyltransferase activity3.01E-04
7GO:0008194: UDP-glycosyltransferase activity3.69E-04
8GO:0003730: mRNA 3'-UTR binding7.50E-04
9GO:0008113: peptide-methionine (S)-S-oxide reductase activity7.50E-04
10GO:0033743: peptide-methionine (R)-S-oxide reductase activity7.50E-04
11GO:0102425: myricetin 3-O-glucosyltransferase activity8.75E-04
12GO:0102360: daphnetin 3-O-glucosyltransferase activity8.75E-04
13GO:0047893: flavonol 3-O-glucosyltransferase activity1.01E-03
14GO:0005267: potassium channel activity1.14E-03
15GO:0080043: quercetin 3-O-glucosyltransferase activity1.58E-03
16GO:0080044: quercetin 7-O-glucosyltransferase activity1.58E-03
17GO:0005545: 1-phosphatidylinositol binding1.59E-03
18GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.26E-03
19GO:0030552: cAMP binding2.44E-03
20GO:0030553: cGMP binding2.44E-03
21GO:0004725: protein tyrosine phosphatase activity2.62E-03
22GO:0005216: ion channel activity3.01E-03
23GO:0035251: UDP-glucosyltransferase activity3.20E-03
24GO:0016779: nucleotidyltransferase activity3.41E-03
25GO:0003756: protein disulfide isomerase activity3.82E-03
26GO:0005249: voltage-gated potassium channel activity4.26E-03
27GO:0030551: cyclic nucleotide binding4.26E-03
28GO:0030276: clathrin binding4.48E-03
29GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity4.48E-03
30GO:0009931: calcium-dependent protein serine/threonine kinase activity7.20E-03
31GO:0004721: phosphoprotein phosphatase activity7.48E-03
32GO:0004683: calmodulin-dependent protein kinase activity7.48E-03
33GO:0015238: drug transmembrane transporter activity8.31E-03
34GO:0004693: cyclin-dependent protein serine/threonine kinase activity8.60E-03
35GO:0030145: manganese ion binding8.88E-03
36GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.88E-03
37GO:0000149: SNARE binding1.01E-02
38GO:0005484: SNAP receptor activity1.13E-02
39GO:0031625: ubiquitin protein ligase binding1.50E-02
40GO:0045735: nutrient reservoir activity1.57E-02
41GO:0005516: calmodulin binding2.23E-02
42GO:0008565: protein transporter activity2.39E-02
43GO:0015297: antiporter activity2.56E-02
44GO:0016757: transferase activity, transferring glycosyl groups2.77E-02
45GO:0005215: transporter activity3.32E-02
46GO:0008168: methyltransferase activity3.52E-02
47GO:0016788: hydrolase activity, acting on ester bonds3.66E-02
48GO:0050660: flavin adenine dinucleotide binding4.01E-02
49GO:0004497: monooxygenase activity4.21E-02
50GO:0061630: ubiquitin protein ligase activity4.36E-02
51GO:0052689: carboxylic ester hydrolase activity4.52E-02
52GO:0043565: sequence-specific DNA binding4.58E-02
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Gene type



Gene DE type