GO Enrichment Analysis of Co-expressed Genes with
AT3G06130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048263: determination of dorsal identity | 0.00E+00 |
| 2 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 3 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 6 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 7 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 8 | GO:0010569: regulation of double-strand break repair via homologous recombination | 5.21E-06 |
| 9 | GO:0042793: transcription from plastid promoter | 1.63E-04 |
| 10 | GO:1905039: carboxylic acid transmembrane transport | 3.40E-04 |
| 11 | GO:1905200: gibberellic acid transmembrane transport | 3.40E-04 |
| 12 | GO:0033206: meiotic cytokinesis | 3.40E-04 |
| 13 | GO:0080112: seed growth | 3.40E-04 |
| 14 | GO:0007093: mitotic cell cycle checkpoint | 3.40E-04 |
| 15 | GO:1903866: palisade mesophyll development | 3.40E-04 |
| 16 | GO:0040008: regulation of growth | 3.48E-04 |
| 17 | GO:0042255: ribosome assembly | 3.64E-04 |
| 18 | GO:0006353: DNA-templated transcription, termination | 3.64E-04 |
| 19 | GO:0048829: root cap development | 7.37E-04 |
| 20 | GO:1900033: negative regulation of trichome patterning | 7.40E-04 |
| 21 | GO:0051304: chromosome separation | 7.40E-04 |
| 22 | GO:0080009: mRNA methylation | 7.40E-04 |
| 23 | GO:1901529: positive regulation of anion channel activity | 7.40E-04 |
| 24 | GO:0048731: system development | 7.40E-04 |
| 25 | GO:2000071: regulation of defense response by callose deposition | 7.40E-04 |
| 26 | GO:0009658: chloroplast organization | 8.32E-04 |
| 27 | GO:0010588: cotyledon vascular tissue pattern formation | 1.10E-03 |
| 28 | GO:0090391: granum assembly | 1.20E-03 |
| 29 | GO:0030029: actin filament-based process | 1.20E-03 |
| 30 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.20E-03 |
| 31 | GO:0009887: animal organ morphogenesis | 1.23E-03 |
| 32 | GO:0080188: RNA-directed DNA methylation | 1.38E-03 |
| 33 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.70E-03 |
| 34 | GO:0006168: adenine salvage | 1.72E-03 |
| 35 | GO:1902290: positive regulation of defense response to oomycetes | 1.72E-03 |
| 36 | GO:0010371: regulation of gibberellin biosynthetic process | 1.72E-03 |
| 37 | GO:0006166: purine ribonucleoside salvage | 1.72E-03 |
| 38 | GO:0007276: gamete generation | 1.72E-03 |
| 39 | GO:0009855: determination of bilateral symmetry | 1.72E-03 |
| 40 | GO:0009416: response to light stimulus | 1.85E-03 |
| 41 | GO:0010073: meristem maintenance | 1.88E-03 |
| 42 | GO:0009451: RNA modification | 1.99E-03 |
| 43 | GO:0003333: amino acid transmembrane transport | 2.06E-03 |
| 44 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.26E-03 |
| 45 | GO:0006808: regulation of nitrogen utilization | 2.31E-03 |
| 46 | GO:0048629: trichome patterning | 2.31E-03 |
| 47 | GO:1900864: mitochondrial RNA modification | 2.31E-03 |
| 48 | GO:0031347: regulation of defense response | 2.60E-03 |
| 49 | GO:0042127: regulation of cell proliferation | 2.68E-03 |
| 50 | GO:0016131: brassinosteroid metabolic process | 2.96E-03 |
| 51 | GO:0044209: AMP salvage | 2.96E-03 |
| 52 | GO:0009733: response to auxin | 3.09E-03 |
| 53 | GO:0010087: phloem or xylem histogenesis | 3.13E-03 |
| 54 | GO:0010305: leaf vascular tissue pattern formation | 3.38E-03 |
| 55 | GO:0003006: developmental process involved in reproduction | 3.65E-03 |
| 56 | GO:0009643: photosynthetic acclimation | 3.65E-03 |
| 57 | GO:0016554: cytidine to uridine editing | 3.65E-03 |
| 58 | GO:0035435: phosphate ion transmembrane transport | 3.65E-03 |
| 59 | GO:0002229: defense response to oomycetes | 4.17E-03 |
| 60 | GO:0009734: auxin-activated signaling pathway | 4.39E-03 |
| 61 | GO:0010014: meristem initiation | 4.40E-03 |
| 62 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 4.40E-03 |
| 63 | GO:0010310: regulation of hydrogen peroxide metabolic process | 4.40E-03 |
| 64 | GO:0080060: integument development | 4.40E-03 |
| 65 | GO:2000033: regulation of seed dormancy process | 4.40E-03 |
| 66 | GO:0010098: suspensor development | 5.19E-03 |
| 67 | GO:0010103: stomatal complex morphogenesis | 5.19E-03 |
| 68 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 5.19E-03 |
| 69 | GO:0006401: RNA catabolic process | 5.19E-03 |
| 70 | GO:0010374: stomatal complex development | 5.19E-03 |
| 71 | GO:0010492: maintenance of shoot apical meristem identity | 6.03E-03 |
| 72 | GO:0052543: callose deposition in cell wall | 6.03E-03 |
| 73 | GO:0048564: photosystem I assembly | 6.03E-03 |
| 74 | GO:0045292: mRNA cis splicing, via spliceosome | 6.03E-03 |
| 75 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 6.03E-03 |
| 76 | GO:0009642: response to light intensity | 6.03E-03 |
| 77 | GO:0046620: regulation of organ growth | 6.03E-03 |
| 78 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 6.03E-03 |
| 79 | GO:0006355: regulation of transcription, DNA-templated | 6.63E-03 |
| 80 | GO:0010052: guard cell differentiation | 6.92E-03 |
| 81 | GO:0007389: pattern specification process | 6.92E-03 |
| 82 | GO:0009880: embryonic pattern specification | 6.92E-03 |
| 83 | GO:0007186: G-protein coupled receptor signaling pathway | 6.92E-03 |
| 84 | GO:0010233: phloem transport | 6.92E-03 |
| 85 | GO:0000373: Group II intron splicing | 7.85E-03 |
| 86 | GO:0048589: developmental growth | 7.85E-03 |
| 87 | GO:0048507: meristem development | 7.85E-03 |
| 88 | GO:0032259: methylation | 8.81E-03 |
| 89 | GO:0016571: histone methylation | 8.82E-03 |
| 90 | GO:0016573: histone acetylation | 8.82E-03 |
| 91 | GO:1900426: positive regulation of defense response to bacterium | 8.82E-03 |
| 92 | GO:1900865: chloroplast RNA modification | 8.82E-03 |
| 93 | GO:0006865: amino acid transport | 9.55E-03 |
| 94 | GO:0006535: cysteine biosynthetic process from serine | 9.84E-03 |
| 95 | GO:0006949: syncytium formation | 9.84E-03 |
| 96 | GO:0009867: jasmonic acid mediated signaling pathway | 1.00E-02 |
| 97 | GO:0006351: transcription, DNA-templated | 1.01E-02 |
| 98 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.09E-02 |
| 99 | GO:0009750: response to fructose | 1.09E-02 |
| 100 | GO:0046856: phosphatidylinositol dephosphorylation | 1.09E-02 |
| 101 | GO:0009682: induced systemic resistance | 1.09E-02 |
| 102 | GO:0015770: sucrose transport | 1.09E-02 |
| 103 | GO:0010152: pollen maturation | 1.20E-02 |
| 104 | GO:0012501: programmed cell death | 1.20E-02 |
| 105 | GO:0010582: floral meristem determinacy | 1.20E-02 |
| 106 | GO:0010075: regulation of meristem growth | 1.31E-02 |
| 107 | GO:0010102: lateral root morphogenesis | 1.31E-02 |
| 108 | GO:0009266: response to temperature stimulus | 1.43E-02 |
| 109 | GO:0048467: gynoecium development | 1.43E-02 |
| 110 | GO:0010020: chloroplast fission | 1.43E-02 |
| 111 | GO:0006270: DNA replication initiation | 1.43E-02 |
| 112 | GO:0009901: anther dehiscence | 1.55E-02 |
| 113 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.67E-02 |
| 114 | GO:0080147: root hair cell development | 1.80E-02 |
| 115 | GO:0019344: cysteine biosynthetic process | 1.80E-02 |
| 116 | GO:0009863: salicylic acid mediated signaling pathway | 1.80E-02 |
| 117 | GO:0006338: chromatin remodeling | 1.80E-02 |
| 118 | GO:0010187: negative regulation of seed germination | 1.80E-02 |
| 119 | GO:0006825: copper ion transport | 1.93E-02 |
| 120 | GO:0006874: cellular calcium ion homeostasis | 1.93E-02 |
| 121 | GO:0010431: seed maturation | 2.07E-02 |
| 122 | GO:0048367: shoot system development | 2.13E-02 |
| 123 | GO:0030245: cellulose catabolic process | 2.21E-02 |
| 124 | GO:0009740: gibberellic acid mediated signaling pathway | 2.34E-02 |
| 125 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.35E-02 |
| 126 | GO:0048443: stamen development | 2.49E-02 |
| 127 | GO:0009624: response to nematode | 2.49E-02 |
| 128 | GO:0006284: base-excision repair | 2.49E-02 |
| 129 | GO:0045893: positive regulation of transcription, DNA-templated | 2.73E-02 |
| 130 | GO:0080022: primary root development | 2.79E-02 |
| 131 | GO:0008033: tRNA processing | 2.79E-02 |
| 132 | GO:0010051: xylem and phloem pattern formation | 2.79E-02 |
| 133 | GO:0010118: stomatal movement | 2.79E-02 |
| 134 | GO:0009741: response to brassinosteroid | 2.94E-02 |
| 135 | GO:0010268: brassinosteroid homeostasis | 2.94E-02 |
| 136 | GO:0071472: cellular response to salt stress | 2.94E-02 |
| 137 | GO:0007165: signal transduction | 3.02E-02 |
| 138 | GO:0007018: microtubule-based movement | 3.10E-02 |
| 139 | GO:0009749: response to glucose | 3.25E-02 |
| 140 | GO:0016042: lipid catabolic process | 3.36E-02 |
| 141 | GO:0009845: seed germination | 3.37E-02 |
| 142 | GO:0080156: mitochondrial mRNA modification | 3.42E-02 |
| 143 | GO:0032502: developmental process | 3.58E-02 |
| 144 | GO:0009790: embryo development | 3.63E-02 |
| 145 | GO:0009793: embryo development ending in seed dormancy | 3.67E-02 |
| 146 | GO:0030163: protein catabolic process | 3.75E-02 |
| 147 | GO:0006464: cellular protein modification process | 3.92E-02 |
| 148 | GO:0009828: plant-type cell wall loosening | 3.92E-02 |
| 149 | GO:0019760: glucosinolate metabolic process | 3.92E-02 |
| 150 | GO:0045490: pectin catabolic process | 4.29E-02 |
| 151 | GO:0010027: thylakoid membrane organization | 4.44E-02 |
| 152 | GO:0010029: regulation of seed germination | 4.62E-02 |
| 153 | GO:0009739: response to gibberellin | 4.79E-02 |
| 154 | GO:0007166: cell surface receptor signaling pathway | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 2 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 3 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 4 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 5 | GO:0003723: RNA binding | 3.36E-05 |
| 6 | GO:0008395: steroid hydroxylase activity | 3.40E-04 |
| 7 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 3.40E-04 |
| 8 | GO:0004016: adenylate cyclase activity | 3.40E-04 |
| 9 | GO:1905201: gibberellin transmembrane transporter activity | 3.40E-04 |
| 10 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 3.40E-04 |
| 11 | GO:0004519: endonuclease activity | 7.04E-04 |
| 12 | GO:0042389: omega-3 fatty acid desaturase activity | 7.40E-04 |
| 13 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 7.40E-04 |
| 14 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 7.40E-04 |
| 15 | GO:0003725: double-stranded RNA binding | 1.10E-03 |
| 16 | GO:0016805: dipeptidase activity | 1.20E-03 |
| 17 | GO:0003697: single-stranded DNA binding | 1.47E-03 |
| 18 | GO:0003999: adenine phosphoribosyltransferase activity | 1.72E-03 |
| 19 | GO:0010011: auxin binding | 2.31E-03 |
| 20 | GO:0010328: auxin influx transmembrane transporter activity | 2.31E-03 |
| 21 | GO:0004930: G-protein coupled receptor activity | 2.31E-03 |
| 22 | GO:0030570: pectate lyase activity | 2.46E-03 |
| 23 | GO:0003727: single-stranded RNA binding | 2.68E-03 |
| 24 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 2.78E-03 |
| 25 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.96E-03 |
| 26 | GO:0003690: double-stranded DNA binding | 3.11E-03 |
| 27 | GO:0003677: DNA binding | 3.14E-03 |
| 28 | GO:0008168: methyltransferase activity | 3.54E-03 |
| 29 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 3.65E-03 |
| 30 | GO:0009378: four-way junction helicase activity | 3.65E-03 |
| 31 | GO:0003688: DNA replication origin binding | 3.65E-03 |
| 32 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 3.65E-03 |
| 33 | GO:0004124: cysteine synthase activity | 4.40E-03 |
| 34 | GO:0016832: aldehyde-lyase activity | 4.40E-03 |
| 35 | GO:0005200: structural constituent of cytoskeleton | 5.37E-03 |
| 36 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 6.92E-03 |
| 37 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 7.33E-03 |
| 38 | GO:0000989: transcription factor activity, transcription factor binding | 7.85E-03 |
| 39 | GO:0004713: protein tyrosine kinase activity | 9.84E-03 |
| 40 | GO:0003993: acid phosphatase activity | 1.05E-02 |
| 41 | GO:0008515: sucrose transmembrane transporter activity | 1.09E-02 |
| 42 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.09E-02 |
| 43 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.20E-02 |
| 44 | GO:0015114: phosphate ion transmembrane transporter activity | 1.31E-02 |
| 45 | GO:0000175: 3'-5'-exoribonuclease activity | 1.31E-02 |
| 46 | GO:0004674: protein serine/threonine kinase activity | 1.37E-02 |
| 47 | GO:0043621: protein self-association | 1.40E-02 |
| 48 | GO:0015293: symporter activity | 1.45E-02 |
| 49 | GO:0004970: ionotropic glutamate receptor activity | 1.55E-02 |
| 50 | GO:0004190: aspartic-type endopeptidase activity | 1.55E-02 |
| 51 | GO:0051119: sugar transmembrane transporter activity | 1.55E-02 |
| 52 | GO:0005217: intracellular ligand-gated ion channel activity | 1.55E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 1.67E-02 |
| 54 | GO:0003714: transcription corepressor activity | 1.80E-02 |
| 55 | GO:0015171: amino acid transmembrane transporter activity | 1.93E-02 |
| 56 | GO:0004540: ribonuclease activity | 2.07E-02 |
| 57 | GO:0016874: ligase activity | 2.34E-02 |
| 58 | GO:0008810: cellulase activity | 2.35E-02 |
| 59 | GO:0003779: actin binding | 2.42E-02 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 2.43E-02 |
| 61 | GO:0005102: receptor binding | 2.64E-02 |
| 62 | GO:0042803: protein homodimerization activity | 2.85E-02 |
| 63 | GO:0004871: signal transducer activity | 2.85E-02 |
| 64 | GO:0001085: RNA polymerase II transcription factor binding | 2.94E-02 |
| 65 | GO:0010181: FMN binding | 3.10E-02 |
| 66 | GO:0019843: rRNA binding | 3.12E-02 |
| 67 | GO:0019901: protein kinase binding | 3.25E-02 |
| 68 | GO:0048038: quinone binding | 3.42E-02 |
| 69 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.00E-02 |
| 70 | GO:0008237: metallopeptidase activity | 4.09E-02 |