Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G05500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:0010324: membrane invagination0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0010200: response to chitin6.98E-13
8GO:0019725: cellular homeostasis3.07E-06
9GO:0006470: protein dephosphorylation2.78E-05
10GO:0009751: response to salicylic acid3.89E-05
11GO:0009626: plant-type hypersensitive response4.12E-05
12GO:0060548: negative regulation of cell death4.54E-05
13GO:0009266: response to temperature stimulus4.73E-05
14GO:0010225: response to UV-C7.21E-05
15GO:0009759: indole glucosinolate biosynthetic process1.05E-04
16GO:0009737: response to abscisic acid1.65E-04
17GO:0010150: leaf senescence1.74E-04
18GO:1900056: negative regulation of leaf senescence1.90E-04
19GO:0019478: D-amino acid catabolic process2.57E-04
20GO:0006562: proline catabolic process2.57E-04
21GO:0007229: integrin-mediated signaling pathway2.57E-04
22GO:1901183: positive regulation of camalexin biosynthetic process2.57E-04
23GO:0009270: response to humidity2.57E-04
24GO:0050691: regulation of defense response to virus by host2.57E-04
25GO:0051938: L-glutamate import2.57E-04
26GO:0009609: response to symbiotic bacterium2.57E-04
27GO:0010421: hydrogen peroxide-mediated programmed cell death2.57E-04
28GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.27E-04
29GO:0043091: L-arginine import5.68E-04
30GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.68E-04
31GO:0010133: proline catabolic process to glutamate5.68E-04
32GO:0015802: basic amino acid transport5.68E-04
33GO:0010618: aerenchyma formation5.68E-04
34GO:0008361: regulation of cell size6.59E-04
35GO:0046777: protein autophosphorylation6.69E-04
36GO:0009738: abscisic acid-activated signaling pathway7.77E-04
37GO:0007034: vacuolar transport8.40E-04
38GO:0009653: anatomical structure morphogenesis9.22E-04
39GO:0009062: fatty acid catabolic process9.22E-04
40GO:1900140: regulation of seedling development9.22E-04
41GO:0045793: positive regulation of cell size9.22E-04
42GO:0010186: positive regulation of cellular defense response9.22E-04
43GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process9.22E-04
44GO:0035556: intracellular signal transduction9.23E-04
45GO:0006468: protein phosphorylation1.08E-03
46GO:0051707: response to other organism1.22E-03
47GO:0072583: clathrin-dependent endocytosis1.32E-03
48GO:0002679: respiratory burst involved in defense response1.32E-03
49GO:0006537: glutamate biosynthetic process1.32E-03
50GO:0015696: ammonium transport1.32E-03
51GO:0051289: protein homotetramerization1.32E-03
52GO:0048194: Golgi vesicle budding1.32E-03
53GO:0034219: carbohydrate transmembrane transport1.32E-03
54GO:0070301: cellular response to hydrogen peroxide1.32E-03
55GO:0043207: response to external biotic stimulus1.32E-03
56GO:0009617: response to bacterium1.36E-03
57GO:0031348: negative regulation of defense response1.52E-03
58GO:0071456: cellular response to hypoxia1.52E-03
59GO:0009625: response to insect1.65E-03
60GO:1901002: positive regulation of response to salt stress1.76E-03
61GO:0080142: regulation of salicylic acid biosynthetic process1.76E-03
62GO:0046345: abscisic acid catabolic process1.76E-03
63GO:0010483: pollen tube reception1.76E-03
64GO:0009652: thigmotropism1.76E-03
65GO:0045088: regulation of innate immune response1.76E-03
66GO:0072488: ammonium transmembrane transport1.76E-03
67GO:0009651: response to salt stress1.83E-03
68GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.95E-03
69GO:0034052: positive regulation of plant-type hypersensitive response2.25E-03
70GO:0047484: regulation of response to osmotic stress2.77E-03
71GO:0010942: positive regulation of cell death2.77E-03
72GO:0010193: response to ozone2.79E-03
73GO:0018105: peptidyl-serine phosphorylation2.89E-03
74GO:0009414: response to water deprivation3.19E-03
75GO:0009094: L-phenylalanine biosynthetic process3.33E-03
76GO:0042372: phylloquinone biosynthetic process3.33E-03
77GO:0045926: negative regulation of growth3.33E-03
78GO:0009612: response to mechanical stimulus3.33E-03
79GO:0010310: regulation of hydrogen peroxide metabolic process3.33E-03
80GO:0042742: defense response to bacterium3.34E-03
81GO:0045892: negative regulation of transcription, DNA-templated3.78E-03
82GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.93E-03
83GO:0006401: RNA catabolic process3.93E-03
84GO:0010161: red light signaling pathway3.93E-03
85GO:0009610: response to symbiotic fungus3.93E-03
86GO:0043090: amino acid import3.93E-03
87GO:0001666: response to hypoxia4.03E-03
88GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.26E-03
89GO:0009787: regulation of abscisic acid-activated signaling pathway4.56E-03
90GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.56E-03
91GO:0010120: camalexin biosynthetic process5.22E-03
92GO:0030968: endoplasmic reticulum unfolded protein response5.22E-03
93GO:2000031: regulation of salicylic acid mediated signaling pathway5.22E-03
94GO:0010099: regulation of photomorphogenesis5.22E-03
95GO:0009753: response to jasmonic acid5.64E-03
96GO:0051865: protein autoubiquitination5.92E-03
97GO:0090305: nucleic acid phosphodiester bond hydrolysis5.92E-03
98GO:0009835: fruit ripening5.92E-03
99GO:1900426: positive regulation of defense response to bacterium6.64E-03
100GO:0052544: defense response by callose deposition in cell wall8.19E-03
101GO:0009682: induced systemic resistance8.19E-03
102GO:0002213: defense response to insect9.00E-03
103GO:0010105: negative regulation of ethylene-activated signaling pathway9.00E-03
104GO:0012501: programmed cell death9.00E-03
105GO:0009636: response to toxic substance9.66E-03
106GO:0055046: microgametogenesis9.85E-03
107GO:0031347: regulation of defense response1.04E-02
108GO:0002237: response to molecule of bacterial origin1.07E-02
109GO:0006979: response to oxidative stress1.12E-02
110GO:0009809: lignin biosynthetic process1.16E-02
111GO:0006486: protein glycosylation1.16E-02
112GO:0046854: phosphatidylinositol phosphorylation1.16E-02
113GO:0009969: xyloglucan biosynthetic process1.16E-02
114GO:0009611: response to wounding1.25E-02
115GO:0080167: response to karrikin1.28E-02
116GO:0080147: root hair cell development1.35E-02
117GO:0005992: trehalose biosynthetic process1.35E-02
118GO:0009116: nucleoside metabolic process1.35E-02
119GO:0009620: response to fungus1.51E-02
120GO:0003333: amino acid transmembrane transport1.55E-02
121GO:0035428: hexose transmembrane transport1.65E-02
122GO:0016226: iron-sulfur cluster assembly1.65E-02
123GO:2000022: regulation of jasmonic acid mediated signaling pathway1.65E-02
124GO:0009693: ethylene biosynthetic process1.76E-02
125GO:0010118: stomatal movement2.09E-02
126GO:0006629: lipid metabolic process2.10E-02
127GO:0009408: response to heat2.10E-02
128GO:0006662: glycerol ether metabolic process2.20E-02
129GO:0046323: glucose import2.20E-02
130GO:0009646: response to absence of light2.32E-02
131GO:0008654: phospholipid biosynthetic process2.43E-02
132GO:0006635: fatty acid beta-oxidation2.56E-02
133GO:0071554: cell wall organization or biogenesis2.56E-02
134GO:0016032: viral process2.68E-02
135GO:0019760: glucosinolate metabolic process2.93E-02
136GO:0006904: vesicle docking involved in exocytosis3.06E-02
137GO:0051607: defense response to virus3.19E-02
138GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.20E-02
139GO:0007166: cell surface receptor signaling pathway3.27E-02
140GO:0009911: positive regulation of flower development3.32E-02
141GO:0010029: regulation of seed germination3.46E-02
142GO:0009816: defense response to bacterium, incompatible interaction3.46E-02
143GO:0009627: systemic acquired resistance3.59E-02
144GO:0006351: transcription, DNA-templated3.59E-02
145GO:0048573: photoperiodism, flowering3.73E-02
146GO:0008219: cell death4.01E-02
147GO:0009832: plant-type cell wall biogenesis4.16E-02
148GO:0009407: toxin catabolic process4.30E-02
149GO:0010119: regulation of stomatal movement4.45E-02
150GO:0010043: response to zinc ion4.45E-02
151GO:0006865: amino acid transport4.60E-02
152GO:0006970: response to osmotic stress4.75E-02
153GO:0034599: cellular response to oxidative stress4.90E-02
RankGO TermAdjusted P value
1GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0005509: calcium ion binding4.47E-05
4GO:0016301: kinase activity1.92E-04
5GO:0004722: protein serine/threonine phosphatase activity1.96E-04
6GO:0004657: proline dehydrogenase activity2.57E-04
7GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.57E-04
8GO:2001147: camalexin binding2.57E-04
9GO:0031127: alpha-(1,2)-fucosyltransferase activity2.57E-04
10GO:0010179: IAA-Ala conjugate hydrolase activity2.57E-04
11GO:0032050: clathrin heavy chain binding2.57E-04
12GO:0008809: carnitine racemase activity2.57E-04
13GO:2001227: quercitrin binding2.57E-04
14GO:0009931: calcium-dependent protein serine/threonine kinase activity5.45E-04
15GO:0004683: calmodulin-dependent protein kinase activity5.83E-04
16GO:0043565: sequence-specific DNA binding7.93E-04
17GO:0043424: protein histidine kinase binding1.27E-03
18GO:0015181: arginine transmembrane transporter activity1.32E-03
19GO:0016656: monodehydroascorbate reductase (NADH) activity1.32E-03
20GO:0004165: dodecenoyl-CoA delta-isomerase activity1.32E-03
21GO:0015189: L-lysine transmembrane transporter activity1.32E-03
22GO:0047769: arogenate dehydratase activity1.76E-03
23GO:0004664: prephenate dehydratase activity1.76E-03
24GO:0005313: L-glutamate transmembrane transporter activity1.76E-03
25GO:0005515: protein binding1.80E-03
26GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.25E-03
27GO:0010294: abscisic acid glucosyltransferase activity2.25E-03
28GO:0019901: protein kinase binding2.61E-03
29GO:0008519: ammonium transmembrane transporter activity2.77E-03
30GO:0004605: phosphatidate cytidylyltransferase activity2.77E-03
31GO:0004012: phospholipid-translocating ATPase activity3.33E-03
32GO:0004656: procollagen-proline 4-dioxygenase activity3.33E-03
33GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.59E-03
34GO:0043295: glutathione binding3.93E-03
35GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.93E-03
36GO:0005544: calcium-dependent phospholipid binding4.56E-03
37GO:0052747: sinapyl alcohol dehydrogenase activity4.56E-03
38GO:0004714: transmembrane receptor protein tyrosine kinase activity4.56E-03
39GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.56E-03
40GO:0004721: phosphoprotein phosphatase activity4.74E-03
41GO:0004806: triglyceride lipase activity4.74E-03
42GO:0005524: ATP binding5.06E-03
43GO:0004430: 1-phosphatidylinositol 4-kinase activity5.22E-03
44GO:0008417: fucosyltransferase activity5.92E-03
45GO:0047617: acyl-CoA hydrolase activity6.64E-03
46GO:0015174: basic amino acid transmembrane transporter activity6.64E-03
47GO:0004672: protein kinase activity7.10E-03
48GO:0004712: protein serine/threonine/tyrosine kinase activity7.27E-03
49GO:0004805: trehalose-phosphatase activity7.40E-03
50GO:0005543: phospholipid binding8.19E-03
51GO:0045551: cinnamyl-alcohol dehydrogenase activity9.00E-03
52GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.85E-03
53GO:0051119: sugar transmembrane transporter activity1.16E-02
54GO:0004190: aspartic-type endopeptidase activity1.16E-02
55GO:0016298: lipase activity1.20E-02
56GO:0015171: amino acid transmembrane transporter activity1.29E-02
57GO:0031418: L-ascorbic acid binding1.35E-02
58GO:0004707: MAP kinase activity1.55E-02
59GO:0033612: receptor serine/threonine kinase binding1.55E-02
60GO:0016740: transferase activity1.63E-02
61GO:0015035: protein disulfide oxidoreductase activity1.70E-02
62GO:0004842: ubiquitin-protein transferase activity1.92E-02
63GO:0047134: protein-disulfide reductase activity1.97E-02
64GO:0005516: calmodulin binding2.23E-02
65GO:0005355: glucose transmembrane transporter activity2.32E-02
66GO:0004791: thioredoxin-disulfide reductase activity2.32E-02
67GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.67E-02
68GO:0004518: nuclease activity2.68E-02
69GO:0004197: cysteine-type endopeptidase activity2.68E-02
70GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.80E-02
71GO:0004674: protein serine/threonine kinase activity2.98E-02
72GO:0008237: metallopeptidase activity3.06E-02
73GO:0016597: amino acid binding3.19E-02
74GO:0016413: O-acetyltransferase activity3.19E-02
75GO:0044212: transcription regulatory region DNA binding3.45E-02
76GO:0042802: identical protein binding3.64E-02
77GO:0046982: protein heterodimerization activity4.34E-02
78GO:0050897: cobalt ion binding4.45E-02
79GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.75E-02
80GO:0000987: core promoter proximal region sequence-specific DNA binding4.90E-02
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Gene type



Gene DE type