GO Enrichment Analysis of Co-expressed Genes with
AT3G04670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035725: sodium ion transmembrane transport | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0072722: response to amitrole | 0.00E+00 |
| 4 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 5 | GO:0006858: extracellular transport | 0.00E+00 |
| 6 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 7 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 8 | GO:0006623: protein targeting to vacuole | 1.46E-04 |
| 9 | GO:0032107: regulation of response to nutrient levels | 1.91E-04 |
| 10 | GO:0035266: meristem growth | 1.91E-04 |
| 11 | GO:0016337: single organismal cell-cell adhesion | 1.91E-04 |
| 12 | GO:0007292: female gamete generation | 1.91E-04 |
| 13 | GO:0019628: urate catabolic process | 1.91E-04 |
| 14 | GO:0009623: response to parasitic fungus | 1.91E-04 |
| 15 | GO:0006680: glucosylceramide catabolic process | 1.91E-04 |
| 16 | GO:0042964: thioredoxin reduction | 1.91E-04 |
| 17 | GO:0031338: regulation of vesicle fusion | 1.91E-04 |
| 18 | GO:0060862: negative regulation of floral organ abscission | 1.91E-04 |
| 19 | GO:0006144: purine nucleobase metabolic process | 1.91E-04 |
| 20 | GO:0009615: response to virus | 2.70E-04 |
| 21 | GO:0008202: steroid metabolic process | 2.78E-04 |
| 22 | GO:0006886: intracellular protein transport | 3.98E-04 |
| 23 | GO:0006024: glycosaminoglycan biosynthetic process | 4.29E-04 |
| 24 | GO:0052541: plant-type cell wall cellulose metabolic process | 4.29E-04 |
| 25 | GO:0009727: detection of ethylene stimulus | 4.29E-04 |
| 26 | GO:0051788: response to misfolded protein | 4.29E-04 |
| 27 | GO:0031349: positive regulation of defense response | 4.29E-04 |
| 28 | GO:1902000: homogentisate catabolic process | 4.29E-04 |
| 29 | GO:1901703: protein localization involved in auxin polar transport | 4.29E-04 |
| 30 | GO:0019725: cellular homeostasis | 4.29E-04 |
| 31 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 4.29E-04 |
| 32 | GO:0043132: NAD transport | 4.29E-04 |
| 33 | GO:0042814: monopolar cell growth | 4.29E-04 |
| 34 | GO:0007034: vacuolar transport | 5.55E-04 |
| 35 | GO:0007031: peroxisome organization | 6.22E-04 |
| 36 | GO:0015031: protein transport | 6.36E-04 |
| 37 | GO:0006511: ubiquitin-dependent protein catabolic process | 6.42E-04 |
| 38 | GO:0090630: activation of GTPase activity | 6.99E-04 |
| 39 | GO:0010351: lithium ion transport | 6.99E-04 |
| 40 | GO:0010186: positive regulation of cellular defense response | 6.99E-04 |
| 41 | GO:0009410: response to xenobiotic stimulus | 6.99E-04 |
| 42 | GO:0010272: response to silver ion | 6.99E-04 |
| 43 | GO:0009072: aromatic amino acid family metabolic process | 6.99E-04 |
| 44 | GO:0060968: regulation of gene silencing | 6.99E-04 |
| 45 | GO:0008333: endosome to lysosome transport | 6.99E-04 |
| 46 | GO:0010253: UDP-rhamnose biosynthetic process | 6.99E-04 |
| 47 | GO:0051176: positive regulation of sulfur metabolic process | 6.99E-04 |
| 48 | GO:0044375: regulation of peroxisome size | 6.99E-04 |
| 49 | GO:0016998: cell wall macromolecule catabolic process | 9.21E-04 |
| 50 | GO:0046686: response to cadmium ion | 9.92E-04 |
| 51 | GO:0015858: nucleoside transport | 9.97E-04 |
| 52 | GO:0070676: intralumenal vesicle formation | 9.97E-04 |
| 53 | GO:0001676: long-chain fatty acid metabolic process | 9.97E-04 |
| 54 | GO:0009814: defense response, incompatible interaction | 1.00E-03 |
| 55 | GO:0071369: cellular response to ethylene stimulus | 1.09E-03 |
| 56 | GO:0042147: retrograde transport, endosome to Golgi | 1.28E-03 |
| 57 | GO:0080037: negative regulation of cytokinin-activated signaling pathway | 1.32E-03 |
| 58 | GO:0060548: negative regulation of cell death | 1.32E-03 |
| 59 | GO:0048638: regulation of developmental growth | 1.32E-03 |
| 60 | GO:0000919: cell plate assembly | 1.32E-03 |
| 61 | GO:0006878: cellular copper ion homeostasis | 1.32E-03 |
| 62 | GO:0006665: sphingolipid metabolic process | 1.68E-03 |
| 63 | GO:2000762: regulation of phenylpropanoid metabolic process | 1.68E-03 |
| 64 | GO:0098719: sodium ion import across plasma membrane | 1.68E-03 |
| 65 | GO:0006564: L-serine biosynthetic process | 1.68E-03 |
| 66 | GO:0045454: cell redox homeostasis | 1.91E-03 |
| 67 | GO:0032502: developmental process | 1.95E-03 |
| 68 | GO:0048827: phyllome development | 2.07E-03 |
| 69 | GO:0048232: male gamete generation | 2.07E-03 |
| 70 | GO:0043248: proteasome assembly | 2.07E-03 |
| 71 | GO:0030163: protein catabolic process | 2.07E-03 |
| 72 | GO:0042176: regulation of protein catabolic process | 2.07E-03 |
| 73 | GO:0010315: auxin efflux | 2.07E-03 |
| 74 | GO:0060918: auxin transport | 2.07E-03 |
| 75 | GO:0003006: developmental process involved in reproduction | 2.07E-03 |
| 76 | GO:0009117: nucleotide metabolic process | 2.07E-03 |
| 77 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 2.07E-03 |
| 78 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.07E-03 |
| 79 | GO:0010942: positive regulation of cell death | 2.07E-03 |
| 80 | GO:0009567: double fertilization forming a zygote and endosperm | 2.21E-03 |
| 81 | GO:0006914: autophagy | 2.21E-03 |
| 82 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.49E-03 |
| 83 | GO:0006694: steroid biosynthetic process | 2.49E-03 |
| 84 | GO:0009610: response to symbiotic fungus | 2.93E-03 |
| 85 | GO:0080027: response to herbivore | 2.93E-03 |
| 86 | GO:0009627: systemic acquired resistance | 2.93E-03 |
| 87 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 2.93E-03 |
| 88 | GO:0055075: potassium ion homeostasis | 3.40E-03 |
| 89 | GO:0006102: isocitrate metabolic process | 3.40E-03 |
| 90 | GO:0009850: auxin metabolic process | 3.40E-03 |
| 91 | GO:0030162: regulation of proteolysis | 3.40E-03 |
| 92 | GO:0010078: maintenance of root meristem identity | 3.40E-03 |
| 93 | GO:0019430: removal of superoxide radicals | 3.88E-03 |
| 94 | GO:0007338: single fertilization | 4.40E-03 |
| 95 | GO:0090333: regulation of stomatal closure | 4.40E-03 |
| 96 | GO:0006099: tricarboxylic acid cycle | 4.52E-03 |
| 97 | GO:0051453: regulation of intracellular pH | 4.93E-03 |
| 98 | GO:0090332: stomatal closure | 4.93E-03 |
| 99 | GO:0048268: clathrin coat assembly | 4.93E-03 |
| 100 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.93E-03 |
| 101 | GO:0006887: exocytosis | 5.13E-03 |
| 102 | GO:0006897: endocytosis | 5.13E-03 |
| 103 | GO:0048829: root cap development | 5.48E-03 |
| 104 | GO:0051555: flavonol biosynthetic process | 5.48E-03 |
| 105 | GO:0006032: chitin catabolic process | 5.48E-03 |
| 106 | GO:0010015: root morphogenesis | 6.06E-03 |
| 107 | GO:0072593: reactive oxygen species metabolic process | 6.06E-03 |
| 108 | GO:0000272: polysaccharide catabolic process | 6.06E-03 |
| 109 | GO:0048229: gametophyte development | 6.06E-03 |
| 110 | GO:0009846: pollen germination | 6.99E-03 |
| 111 | GO:0055046: microgametogenesis | 7.28E-03 |
| 112 | GO:0010102: lateral root morphogenesis | 7.28E-03 |
| 113 | GO:0006807: nitrogen compound metabolic process | 7.28E-03 |
| 114 | GO:0009809: lignin biosynthetic process | 7.50E-03 |
| 115 | GO:0016192: vesicle-mediated transport | 7.87E-03 |
| 116 | GO:0009933: meristem structural organization | 7.91E-03 |
| 117 | GO:0007033: vacuole organization | 8.57E-03 |
| 118 | GO:0009225: nucleotide-sugar metabolic process | 8.57E-03 |
| 119 | GO:0010039: response to iron ion | 8.57E-03 |
| 120 | GO:0090351: seedling development | 8.57E-03 |
| 121 | GO:0055114: oxidation-reduction process | 8.66E-03 |
| 122 | GO:0048316: seed development | 9.17E-03 |
| 123 | GO:0034976: response to endoplasmic reticulum stress | 9.25E-03 |
| 124 | GO:0000027: ribosomal large subunit assembly | 9.94E-03 |
| 125 | GO:0009863: salicylic acid mediated signaling pathway | 9.94E-03 |
| 126 | GO:0080092: regulation of pollen tube growth | 1.21E-02 |
| 127 | GO:0071456: cellular response to hypoxia | 1.21E-02 |
| 128 | GO:0016226: iron-sulfur cluster assembly | 1.21E-02 |
| 129 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.21E-02 |
| 130 | GO:0006012: galactose metabolic process | 1.29E-02 |
| 131 | GO:0042127: regulation of cell proliferation | 1.37E-02 |
| 132 | GO:0009058: biosynthetic process | 1.42E-02 |
| 133 | GO:0010087: phloem or xylem histogenesis | 1.53E-02 |
| 134 | GO:0048868: pollen tube development | 1.62E-02 |
| 135 | GO:0006885: regulation of pH | 1.62E-02 |
| 136 | GO:0006814: sodium ion transport | 1.70E-02 |
| 137 | GO:0048544: recognition of pollen | 1.70E-02 |
| 138 | GO:0055072: iron ion homeostasis | 1.79E-02 |
| 139 | GO:0010183: pollen tube guidance | 1.79E-02 |
| 140 | GO:0010150: leaf senescence | 1.86E-02 |
| 141 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.88E-02 |
| 142 | GO:0010193: response to ozone | 1.88E-02 |
| 143 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.08E-02 |
| 144 | GO:0007166: cell surface receptor signaling pathway | 2.12E-02 |
| 145 | GO:0006904: vesicle docking involved in exocytosis | 2.25E-02 |
| 146 | GO:0071805: potassium ion transmembrane transport | 2.25E-02 |
| 147 | GO:0006906: vesicle fusion | 2.64E-02 |
| 148 | GO:0006950: response to stress | 2.74E-02 |
| 149 | GO:0016049: cell growth | 2.84E-02 |
| 150 | GO:0008219: cell death | 2.95E-02 |
| 151 | GO:0009817: defense response to fungus, incompatible interaction | 2.95E-02 |
| 152 | GO:0010311: lateral root formation | 3.05E-02 |
| 153 | GO:0006499: N-terminal protein myristoylation | 3.16E-02 |
| 154 | GO:0009407: toxin catabolic process | 3.16E-02 |
| 155 | GO:0006811: ion transport | 3.16E-02 |
| 156 | GO:0048527: lateral root development | 3.27E-02 |
| 157 | GO:0055085: transmembrane transport | 3.36E-02 |
| 158 | GO:0009853: photorespiration | 3.49E-02 |
| 159 | GO:0045087: innate immune response | 3.49E-02 |
| 160 | GO:0006839: mitochondrial transport | 3.83E-02 |
| 161 | GO:0006631: fatty acid metabolic process | 3.94E-02 |
| 162 | GO:0009636: response to toxic substance | 4.54E-02 |
| 163 | GO:0009965: leaf morphogenesis | 4.54E-02 |
| 164 | GO:0006869: lipid transport | 4.66E-02 |
| 165 | GO:0031347: regulation of defense response | 4.78E-02 |
| 166 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.78E-02 |
| 167 | GO:0009664: plant-type cell wall organization | 4.90E-02 |
| 168 | GO:0006812: cation transport | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 2 | GO:0018580: nitronate monooxygenase activity | 0.00E+00 |
| 3 | GO:0044610: FMN transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 5 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 1.74E-06 |
| 6 | GO:0016853: isomerase activity | 1.32E-04 |
| 7 | GO:0010179: IAA-Ala conjugate hydrolase activity | 1.91E-04 |
| 8 | GO:0008142: oxysterol binding | 1.91E-04 |
| 9 | GO:0048037: cofactor binding | 1.91E-04 |
| 10 | GO:0004348: glucosylceramidase activity | 1.91E-04 |
| 11 | GO:0015230: FAD transmembrane transporter activity | 1.91E-04 |
| 12 | GO:0019786: Atg8-specific protease activity | 1.91E-04 |
| 13 | GO:0015228: coenzyme A transmembrane transporter activity | 4.29E-04 |
| 14 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 4.29E-04 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.29E-04 |
| 16 | GO:0010280: UDP-L-rhamnose synthase activity | 4.29E-04 |
| 17 | GO:0051724: NAD transporter activity | 4.29E-04 |
| 18 | GO:0032934: sterol binding | 4.29E-04 |
| 19 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.29E-04 |
| 20 | GO:0019779: Atg8 activating enzyme activity | 4.29E-04 |
| 21 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 4.29E-04 |
| 22 | GO:0050736: O-malonyltransferase activity | 4.29E-04 |
| 23 | GO:0051980: iron-nicotianamine transmembrane transporter activity | 4.29E-04 |
| 24 | GO:0004385: guanylate kinase activity | 4.29E-04 |
| 25 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.29E-04 |
| 26 | GO:0008061: chitin binding | 6.22E-04 |
| 27 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 6.99E-04 |
| 28 | GO:0042409: caffeoyl-CoA O-methyltransferase activity | 6.99E-04 |
| 29 | GO:0035251: UDP-glucosyltransferase activity | 9.21E-04 |
| 30 | GO:0004416: hydroxyacylglutathione hydrolase activity | 9.97E-04 |
| 31 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 9.97E-04 |
| 32 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 9.97E-04 |
| 33 | GO:0019776: Atg8 ligase activity | 1.32E-03 |
| 34 | GO:0004301: epoxide hydrolase activity | 1.32E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 1.59E-03 |
| 36 | GO:0080122: AMP transmembrane transporter activity | 1.68E-03 |
| 37 | GO:0017137: Rab GTPase binding | 1.68E-03 |
| 38 | GO:0005496: steroid binding | 1.68E-03 |
| 39 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 2.07E-03 |
| 40 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 2.07E-03 |
| 41 | GO:0036402: proteasome-activating ATPase activity | 2.07E-03 |
| 42 | GO:0015385: sodium:proton antiporter activity | 2.07E-03 |
| 43 | GO:0015081: sodium ion transmembrane transporter activity | 2.07E-03 |
| 44 | GO:0051020: GTPase binding | 2.49E-03 |
| 45 | GO:0015217: ADP transmembrane transporter activity | 2.49E-03 |
| 46 | GO:0102391: decanoate--CoA ligase activity | 2.49E-03 |
| 47 | GO:0005347: ATP transmembrane transporter activity | 2.49E-03 |
| 48 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.93E-03 |
| 49 | GO:0008320: protein transmembrane transporter activity | 2.93E-03 |
| 50 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.40E-03 |
| 51 | GO:0004034: aldose 1-epimerase activity | 3.40E-03 |
| 52 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.40E-03 |
| 53 | GO:0005544: calcium-dependent phospholipid binding | 3.40E-03 |
| 54 | GO:0004033: aldo-keto reductase (NADP) activity | 3.40E-03 |
| 55 | GO:0005096: GTPase activator activity | 3.59E-03 |
| 56 | GO:0071949: FAD binding | 4.40E-03 |
| 57 | GO:0004364: glutathione transferase activity | 5.35E-03 |
| 58 | GO:0030234: enzyme regulator activity | 5.48E-03 |
| 59 | GO:0004568: chitinase activity | 5.48E-03 |
| 60 | GO:0008171: O-methyltransferase activity | 5.48E-03 |
| 61 | GO:0005545: 1-phosphatidylinositol binding | 5.48E-03 |
| 62 | GO:0008047: enzyme activator activity | 5.48E-03 |
| 63 | GO:0004713: protein tyrosine kinase activity | 5.48E-03 |
| 64 | GO:0008559: xenobiotic-transporting ATPase activity | 6.06E-03 |
| 65 | GO:0015386: potassium:proton antiporter activity | 6.06E-03 |
| 66 | GO:0015198: oligopeptide transporter activity | 6.66E-03 |
| 67 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.66E-03 |
| 68 | GO:0051287: NAD binding | 6.74E-03 |
| 69 | GO:0004175: endopeptidase activity | 7.91E-03 |
| 70 | GO:0004190: aspartic-type endopeptidase activity | 8.57E-03 |
| 71 | GO:0017025: TBP-class protein binding | 8.57E-03 |
| 72 | GO:0001046: core promoter sequence-specific DNA binding | 9.94E-03 |
| 73 | GO:0004540: ribonuclease activity | 1.14E-02 |
| 74 | GO:0004298: threonine-type endopeptidase activity | 1.14E-02 |
| 75 | GO:0003756: protein disulfide isomerase activity | 1.37E-02 |
| 76 | GO:0047134: protein-disulfide reductase activity | 1.45E-02 |
| 77 | GO:0005451: monovalent cation:proton antiporter activity | 1.53E-02 |
| 78 | GO:0016757: transferase activity, transferring glycosyl groups | 1.55E-02 |
| 79 | GO:0008565: protein transporter activity | 1.61E-02 |
| 80 | GO:0005199: structural constituent of cell wall | 1.62E-02 |
| 81 | GO:0030276: clathrin binding | 1.62E-02 |
| 82 | GO:0001085: RNA polymerase II transcription factor binding | 1.62E-02 |
| 83 | GO:0015299: solute:proton antiporter activity | 1.70E-02 |
| 84 | GO:0008194: UDP-glycosyltransferase activity | 2.08E-02 |
| 85 | GO:0008237: metallopeptidase activity | 2.25E-02 |
| 86 | GO:0016597: amino acid binding | 2.34E-02 |
| 87 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.36E-02 |
| 88 | GO:0042802: identical protein binding | 2.36E-02 |
| 89 | GO:0051213: dioxygenase activity | 2.44E-02 |
| 90 | GO:0004806: triglyceride lipase activity | 2.74E-02 |
| 91 | GO:0030247: polysaccharide binding | 2.74E-02 |
| 92 | GO:0004601: peroxidase activity | 2.87E-02 |
| 93 | GO:0016740: transferase activity | 3.20E-02 |
| 94 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.27E-02 |
| 95 | GO:0016301: kinase activity | 3.33E-02 |
| 96 | GO:0004497: monooxygenase activity | 3.56E-02 |
| 97 | GO:0030246: carbohydrate binding | 3.62E-02 |
| 98 | GO:0000149: SNARE binding | 3.71E-02 |
| 99 | GO:0005507: copper ion binding | 3.88E-02 |
| 100 | GO:0005484: SNAP receptor activity | 4.18E-02 |