Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045730: respiratory burst0.00E+00
2GO:0009268: response to pH0.00E+00
3GO:0009611: response to wounding2.07E-11
4GO:0009808: lignin metabolic process1.32E-05
5GO:1903507: negative regulation of nucleic acid-templated transcription3.02E-05
6GO:0010200: response to chitin3.15E-05
7GO:0046246: terpene biosynthetic process3.37E-05
8GO:0050691: regulation of defense response to virus by host3.37E-05
9GO:0009753: response to jasmonic acid7.06E-05
10GO:2000022: regulation of jasmonic acid mediated signaling pathway9.77E-05
11GO:0048544: recognition of pollen1.65E-04
12GO:0007231: osmosensory signaling pathway2.18E-04
13GO:0033500: carbohydrate homeostasis2.95E-04
14GO:0016131: brassinosteroid metabolic process3.77E-04
15GO:0006952: defense response3.84E-04
16GO:0080167: response to karrikin4.00E-04
17GO:0009643: photosynthetic acclimation4.63E-04
18GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.53E-04
19GO:0009751: response to salicylic acid6.43E-04
20GO:0098869: cellular oxidant detoxification6.47E-04
21GO:0006744: ubiquinone biosynthetic process6.47E-04
22GO:0031347: regulation of defense response7.10E-04
23GO:0045010: actin nucleation7.44E-04
24GO:0009699: phenylpropanoid biosynthetic process8.45E-04
25GO:0009932: cell tip growth8.45E-04
26GO:0010112: regulation of systemic acquired resistance9.49E-04
27GO:2000280: regulation of root development1.06E-03
28GO:0055062: phosphate ion homeostasis1.17E-03
29GO:0043069: negative regulation of programmed cell death1.17E-03
30GO:0072593: reactive oxygen species metabolic process1.28E-03
31GO:0009698: phenylpropanoid metabolic process1.28E-03
32GO:0018107: peptidyl-threonine phosphorylation1.52E-03
33GO:0009718: anthocyanin-containing compound biosynthetic process1.52E-03
34GO:0034605: cellular response to heat1.65E-03
35GO:0002237: response to molecule of bacterial origin1.65E-03
36GO:0009695: jasmonic acid biosynthetic process2.19E-03
37GO:0016114: terpenoid biosynthetic process2.33E-03
38GO:0048511: rhythmic process2.33E-03
39GO:0009269: response to desiccation2.33E-03
40GO:0040007: growth2.63E-03
41GO:0050832: defense response to fungus2.75E-03
42GO:0006468: protein phosphorylation3.02E-03
43GO:0000271: polysaccharide biosynthetic process3.09E-03
44GO:0042742: defense response to bacterium3.22E-03
45GO:0045489: pectin biosynthetic process3.25E-03
46GO:0009651: response to salt stress3.30E-03
47GO:0032502: developmental process3.93E-03
48GO:0009408: response to heat5.18E-03
49GO:0007568: aging6.40E-03
50GO:0009631: cold acclimation6.40E-03
51GO:0016051: carbohydrate biosynthetic process6.82E-03
52GO:0009737: response to abscisic acid8.39E-03
53GO:0009644: response to high light intensity8.60E-03
54GO:0009416: response to light stimulus9.19E-03
55GO:0009664: plant-type cell wall organization9.54E-03
56GO:0042538: hyperosmotic salinity response9.54E-03
57GO:0009809: lignin biosynthetic process1.00E-02
58GO:0051603: proteolysis involved in cellular protein catabolic process1.03E-02
59GO:0010224: response to UV-B1.03E-02
60GO:0006857: oligopeptide transport1.05E-02
61GO:0045893: positive regulation of transcription, DNA-templated1.06E-02
62GO:0009620: response to fungus1.21E-02
63GO:0006355: regulation of transcription, DNA-templated1.25E-02
64GO:0018105: peptidyl-serine phosphorylation1.31E-02
65GO:0006351: transcription, DNA-templated1.33E-02
66GO:0009742: brassinosteroid mediated signaling pathway1.34E-02
67GO:0009845: seed germination1.59E-02
68GO:0042744: hydrogen peroxide catabolic process1.65E-02
69GO:0016036: cellular response to phosphate starvation1.80E-02
70GO:0006979: response to oxidative stress1.88E-02
71GO:0007166: cell surface receptor signaling pathway2.08E-02
72GO:0009617: response to bacterium2.15E-02
73GO:0009409: response to cold2.53E-02
74GO:0009658: chloroplast organization2.58E-02
75GO:0006970: response to osmotic stress2.72E-02
76GO:0009723: response to ethylene2.87E-02
77GO:0044550: secondary metabolite biosynthetic process3.20E-02
78GO:0055114: oxidation-reduction process3.24E-02
79GO:0045892: negative regulation of transcription, DNA-templated3.46E-02
80GO:0009873: ethylene-activated signaling pathway4.76E-02
81GO:0006357: regulation of transcription from RNA polymerase II promoter4.85E-02
RankGO TermAdjusted P value
1GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity0.00E+00
2GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity0.00E+00
3GO:0005522: profilin binding0.00E+00
4GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
5GO:0080118: brassinosteroid sulfotransferase activity3.37E-05
6GO:0003714: transcription corepressor activity7.06E-05
7GO:1990135: flavonoid sulfotransferase activity8.48E-05
8GO:0001047: core promoter binding8.48E-05
9GO:0046423: allene-oxide cyclase activity1.47E-04
10GO:0033897: ribonuclease T2 activity1.47E-04
11GO:0016174: NAD(P)H oxidase activity1.47E-04
12GO:0035673: oligopeptide transmembrane transporter activity4.63E-04
13GO:0052747: sinapyl alcohol dehydrogenase activity7.44E-04
14GO:0003779: actin binding1.07E-03
15GO:0045551: cinnamyl-alcohol dehydrogenase activity1.40E-03
16GO:0015198: oligopeptide transporter activity1.40E-03
17GO:0004521: endoribonuclease activity1.40E-03
18GO:0008146: sulfotransferase activity1.78E-03
19GO:0030246: carbohydrate binding1.92E-03
20GO:0004540: ribonuclease activity2.33E-03
21GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.48E-03
22GO:0004601: peroxidase activity2.85E-03
23GO:0044212: transcription regulatory region DNA binding3.22E-03
24GO:0004197: cysteine-type endopeptidase activity3.93E-03
25GO:0051015: actin filament binding4.10E-03
26GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.46E-03
27GO:0004672: protein kinase activity5.23E-03
28GO:0020037: heme binding5.73E-03
29GO:0043565: sequence-specific DNA binding6.26E-03
30GO:0008234: cysteine-type peptidase activity1.08E-02
31GO:0016301: kinase activity1.17E-02
32GO:0016758: transferase activity, transferring hexosyl groups1.48E-02
33GO:0005509: calcium ion binding1.72E-02
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.80E-02
35GO:0005506: iron ion binding1.84E-02
36GO:0042802: identical protein binding2.24E-02
37GO:0004674: protein serine/threonine kinase activity2.42E-02
38GO:0043531: ADP binding2.76E-02
39GO:0005524: ATP binding3.05E-02
40GO:0003700: transcription factor activity, sequence-specific DNA binding3.34E-02
41GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.42E-02
42GO:0042803: protein homodimerization activity3.54E-02
43GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.70E-02
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Gene type



Gene DE type