co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G03490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger	0.00E+00
3	GO:0071435: potassium ion export	0.00E+00
4	GO:0035725: sodium ion transmembrane transport	0.00E+00
5	GO:0001881: receptor recycling	0.00E+00
6	GO:0010055: atrichoblast differentiation	0.00E+00
7	GO:0006858: extracellular transport	0.00E+00
8	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
9	GO:0090630: activation of GTPase activity	7.70E-06
10	GO:0031338: regulation of vesicle fusion	2.11E-04
11	GO:0006144: purine nucleobase metabolic process	2.11E-04
12	GO:0032107: regulation of response to nutrient levels	2.11E-04
13	GO:0080120: CAAX-box protein maturation	2.11E-04
14	GO:0071280: cellular response to copper ion	2.11E-04
15	GO:0071586: CAAX-box protein processing	2.11E-04
16	GO:0016337: single organismal cell-cell adhesion	2.11E-04
17	GO:0019628: urate catabolic process	2.11E-04
18	GO:0008202: steroid metabolic process	3.21E-04
19	GO:0009727: detection of ethylene stimulus	4.71E-04
20	GO:1901703: protein localization involved in auxin polar transport	4.71E-04
21	GO:1902000: homogentisate catabolic process	4.71E-04
22	GO:0071457: cellular response to ozone	4.71E-04
23	GO:0019725: cellular homeostasis	4.71E-04
24	GO:0015012: heparan sulfate proteoglycan biosynthetic process	4.71E-04
25	GO:0043132: NAD transport	4.71E-04
26	GO:0042814: monopolar cell growth	4.71E-04
27	GO:0006024: glycosaminoglycan biosynthetic process	4.71E-04
28	GO:0052541: plant-type cell wall cellulose metabolic process	4.71E-04
29	GO:0045454: cell redox homeostasis	4.89E-04
30	GO:0010102: lateral root morphogenesis	5.67E-04
31	GO:0007034: vacuolar transport	6.38E-04
32	GO:0010039: response to iron ion	7.14E-04
33	GO:0008333: endosome to lysosome transport	7.67E-04
34	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.67E-04
35	GO:0051176: positive regulation of sulfur metabolic process	7.67E-04
36	GO:0044375: regulation of peroxisome size	7.67E-04
37	GO:0010351: lithium ion transport	7.67E-04
38	GO:0010186: positive regulation of cellular defense response	7.67E-04
39	GO:0009410: response to xenobiotic stimulus	7.67E-04
40	GO:0009072: aromatic amino acid family metabolic process	7.67E-04
41	GO:0015858: nucleoside transport	1.09E-03
42	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.09E-03
43	GO:0070676: intralumenal vesicle formation	1.09E-03
44	GO:0001676: long-chain fatty acid metabolic process	1.09E-03
45	GO:0006571: tyrosine biosynthetic process	1.09E-03
46	GO:0071484: cellular response to light intensity	1.09E-03
47	GO:0071329: cellular response to sucrose stimulus	1.09E-03
48	GO:0010227: floral organ abscission	1.25E-03
49	GO:0000919: cell plate assembly	1.45E-03
50	GO:1990937: xylan acetylation	1.45E-03
51	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.45E-03
52	GO:0060548: negative regulation of cell death	1.45E-03
53	GO:0048638: regulation of developmental growth	1.45E-03
54	GO:2000762: regulation of phenylpropanoid metabolic process	1.85E-03
55	GO:0098719: sodium ion import across plasma membrane	1.85E-03
56	GO:0006665: sphingolipid metabolic process	1.85E-03
57	GO:0032957: inositol trisphosphate metabolic process	1.85E-03
58	GO:0071493: cellular response to UV-B	1.85E-03
59	GO:0006623: protein targeting to vacuole	1.97E-03
60	GO:0010193: response to ozone	2.10E-03
61	GO:0060918: auxin transport	2.28E-03
62	GO:0003006: developmental process involved in reproduction	2.28E-03
63	GO:0009117: nucleotide metabolic process	2.28E-03
64	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.28E-03
65	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.28E-03
66	GO:0006914: autophagy	2.54E-03
67	GO:0009567: double fertilization forming a zygote and endosperm	2.54E-03
68	GO:0009094: L-phenylalanine biosynthetic process	2.74E-03
69	GO:0006694: steroid biosynthetic process	2.74E-03
70	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.74E-03
71	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.23E-03
72	GO:0009610: response to symbiotic fungus	3.23E-03
73	GO:0030162: regulation of proteolysis	3.74E-03
74	GO:0055075: potassium ion homeostasis	3.74E-03
75	GO:0006102: isocitrate metabolic process	3.74E-03
76	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.74E-03
77	GO:0008219: cell death	3.94E-03
78	GO:0007186: G-protein coupled receptor signaling pathway	4.29E-03
79	GO:0019430: removal of superoxide radicals	4.29E-03
80	GO:0006499: N-terminal protein myristoylation	4.35E-03
81	GO:0090333: regulation of stomatal closure	4.85E-03
82	GO:0007338: single fertilization	4.85E-03
83	GO:0006099: tricarboxylic acid cycle	5.21E-03
84	GO:0051453: regulation of intracellular pH	5.44E-03
85	GO:0090332: stomatal closure	5.44E-03
86	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.44E-03
87	GO:0006887: exocytosis	5.93E-03
88	GO:0072593: reactive oxygen species metabolic process	6.69E-03
89	GO:0048229: gametophyte development	6.69E-03
90	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.36E-03
91	GO:0009785: blue light signaling pathway	8.04E-03
92	GO:0006807: nitrogen compound metabolic process	8.04E-03
93	GO:0055046: microgametogenesis	8.04E-03
94	GO:0009266: response to temperature stimulus	8.75E-03
95	GO:0051603: proteolysis involved in cellular protein catabolic process	8.97E-03
96	GO:0016192: vesicle-mediated transport	9.45E-03
97	GO:0046688: response to copper ion	9.48E-03
98	GO:0070588: calcium ion transmembrane transport	9.48E-03
99	GO:0007033: vacuole organization	9.48E-03
100	GO:0007031: peroxisome organization	9.48E-03
101	GO:0034976: response to endoplasmic reticulum stress	1.02E-02
102	GO:0030150: protein import into mitochondrial matrix	1.10E-02
103	GO:0009863: salicylic acid mediated signaling pathway	1.10E-02
104	GO:0006886: intracellular protein transport	1.16E-02
105	GO:0006511: ubiquitin-dependent protein catabolic process	1.24E-02
106	GO:0016998: cell wall macromolecule catabolic process	1.26E-02
107	GO:0009269: response to desiccation	1.26E-02
108	GO:0009814: defense response, incompatible interaction	1.34E-02
109	GO:0016226: iron-sulfur cluster assembly	1.34E-02
110	GO:0071456: cellular response to hypoxia	1.34E-02
111	GO:0055114: oxidation-reduction process	1.37E-02
112	GO:0009411: response to UV	1.43E-02
113	GO:0071369: cellular response to ethylene stimulus	1.43E-02
114	GO:0006012: galactose metabolic process	1.43E-02
115	GO:0071215: cellular response to abscisic acid stimulus	1.43E-02
116	GO:0046686: response to cadmium ion	1.44E-02
117	GO:0042127: regulation of cell proliferation	1.52E-02
118	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.61E-02
119	GO:0042147: retrograde transport, endosome to Golgi	1.61E-02
120	GO:0009058: biosynthetic process	1.64E-02
121	GO:0008152: metabolic process	1.65E-02
122	GO:0010087: phloem or xylem histogenesis	1.70E-02
123	GO:0006885: regulation of pH	1.79E-02
124	GO:0048868: pollen tube development	1.79E-02
125	GO:0071472: cellular response to salt stress	1.79E-02
126	GO:0006814: sodium ion transport	1.88E-02
127	GO:0009749: response to glucose	1.98E-02
128	GO:0055072: iron ion homeostasis	1.98E-02
129	GO:0006413: translational initiation	2.00E-02
130	GO:0006891: intra-Golgi vesicle-mediated transport	2.08E-02
131	GO:0032502: developmental process	2.18E-02
132	GO:0006904: vesicle docking involved in exocytosis	2.49E-02
133	GO:0071805: potassium ion transmembrane transport	2.49E-02
134	GO:0010027: thylakoid membrane organization	2.70E-02
135	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.81E-02
136	GO:0009738: abscisic acid-activated signaling pathway	2.87E-02
137	GO:0006906: vesicle fusion	2.92E-02
138	GO:0009555: pollen development	2.99E-02
139	GO:0006950: response to stress	3.04E-02
140	GO:0015031: protein transport	3.21E-02
141	GO:0009407: toxin catabolic process	3.50E-02
142	GO:0006811: ion transport	3.50E-02
143	GO:0009834: plant-type secondary cell wall biogenesis	3.50E-02
144	GO:0048527: lateral root development	3.62E-02
145	GO:0010119: regulation of stomatal movement	3.62E-02
146	GO:0009910: negative regulation of flower development	3.62E-02
147	GO:0009853: photorespiration	3.86E-02
148	GO:0035195: gene silencing by miRNA	3.86E-02
149	GO:0034599: cellular response to oxidative stress	3.99E-02
150	GO:0055085: transmembrane transport	4.02E-02
151	GO:0006839: mitochondrial transport	4.24E-02
152	GO:0006897: endocytosis	4.37E-02
153	GO:0006631: fatty acid metabolic process	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0005095: GTPase inhibitor activity	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0044610: FMN transmembrane transporter activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0018580: nitronate monooxygenase activity	0.00E+00
6	GO:0016247: channel regulator activity	0.00E+00
7	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.10E-06
8	GO:0005544: calcium-dependent phospholipid binding	1.78E-04
9	GO:0048037: cofactor binding	2.11E-04
10	GO:0015230: FAD transmembrane transporter activity	2.11E-04
11	GO:0019786: Atg8-specific protease activity	2.11E-04
12	GO:0008142: oxysterol binding	2.22E-04
13	GO:0008794: arsenate reductase (glutaredoxin) activity	4.36E-04
14	GO:0019779: Atg8 activating enzyme activity	4.71E-04
15	GO:0050736: O-malonyltransferase activity	4.71E-04
16	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.71E-04
17	GO:0004385: guanylate kinase activity	4.71E-04
18	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.71E-04
19	GO:0015228: coenzyme A transmembrane transporter activity	4.71E-04
20	GO:0051724: NAD transporter activity	4.71E-04
21	GO:0000774: adenyl-nucleotide exchange factor activity	4.71E-04
22	GO:0032934: sterol binding	4.71E-04
23	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.71E-04
24	GO:0004175: endopeptidase activity	6.38E-04
25	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	7.67E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	7.67E-04
27	GO:0047325: inositol tetrakisphosphate 1-kinase activity	7.67E-04
28	GO:0001664: G-protein coupled receptor binding	7.67E-04
29	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	7.67E-04
30	GO:0051087: chaperone binding	9.63E-04
31	GO:0004298: threonine-type endopeptidase activity	1.05E-03
32	GO:0035251: UDP-glucosyltransferase activity	1.05E-03
33	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.09E-03
34	GO:0051740: ethylene binding	1.09E-03
35	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.09E-03
36	GO:0019776: Atg8 ligase activity	1.45E-03
37	GO:0016004: phospholipase activator activity	1.45E-03
38	GO:0004301: epoxide hydrolase activity	1.45E-03
39	GO:0016853: isomerase activity	1.83E-03
40	GO:0080122: AMP transmembrane transporter activity	1.85E-03
41	GO:0017137: Rab GTPase binding	1.85E-03
42	GO:0000104: succinate dehydrogenase activity	1.85E-03
43	GO:0005496: steroid binding	1.85E-03
44	GO:0004784: superoxide dismutase activity	2.28E-03
45	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.28E-03
46	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.28E-03
47	GO:0015081: sodium ion transmembrane transporter activity	2.28E-03
48	GO:1990538: xylan O-acetyltransferase activity	2.28E-03
49	GO:0015385: sodium:proton antiporter activity	2.39E-03
50	GO:0005347: ATP transmembrane transporter activity	2.74E-03
51	GO:0004656: procollagen-proline 4-dioxygenase activity	2.74E-03
52	GO:0051020: GTPase binding	2.74E-03
53	GO:0015217: ADP transmembrane transporter activity	2.74E-03
54	GO:0051920: peroxiredoxin activity	2.74E-03
55	GO:0102391: decanoate--CoA ligase activity	2.74E-03
56	GO:0008320: protein transmembrane transporter activity	3.23E-03
57	GO:0004467: long-chain fatty acid-CoA ligase activity	3.23E-03
58	GO:0005507: copper ion binding	3.60E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	3.74E-03
60	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.74E-03
61	GO:0016209: antioxidant activity	3.74E-03
62	GO:0004034: aldose 1-epimerase activity	3.74E-03
63	GO:0005096: GTPase activator activity	4.14E-03
64	GO:0008194: UDP-glycosyltransferase activity	4.46E-03
65	GO:0071949: FAD binding	4.85E-03
66	GO:0004673: protein histidine kinase activity	6.06E-03
67	GO:0008047: enzyme activator activity	6.06E-03
68	GO:0004364: glutathione transferase activity	6.17E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	6.69E-03
70	GO:0015386: potassium:proton antiporter activity	6.69E-03
71	GO:0004601: peroxidase activity	6.74E-03
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.36E-03
73	GO:0015198: oligopeptide transporter activity	7.36E-03
74	GO:0015095: magnesium ion transmembrane transporter activity	8.04E-03
75	GO:0000155: phosphorelay sensor kinase activity	8.04E-03
76	GO:0004190: aspartic-type endopeptidase activity	9.48E-03
77	GO:0001046: core promoter sequence-specific DNA binding	1.10E-02
78	GO:0031418: L-ascorbic acid binding	1.10E-02
79	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.13E-02
80	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.13E-02
81	GO:0015035: protein disulfide oxidoreductase activity	1.27E-02
82	GO:0003756: protein disulfide isomerase activity	1.52E-02
83	GO:0005451: monovalent cation:proton antiporter activity	1.70E-02
84	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.77E-02
85	GO:0003713: transcription coactivator activity	1.79E-02
86	GO:0005199: structural constituent of cell wall	1.79E-02
87	GO:0001085: RNA polymerase II transcription factor binding	1.79E-02
88	GO:0015299: solute:proton antiporter activity	1.88E-02
89	GO:0004872: receptor activity	1.98E-02
90	GO:0016757: transferase activity, transferring glycosyl groups	2.04E-02
91	GO:0003743: translation initiation factor activity	2.51E-02
92	GO:0051213: dioxygenase activity	2.70E-02
93	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.73E-02
94	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.04E-02
95	GO:0004806: triglyceride lipase activity	3.04E-02
96	GO:0000287: magnesium ion binding	3.26E-02
97	GO:0004222: metalloendopeptidase activity	3.50E-02
98	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.62E-02
99	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.86E-02
100	GO:0004497: monooxygenase activity	4.11E-02
101	GO:0000149: SNARE binding	4.11E-02
102	GO:0005515: protein binding	4.45E-02
103	GO:0052689: carboxylic ester hydrolase activity	4.53E-02
104	GO:0005484: SNAP receptor activity	4.63E-02
105	GO:0035091: phosphatidylinositol binding	4.89E-02