Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G03440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009312: oligosaccharide biosynthetic process0.00E+00
2GO:0032491: detection of molecule of fungal origin0.00E+00
3GO:0006497: protein lipidation0.00E+00
4GO:0032499: detection of peptidoglycan0.00E+00
5GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
6GO:0006654: phosphatidic acid biosynthetic process0.00E+00
7GO:1902001: fatty acid transmembrane transport0.00E+00
8GO:0006216: cytidine catabolic process0.00E+00
9GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
10GO:0033198: response to ATP0.00E+00
11GO:0006952: defense response2.71E-07
12GO:1902290: positive regulation of defense response to oomycetes3.30E-05
13GO:0002237: response to molecule of bacterial origin6.71E-05
14GO:0046470: phosphatidylcholine metabolic process2.42E-04
15GO:0042391: regulation of membrane potential2.68E-04
16GO:0010045: response to nickel cation3.02E-04
17GO:0019605: butyrate metabolic process3.02E-04
18GO:0006083: acetate metabolic process3.02E-04
19GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.02E-04
20GO:0033306: phytol metabolic process3.02E-04
21GO:1900150: regulation of defense response to fungus3.05E-04
22GO:0009751: response to salicylic acid4.04E-04
23GO:1900426: positive regulation of defense response to bacterium5.34E-04
24GO:0010115: regulation of abscisic acid biosynthetic process6.60E-04
25GO:0051258: protein polymerization6.60E-04
26GO:0060919: auxin influx6.60E-04
27GO:0010042: response to manganese ion6.60E-04
28GO:0010271: regulation of chlorophyll catabolic process6.60E-04
29GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.60E-04
30GO:0010541: acropetal auxin transport6.60E-04
31GO:0071668: plant-type cell wall assembly6.60E-04
32GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.60E-04
33GO:0080181: lateral root branching6.60E-04
34GO:0055088: lipid homeostasis6.60E-04
35GO:0015908: fatty acid transport6.60E-04
36GO:0002240: response to molecule of oomycetes origin6.60E-04
37GO:0009816: defense response to bacterium, incompatible interaction6.78E-04
38GO:0050832: defense response to fungus8.91E-04
39GO:0006468: protein phosphorylation9.34E-04
40GO:0007165: signal transduction9.80E-04
41GO:0034605: cellular response to heat1.04E-03
42GO:1900055: regulation of leaf senescence1.07E-03
43GO:0002230: positive regulation of defense response to virus by host1.07E-03
44GO:0015695: organic cation transport1.07E-03
45GO:0010498: proteasomal protein catabolic process1.07E-03
46GO:0010150: leaf senescence1.47E-03
47GO:0010306: rhamnogalacturonan II biosynthetic process1.53E-03
48GO:0015696: ammonium transport1.53E-03
49GO:0071323: cellular response to chitin1.53E-03
50GO:0042742: defense response to bacterium1.63E-03
51GO:0071219: cellular response to molecule of bacterial origin2.06E-03
52GO:0045227: capsule polysaccharide biosynthetic process2.06E-03
53GO:0045088: regulation of innate immune response2.06E-03
54GO:0072488: ammonium transmembrane transport2.06E-03
55GO:0033358: UDP-L-arabinose biosynthetic process2.06E-03
56GO:0033356: UDP-L-arabinose metabolic process2.06E-03
57GO:0006486: protein glycosylation2.38E-03
58GO:0006097: glyoxylate cycle2.63E-03
59GO:0009229: thiamine diphosphate biosynthetic process2.63E-03
60GO:0009435: NAD biosynthetic process2.63E-03
61GO:0016094: polyprenol biosynthetic process2.63E-03
62GO:0034314: Arp2/3 complex-mediated actin nucleation3.24E-03
63GO:0018258: protein O-linked glycosylation via hydroxyproline3.24E-03
64GO:0009228: thiamine biosynthetic process3.24E-03
65GO:1900425: negative regulation of defense response to bacterium3.24E-03
66GO:0002238: response to molecule of fungal origin3.24E-03
67GO:0006014: D-ribose metabolic process3.24E-03
68GO:0009972: cytidine deamination3.24E-03
69GO:0010405: arabinogalactan protein metabolic process3.24E-03
70GO:0010315: auxin efflux3.24E-03
71GO:0009620: response to fungus3.33E-03
72GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.90E-03
73GO:1900057: positive regulation of leaf senescence4.60E-03
74GO:0010038: response to metal ion4.60E-03
75GO:0071446: cellular response to salicylic acid stimulus4.60E-03
76GO:1900056: negative regulation of leaf senescence4.60E-03
77GO:0009850: auxin metabolic process5.35E-03
78GO:0043068: positive regulation of programmed cell death5.35E-03
79GO:0006102: isocitrate metabolic process5.35E-03
80GO:0016559: peroxisome fission5.35E-03
81GO:0006367: transcription initiation from RNA polymerase II promoter6.13E-03
82GO:0006997: nucleus organization6.13E-03
83GO:0010204: defense response signaling pathway, resistance gene-independent6.13E-03
84GO:2000031: regulation of salicylic acid mediated signaling pathway6.13E-03
85GO:0010208: pollen wall assembly6.13E-03
86GO:0009817: defense response to fungus, incompatible interaction6.61E-03
87GO:0016042: lipid catabolic process6.90E-03
88GO:0010112: regulation of systemic acquired resistance6.95E-03
89GO:0009060: aerobic respiration6.95E-03
90GO:0000902: cell morphogenesis6.95E-03
91GO:0019432: triglyceride biosynthetic process6.95E-03
92GO:0010043: response to zinc ion7.65E-03
93GO:0007568: aging7.65E-03
94GO:0048268: clathrin coat assembly7.80E-03
95GO:0048354: mucilage biosynthetic process involved in seed coat development7.80E-03
96GO:0010380: regulation of chlorophyll biosynthetic process7.80E-03
97GO:0006099: tricarboxylic acid cycle8.77E-03
98GO:0043085: positive regulation of catalytic activity9.63E-03
99GO:0030148: sphingolipid biosynthetic process9.63E-03
100GO:0006816: calcium ion transport9.63E-03
101GO:0009682: induced systemic resistance9.63E-03
102GO:0045037: protein import into chloroplast stroma1.06E-02
103GO:0000266: mitochondrial fission1.06E-02
104GO:0006790: sulfur compound metabolic process1.06E-02
105GO:0012501: programmed cell death1.06E-02
106GO:0051707: response to other organism1.08E-02
107GO:0050826: response to freezing1.16E-02
108GO:0055046: microgametogenesis1.16E-02
109GO:0010102: lateral root morphogenesis1.16E-02
110GO:0007015: actin filament organization1.26E-02
111GO:0010540: basipetal auxin transport1.26E-02
112GO:0070588: calcium ion transmembrane transport1.37E-02
113GO:0046854: phosphatidylinositol phosphorylation1.37E-02
114GO:0010053: root epidermal cell differentiation1.37E-02
115GO:0009225: nucleotide-sugar metabolic process1.37E-02
116GO:0009825: multidimensional cell growth1.37E-02
117GO:0034976: response to endoplasmic reticulum stress1.48E-02
118GO:0080147: root hair cell development1.59E-02
119GO:2000377: regulation of reactive oxygen species metabolic process1.59E-02
120GO:0010073: meristem maintenance1.71E-02
121GO:0016567: protein ubiquitination1.79E-02
122GO:0007005: mitochondrion organization1.95E-02
123GO:0030245: cellulose catabolic process1.95E-02
124GO:0009814: defense response, incompatible interaction1.95E-02
125GO:0006012: galactose metabolic process2.07E-02
126GO:0009561: megagametogenesis2.20E-02
127GO:0010584: pollen exine formation2.20E-02
128GO:0006284: base-excision repair2.20E-02
129GO:0070417: cellular response to cold2.33E-02
130GO:0008033: tRNA processing2.46E-02
131GO:0000413: protein peptidyl-prolyl isomerization2.46E-02
132GO:0071472: cellular response to salt stress2.59E-02
133GO:0048544: recognition of pollen2.73E-02
134GO:0019252: starch biosynthetic process2.87E-02
135GO:0010193: response to ozone3.01E-02
136GO:0009630: gravitropism3.16E-02
137GO:0010090: trichome morphogenesis3.31E-02
138GO:0030163: protein catabolic process3.31E-02
139GO:0006914: autophagy3.46E-02
140GO:0051607: defense response to virus3.76E-02
141GO:0009615: response to virus3.92E-02
142GO:0009739: response to gibberellin4.03E-02
143GO:0006470: protein dephosphorylation4.12E-02
144GO:0007166: cell surface receptor signaling pathway4.12E-02
145GO:0006974: cellular response to DNA damage stimulus4.24E-02
146GO:0006906: vesicle fusion4.24E-02
147GO:0009617: response to bacterium4.30E-02
148GO:0016311: dephosphorylation4.56E-02
149GO:0030244: cellulose biosynthetic process4.73E-02
150GO:0008219: cell death4.73E-02
151GO:0010311: lateral root formation4.90E-02
152GO:0009832: plant-type cell wall biogenesis4.90E-02
153GO:0048767: root hair elongation4.90E-02
RankGO TermAdjusted P value
1GO:0005212: structural constituent of eye lens0.00E+00
2GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
3GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
4GO:0050334: thiaminase activity0.00E+00
5GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
6GO:2001080: chitosan binding0.00E+00
7GO:0034338: short-chain carboxylesterase activity0.00E+00
8GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
9GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
10GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
11GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
12GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
13GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
14GO:0008734: L-aspartate oxidase activity0.00E+00
15GO:0019211: phosphatase activator activity0.00E+00
16GO:0047844: deoxycytidine deaminase activity0.00E+00
17GO:0004630: phospholipase D activity1.16E-05
18GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.16E-05
19GO:0030552: cAMP binding8.03E-05
20GO:0030553: cGMP binding8.03E-05
21GO:0070696: transmembrane receptor protein serine/threonine kinase binding9.36E-05
22GO:0005216: ion channel activity1.29E-04
23GO:0016301: kinase activity2.27E-04
24GO:0005249: voltage-gated potassium channel activity2.68E-04
25GO:0030551: cyclic nucleotide binding2.68E-04
26GO:0047760: butyrate-CoA ligase activity3.02E-04
27GO:0019707: protein-cysteine S-acyltransferase activity3.02E-04
28GO:0015245: fatty acid transporter activity3.02E-04
29GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.02E-04
30GO:0004649: poly(ADP-ribose) glycohydrolase activity3.02E-04
31GO:0003987: acetate-CoA ligase activity3.02E-04
32GO:0045140: inositol phosphoceramide synthase activity6.60E-04
33GO:0004809: tRNA (guanine-N2-)-methyltransferase activity6.60E-04
34GO:0019779: Atg8 activating enzyme activity6.60E-04
35GO:0005388: calcium-transporting ATPase activity9.29E-04
36GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.07E-03
37GO:0000030: mannosyltransferase activity1.07E-03
38GO:0016174: NAD(P)H oxidase activity1.07E-03
39GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.32E-03
40GO:0004674: protein serine/threonine kinase activity1.41E-03
41GO:0010178: IAA-amino acid conjugate hydrolase activity1.53E-03
42GO:0035529: NADH pyrophosphatase activity1.53E-03
43GO:0004449: isocitrate dehydrogenase (NAD+) activity1.53E-03
44GO:0050373: UDP-arabinose 4-epimerase activity2.06E-03
45GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly2.06E-03
46GO:0010328: auxin influx transmembrane transporter activity2.06E-03
47GO:0019199: transmembrane receptor protein kinase activity2.06E-03
48GO:0005102: receptor binding2.44E-03
49GO:0005524: ATP binding2.62E-03
50GO:0002094: polyprenyltransferase activity2.63E-03
51GO:0004623: phospholipase A2 activity2.63E-03
52GO:0005496: steroid binding2.63E-03
53GO:0047631: ADP-ribose diphosphatase activity2.63E-03
54GO:0008725: DNA-3-methyladenine glycosylase activity2.63E-03
55GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.63E-03
56GO:0000210: NAD+ diphosphatase activity3.24E-03
57GO:0016208: AMP binding3.24E-03
58GO:0035252: UDP-xylosyltransferase activity3.24E-03
59GO:0008519: ammonium transmembrane transporter activity3.24E-03
60GO:1990714: hydroxyproline O-galactosyltransferase activity3.24E-03
61GO:0005261: cation channel activity3.90E-03
62GO:0003978: UDP-glucose 4-epimerase activity3.90E-03
63GO:0004144: diacylglycerol O-acyltransferase activity3.90E-03
64GO:0004126: cytidine deaminase activity3.90E-03
65GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.90E-03
66GO:0004747: ribokinase activity3.90E-03
67GO:0008865: fructokinase activity5.35E-03
68GO:0004708: MAP kinase kinase activity5.35E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity5.35E-03
70GO:0004806: triglyceride lipase activity5.97E-03
71GO:0030955: potassium ion binding7.80E-03
72GO:0004743: pyruvate kinase activity7.80E-03
73GO:0005545: 1-phosphatidylinositol binding8.70E-03
74GO:0008559: xenobiotic-transporting ATPase activity9.63E-03
75GO:0008378: galactosyltransferase activity1.06E-02
76GO:0000049: tRNA binding1.06E-02
77GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.16E-02
78GO:0010329: auxin efflux transmembrane transporter activity1.16E-02
79GO:0008061: chitin binding1.37E-02
80GO:0004190: aspartic-type endopeptidase activity1.37E-02
81GO:0016887: ATPase activity1.40E-02
82GO:0008134: transcription factor binding1.59E-02
83GO:0003954: NADH dehydrogenase activity1.59E-02
84GO:0019706: protein-cysteine S-palmitoyltransferase activity1.82E-02
85GO:0008810: cellulase activity2.07E-02
86GO:0004499: N,N-dimethylaniline monooxygenase activity2.20E-02
87GO:0003756: protein disulfide isomerase activity2.20E-02
88GO:0042803: protein homodimerization activity2.29E-02
89GO:0003713: transcription coactivator activity2.59E-02
90GO:0030276: clathrin binding2.59E-02
91GO:0010181: FMN binding2.73E-02
92GO:0004842: ubiquitin-protein transferase activity2.84E-02
93GO:0019901: protein kinase binding2.87E-02
94GO:0004252: serine-type endopeptidase activity2.90E-02
95GO:0005516: calmodulin binding3.14E-02
96GO:0004197: cysteine-type endopeptidase activity3.16E-02
97GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.61E-02
98GO:0008237: metallopeptidase activity3.61E-02
99GO:0005200: structural constituent of cytoskeleton3.61E-02
100GO:0016722: oxidoreductase activity, oxidizing metal ions3.61E-02
101GO:0051213: dioxygenase activity3.92E-02
102GO:0008375: acetylglucosaminyltransferase activity4.24E-02
103GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.56E-02
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Gene type



Gene DE type