co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
2	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
3	GO:0010401: pectic galactan metabolic process	0.00E+00
4	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
5	GO:0006489: dolichyl diphosphate biosynthetic process	0.00E+00
6	GO:0001881: receptor recycling	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0010055: atrichoblast differentiation	0.00E+00
9	GO:0006903: vesicle targeting	0.00E+00
10	GO:0006511: ubiquitin-dependent protein catabolic process	2.63E-09
11	GO:0045454: cell redox homeostasis	1.18E-05
12	GO:0090630: activation of GTPase activity	1.99E-05
13	GO:0006891: intra-Golgi vesicle-mediated transport	4.50E-05
14	GO:0042176: regulation of protein catabolic process	1.76E-04
15	GO:0010227: floral organ abscission	2.66E-04
16	GO:0046686: response to cadmium ion	2.80E-04
17	GO:0042147: retrograde transport, endosome to Golgi	3.32E-04
18	GO:0009623: response to parasitic fungus	3.55E-04
19	GO:0006680: glucosylceramide catabolic process	3.55E-04
20	GO:0031338: regulation of vesicle fusion	3.55E-04
21	GO:0006474: N-terminal protein amino acid acetylation	3.55E-04
22	GO:0042964: thioredoxin reduction	3.55E-04
23	GO:0032107: regulation of response to nutrient levels	3.55E-04
24	GO:0035266: meristem growth	3.55E-04
25	GO:0016337: single organismal cell-cell adhesion	3.55E-04
26	GO:0007292: female gamete generation	3.55E-04
27	GO:0097502: mannosylation	3.55E-04
28	GO:0006623: protein targeting to vacuole	4.90E-04
29	GO:0051603: proteolysis involved in cellular protein catabolic process	5.72E-04
30	GO:0008202: steroid metabolic process	6.73E-04
31	GO:0048569: post-embryonic animal organ development	7.72E-04
32	GO:0052541: plant-type cell wall cellulose metabolic process	7.72E-04
33	GO:0018345: protein palmitoylation	7.72E-04
34	GO:0051788: response to misfolded protein	7.72E-04
35	GO:0019725: cellular homeostasis	7.72E-04
36	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	7.72E-04
37	GO:0051252: regulation of RNA metabolic process	7.72E-04
38	GO:0015012: heparan sulfate proteoglycan biosynthetic process	7.72E-04
39	GO:0043132: NAD transport	7.72E-04
40	GO:0080183: response to photooxidative stress	7.72E-04
41	GO:0046939: nucleotide phosphorylation	7.72E-04
42	GO:0006024: glycosaminoglycan biosynthetic process	7.72E-04
43	GO:0006790: sulfur compound metabolic process	1.03E-03
44	GO:0060968: regulation of gene silencing	1.25E-03
45	GO:0071367: cellular response to brassinosteroid stimulus	1.25E-03
46	GO:0008333: endosome to lysosome transport	1.25E-03
47	GO:0010253: UDP-rhamnose biosynthetic process	1.25E-03
48	GO:0055074: calcium ion homeostasis	1.25E-03
49	GO:0051176: positive regulation of sulfur metabolic process	1.25E-03
50	GO:0044375: regulation of peroxisome size	1.25E-03
51	GO:0045836: positive regulation of meiotic nuclear division	1.25E-03
52	GO:0010186: positive regulation of cellular defense response	1.25E-03
53	GO:0006517: protein deglycosylation	1.25E-03
54	GO:0018342: protein prenylation	1.25E-03
55	GO:0010272: response to silver ion	1.25E-03
56	GO:0010540: basipetal auxin transport	1.31E-03
57	GO:0009225: nucleotide-sugar metabolic process	1.47E-03
58	GO:0046854: phosphatidylinositol phosphorylation	1.47E-03
59	GO:0015031: protein transport	1.56E-03
60	GO:0072334: UDP-galactose transmembrane transport	1.80E-03
61	GO:0006612: protein targeting to membrane	1.80E-03
62	GO:0006893: Golgi to plasma membrane transport	1.80E-03
63	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.80E-03
64	GO:0010104: regulation of ethylene-activated signaling pathway	1.80E-03
65	GO:0015858: nucleoside transport	1.80E-03
66	GO:0000187: activation of MAPK activity	1.80E-03
67	GO:0006874: cellular calcium ion homeostasis	2.00E-03
68	GO:0016998: cell wall macromolecule catabolic process	2.20E-03
69	GO:0009814: defense response, incompatible interaction	2.41E-03
70	GO:0030433: ubiquitin-dependent ERAD pathway	2.41E-03
71	GO:0006536: glutamate metabolic process	2.42E-03
72	GO:1990937: xylan acetylation	2.42E-03
73	GO:0060548: negative regulation of cell death	2.42E-03
74	GO:0033320: UDP-D-xylose biosynthetic process	2.42E-03
75	GO:0071369: cellular response to ethylene stimulus	2.63E-03
76	GO:0045927: positive regulation of growth	3.09E-03
77	GO:0018279: protein N-linked glycosylation via asparagine	3.09E-03
78	GO:0046283: anthocyanin-containing compound metabolic process	3.09E-03
79	GO:0097428: protein maturation by iron-sulfur cluster transfer	3.09E-03
80	GO:0006665: sphingolipid metabolic process	3.09E-03
81	GO:0043248: proteasome assembly	3.82E-03
82	GO:0042732: D-xylose metabolic process	3.82E-03
83	GO:0060918: auxin transport	3.82E-03
84	GO:0003006: developmental process involved in reproduction	3.82E-03
85	GO:0010315: auxin efflux	3.82E-03
86	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.82E-03
87	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	3.82E-03
88	GO:0048827: phyllome development	3.82E-03
89	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.82E-03
90	GO:0048232: male gamete generation	3.82E-03
91	GO:0048544: recognition of pollen	3.88E-03
92	GO:0010183: pollen tube guidance	4.16E-03
93	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.60E-03
94	GO:0048280: vesicle fusion with Golgi apparatus	4.60E-03
95	GO:0009554: megasporogenesis	4.60E-03
96	GO:0030163: protein catabolic process	5.07E-03
97	GO:0006914: autophagy	5.40E-03
98	GO:0009567: double fertilization forming a zygote and endosperm	5.40E-03
99	GO:1900056: negative regulation of leaf senescence	5.44E-03
100	GO:0015937: coenzyme A biosynthetic process	5.44E-03
101	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	5.44E-03
102	GO:0080027: response to herbivore	5.44E-03
103	GO:0010078: maintenance of root meristem identity	6.32E-03
104	GO:0006491: N-glycan processing	6.32E-03
105	GO:2000070: regulation of response to water deprivation	6.32E-03
106	GO:0006102: isocitrate metabolic process	6.32E-03
107	GO:0009615: response to virus	6.44E-03
108	GO:0009627: systemic acquired resistance	7.20E-03
109	GO:0001558: regulation of cell growth	7.25E-03
110	GO:0019430: removal of superoxide radicals	7.25E-03
111	GO:0060321: acceptance of pollen	7.25E-03
112	GO:0007186: G-protein coupled receptor signaling pathway	7.25E-03
113	GO:0009657: plastid organization	7.25E-03
114	GO:0010204: defense response signaling pathway, resistance gene-independent	7.25E-03
115	GO:0006888: ER to Golgi vesicle-mediated transport	7.59E-03
116	GO:0007338: single fertilization	8.22E-03
117	GO:0015780: nucleotide-sugar transport	8.22E-03
118	GO:0042742: defense response to bacterium	8.48E-03
119	GO:0090332: stomatal closure	9.24E-03
120	GO:0048354: mucilage biosynthetic process involved in seed coat development	9.24E-03
121	GO:0006499: N-terminal protein myristoylation	9.29E-03
122	GO:0048527: lateral root development	9.74E-03
123	GO:0051555: flavonol biosynthetic process	1.03E-02
124	GO:0006896: Golgi to vacuole transport	1.03E-02
125	GO:0006032: chitin catabolic process	1.03E-02
126	GO:0048829: root cap development	1.03E-02
127	GO:0006468: protein phosphorylation	1.05E-02
128	GO:0006099: tricarboxylic acid cycle	1.12E-02
129	GO:0072593: reactive oxygen species metabolic process	1.14E-02
130	GO:0043085: positive regulation of catalytic activity	1.14E-02
131	GO:0000272: polysaccharide catabolic process	1.14E-02
132	GO:0010015: root morphogenesis	1.14E-02
133	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.26E-02
134	GO:0008361: regulation of cell size	1.26E-02
135	GO:0010102: lateral root morphogenesis	1.38E-02
136	GO:0006807: nitrogen compound metabolic process	1.38E-02
137	GO:0055046: microgametogenesis	1.38E-02
138	GO:0006541: glutamine metabolic process	1.50E-02
139	GO:0007034: vacuolar transport	1.50E-02
140	GO:0009933: meristem structural organization	1.50E-02
141	GO:0009266: response to temperature stimulus	1.50E-02
142	GO:0007031: peroxisome organization	1.62E-02
143	GO:0010039: response to iron ion	1.62E-02
144	GO:0090351: seedling development	1.62E-02
145	GO:0000165: MAPK cascade	1.68E-02
146	GO:0009664: plant-type cell wall organization	1.74E-02
147	GO:0009846: pollen germination	1.74E-02
148	GO:0034976: response to endoplasmic reticulum stress	1.76E-02
149	GO:0006486: protein glycosylation	1.87E-02
150	GO:0006487: protein N-linked glycosylation	1.89E-02
151	GO:0051302: regulation of cell division	2.03E-02
152	GO:0006417: regulation of translation	2.07E-02
153	GO:0051321: meiotic cell cycle	2.17E-02
154	GO:0048316: seed development	2.28E-02
155	GO:0016226: iron-sulfur cluster assembly	2.31E-02
156	GO:0080092: regulation of pollen tube growth	2.31E-02
157	GO:0071456: cellular response to hypoxia	2.31E-02
158	GO:0071215: cellular response to abscisic acid stimulus	2.46E-02
159	GO:0006012: galactose metabolic process	2.46E-02
160	GO:0042127: regulation of cell proliferation	2.61E-02
161	GO:0009624: response to nematode	2.66E-02
162	GO:0016117: carotenoid biosynthetic process	2.77E-02
163	GO:0008284: positive regulation of cell proliferation	2.77E-02
164	GO:0010051: xylem and phloem pattern formation	2.92E-02
165	GO:0010087: phloem or xylem histogenesis	2.92E-02
166	GO:0010118: stomatal movement	2.92E-02
167	GO:0006886: intracellular protein transport	3.04E-02
168	GO:0006662: glycerol ether metabolic process	3.08E-02
169	GO:0048868: pollen tube development	3.08E-02
170	GO:0055072: iron ion homeostasis	3.41E-02
171	GO:0055085: transmembrane transport	3.49E-02
172	GO:0009058: biosynthetic process	3.51E-02
173	GO:0009651: response to salt stress	3.59E-02
174	GO:0009630: gravitropism	3.75E-02
175	GO:0006464: cellular protein modification process	4.11E-02
176	GO:0006413: translational initiation	4.27E-02
177	GO:0006904: vesicle docking involved in exocytosis	4.29E-02
178	GO:0040008: regulation of growth	4.37E-02
179	GO:0000910: cytokinesis	4.47E-02
180	GO:0016579: protein deubiquitination	4.47E-02
181	GO:0010150: leaf senescence	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity	0.00E+00
3	GO:0000033: alpha-1,3-mannosyltransferase activity	0.00E+00
4	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
7	GO:0044610: FMN transmembrane transporter activity	0.00E+00
8	GO:0008752: FMN reductase activity	0.00E+00
9	GO:0016504: peptidase activator activity	0.00E+00
10	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
11	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
12	GO:0004298: threonine-type endopeptidase activity	2.78E-07
13	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.99E-05
14	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.38E-04
15	GO:0000824: inositol tetrakisphosphate 3-kinase activity	3.55E-04
16	GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	3.55E-04
17	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	3.55E-04
18	GO:0047326: inositol tetrakisphosphate 5-kinase activity	3.55E-04
19	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	3.55E-04
20	GO:0048037: cofactor binding	3.55E-04
21	GO:0000386: second spliceosomal transesterification activity	3.55E-04
22	GO:0051669: fructan beta-fructosidase activity	3.55E-04
23	GO:0004348: glucosylceramidase activity	3.55E-04
24	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	3.55E-04
25	GO:0015230: FAD transmembrane transporter activity	3.55E-04
26	GO:0031219: levanase activity	3.55E-04
27	GO:2001147: camalexin binding	3.55E-04
28	GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity	3.55E-04
29	GO:0019786: Atg8-specific protease activity	3.55E-04
30	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	3.55E-04
31	GO:2001227: quercitrin binding	3.55E-04
32	GO:0004791: thioredoxin-disulfide reductase activity	4.47E-04
33	GO:0016853: isomerase activity	4.47E-04
34	GO:0008142: oxysterol binding	4.76E-04
35	GO:0051724: NAD transporter activity	7.72E-04
36	GO:0008428: ribonuclease inhibitor activity	7.72E-04
37	GO:1990585: hydroxyproline O-arabinosyltransferase activity	7.72E-04
38	GO:0032934: sterol binding	7.72E-04
39	GO:0004775: succinate-CoA ligase (ADP-forming) activity	7.72E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	7.72E-04
41	GO:0019779: Atg8 activating enzyme activity	7.72E-04
42	GO:0050377: UDP-glucose 4,6-dehydratase activity	7.72E-04
43	GO:0008517: folic acid transporter activity	7.72E-04
44	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	7.72E-04
45	GO:0004776: succinate-CoA ligase (GDP-forming) activity	7.72E-04
46	GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity	7.72E-04
47	GO:0004596: peptide alpha-N-acetyltransferase activity	7.72E-04
48	GO:0004566: beta-glucuronidase activity	7.72E-04
49	GO:0015228: coenzyme A transmembrane transporter activity	7.72E-04
50	GO:0008460: dTDP-glucose 4,6-dehydratase activity	7.72E-04
51	GO:0010280: UDP-L-rhamnose synthase activity	7.72E-04
52	GO:0030234: enzyme regulator activity	7.85E-04
53	GO:0008047: enzyme activator activity	7.85E-04
54	GO:0008559: xenobiotic-transporting ATPase activity	9.04E-04
55	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.25E-03
56	GO:0004848: ureidoglycolate hydrolase activity	1.25E-03
57	GO:0005096: GTPase activator activity	1.26E-03
58	GO:0008061: chitin binding	1.47E-03
59	GO:0004970: ionotropic glutamate receptor activity	1.47E-03
60	GO:0005217: intracellular ligand-gated ion channel activity	1.47E-03
61	GO:0004867: serine-type endopeptidase inhibitor activity	1.47E-03
62	GO:0019201: nucleotide kinase activity	1.80E-03
63	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.80E-03
64	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.80E-03
65	GO:0004351: glutamate decarboxylase activity	1.80E-03
66	GO:0070628: proteasome binding	2.42E-03
67	GO:0019776: Atg8 ligase activity	2.42E-03
68	GO:0016004: phospholipase activator activity	2.42E-03
69	GO:0009916: alternative oxidase activity	2.42E-03
70	GO:0004301: epoxide hydrolase activity	2.42E-03
71	GO:0005459: UDP-galactose transmembrane transporter activity	3.09E-03
72	GO:0008948: oxaloacetate decarboxylase activity	3.09E-03
73	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.09E-03
74	GO:0080122: AMP transmembrane transporter activity	3.09E-03
75	GO:0017137: Rab GTPase binding	3.09E-03
76	GO:0000104: succinate dehydrogenase activity	3.09E-03
77	GO:0047134: protein-disulfide reductase activity	3.09E-03
78	GO:1990538: xylan O-acetyltransferase activity	3.82E-03
79	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	3.82E-03
80	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	3.82E-03
81	GO:0036402: proteasome-activating ATPase activity	3.82E-03
82	GO:0048040: UDP-glucuronate decarboxylase activity	3.82E-03
83	GO:0010181: FMN binding	3.88E-03
84	GO:0004601: peroxidase activity	4.15E-03
85	GO:0004017: adenylate kinase activity	4.60E-03
86	GO:0004602: glutathione peroxidase activity	4.60E-03
87	GO:0005347: ATP transmembrane transporter activity	4.60E-03
88	GO:0051020: GTPase binding	4.60E-03
89	GO:0015217: ADP transmembrane transporter activity	4.60E-03
90	GO:0051920: peroxiredoxin activity	4.60E-03
91	GO:0070403: NAD+ binding	4.60E-03
92	GO:0016874: ligase activity	4.70E-03
93	GO:0015035: protein disulfide oxidoreductase activity	5.27E-03
94	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.44E-03
95	GO:0043295: glutathione binding	5.44E-03
96	GO:0008233: peptidase activity	5.61E-03
97	GO:0004034: aldose 1-epimerase activity	6.32E-03
98	GO:0004525: ribonuclease III activity	6.32E-03
99	GO:0005544: calcium-dependent phospholipid binding	6.32E-03
100	GO:0004708: MAP kinase kinase activity	6.32E-03
101	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.32E-03
102	GO:0016209: antioxidant activity	6.32E-03
103	GO:0004568: chitinase activity	1.03E-02
104	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.03E-02
105	GO:0008794: arsenate reductase (glutaredoxin) activity	1.14E-02
106	GO:0008327: methyl-CpG binding	1.14E-02
107	GO:0000149: SNARE binding	1.17E-02
108	GO:0016301: kinase activity	1.22E-02
109	GO:0015198: oligopeptide transporter activity	1.26E-02
110	GO:0004565: beta-galactosidase activity	1.38E-02
111	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.38E-02
112	GO:0005484: SNAP receptor activity	1.38E-02
113	GO:0005524: ATP binding	1.47E-02
114	GO:0004175: endopeptidase activity	1.50E-02
115	GO:0017025: TBP-class protein binding	1.62E-02
116	GO:0001046: core promoter sequence-specific DNA binding	1.89E-02
117	GO:0035251: UDP-glucosyltransferase activity	2.17E-02
118	GO:0004540: ribonuclease activity	2.17E-02
119	GO:0022857: transmembrane transporter activity	2.51E-02
120	GO:0003756: protein disulfide isomerase activity	2.61E-02
121	GO:0003727: single-stranded RNA binding	2.61E-02
122	GO:0003824: catalytic activity	2.90E-02
123	GO:0008080: N-acetyltransferase activity	3.08E-02
124	GO:0001085: RNA polymerase II transcription factor binding	3.08E-02
125	GO:0005199: structural constituent of cell wall	3.08E-02
126	GO:0004872: receptor activity	3.41E-02
127	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.42E-02
128	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.58E-02
129	GO:0030170: pyridoxal phosphate binding	3.69E-02
130	GO:0030246: carbohydrate binding	3.79E-02
131	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.79E-02
132	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.93E-02
133	GO:0009055: electron carrier activity	4.12E-02
134	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.27E-02
135	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.29E-02
136	GO:0008237: metallopeptidase activity	4.29E-02
137	GO:0015297: antiporter activity	4.37E-02