Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006907: pinocytosis0.00E+00
2GO:0009249: protein lipoylation0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
5GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
6GO:0009106: lipoate metabolic process0.00E+00
7GO:0006114: glycerol biosynthetic process0.00E+00
8GO:0090279: regulation of calcium ion import0.00E+00
9GO:0071474: cellular hyperosmotic response0.00E+00
10GO:0010207: photosystem II assembly2.03E-05
11GO:0009395: phospholipid catabolic process1.07E-04
12GO:0071482: cellular response to light stimulus1.72E-04
13GO:0043087: regulation of GTPase activity1.77E-04
14GO:1902458: positive regulation of stomatal opening1.77E-04
15GO:0034337: RNA folding1.77E-04
16GO:0000481: maturation of 5S rRNA1.77E-04
17GO:0015801: aromatic amino acid transport1.77E-04
18GO:0010027: thylakoid membrane organization2.36E-04
19GO:0019684: photosynthesis, light reaction3.42E-04
20GO:0016024: CDP-diacylglycerol biosynthetic process3.93E-04
21GO:1903426: regulation of reactive oxygen species biosynthetic process4.01E-04
22GO:0051262: protein tetramerization4.01E-04
23GO:0006435: threonyl-tRNA aminoacylation4.01E-04
24GO:0035304: regulation of protein dephosphorylation4.01E-04
25GO:0000256: allantoin catabolic process4.01E-04
26GO:0045493: xylan catabolic process6.55E-04
27GO:0046621: negative regulation of organ growth6.55E-04
28GO:0010136: ureide catabolic process6.55E-04
29GO:0044375: regulation of peroxisome size6.55E-04
30GO:2001141: regulation of RNA biosynthetic process9.34E-04
31GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly9.34E-04
32GO:0009102: biotin biosynthetic process9.34E-04
33GO:0006145: purine nucleobase catabolic process9.34E-04
34GO:0006424: glutamyl-tRNA aminoacylation9.34E-04
35GO:0009765: photosynthesis, light harvesting1.24E-03
36GO:0009107: lipoate biosynthetic process1.57E-03
37GO:0016123: xanthophyll biosynthetic process1.57E-03
38GO:0016120: carotene biosynthetic process1.57E-03
39GO:0080110: sporopollenin biosynthetic process1.57E-03
40GO:0032543: mitochondrial translation1.57E-03
41GO:0045038: protein import into chloroplast thylakoid membrane1.57E-03
42GO:0042549: photosystem II stabilization1.94E-03
43GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.94E-03
44GO:0006655: phosphatidylglycerol biosynthetic process1.94E-03
45GO:0030488: tRNA methylation2.32E-03
46GO:0016126: sterol biosynthetic process2.38E-03
47GO:0048437: floral organ development2.74E-03
48GO:0016311: dephosphorylation2.94E-03
49GO:0016559: peroxisome fission3.17E-03
50GO:0007155: cell adhesion3.17E-03
51GO:0042255: ribosome assembly3.17E-03
52GO:0006353: DNA-templated transcription, termination3.17E-03
53GO:0006605: protein targeting3.17E-03
54GO:0032508: DNA duplex unwinding3.17E-03
55GO:2000070: regulation of response to water deprivation3.17E-03
56GO:0017004: cytochrome complex assembly3.63E-03
57GO:0022900: electron transport chain3.63E-03
58GO:0015996: chlorophyll catabolic process3.63E-03
59GO:0007186: G-protein coupled receptor signaling pathway3.63E-03
60GO:0009657: plastid organization3.63E-03
61GO:0009821: alkaloid biosynthetic process4.10E-03
62GO:0051865: protein autoubiquitination4.10E-03
63GO:0010206: photosystem II repair4.10E-03
64GO:0010205: photoinhibition4.60E-03
65GO:0009773: photosynthetic electron transport in photosystem I5.65E-03
66GO:0006415: translational termination5.65E-03
67GO:0009089: lysine biosynthetic process via diaminopimelate5.65E-03
68GO:0006352: DNA-templated transcription, initiation5.65E-03
69GO:0045037: protein import into chloroplast stroma6.20E-03
70GO:0009725: response to hormone6.78E-03
71GO:0010143: cutin biosynthetic process7.37E-03
72GO:0007031: peroxisome organization7.98E-03
73GO:0006418: tRNA aminoacylation for protein translation9.92E-03
74GO:0006396: RNA processing9.95E-03
75GO:0048511: rhythmic process1.06E-02
76GO:0061077: chaperone-mediated protein folding1.06E-02
77GO:0003333: amino acid transmembrane transport1.06E-02
78GO:0016998: cell wall macromolecule catabolic process1.06E-02
79GO:0080092: regulation of pollen tube growth1.13E-02
80GO:0010584: pollen exine formation1.27E-02
81GO:0019722: calcium-mediated signaling1.27E-02
82GO:0009306: protein secretion1.27E-02
83GO:0016117: carotenoid biosynthetic process1.35E-02
84GO:0042335: cuticle development1.43E-02
85GO:0010182: sugar mediated signaling pathway1.50E-02
86GO:0009958: positive gravitropism1.50E-02
87GO:0009451: RNA modification1.71E-02
88GO:0032502: developmental process1.83E-02
89GO:0009735: response to cytokinin1.97E-02
90GO:0007267: cell-cell signaling2.09E-02
91GO:0000910: cytokinesis2.18E-02
92GO:0015995: chlorophyll biosynthetic process2.55E-02
93GO:0010411: xyloglucan metabolic process2.55E-02
94GO:0042254: ribosome biogenesis2.65E-02
95GO:0055114: oxidation-reduction process2.71E-02
96GO:0048481: plant ovule development2.74E-02
97GO:0009813: flavonoid biosynthetic process2.84E-02
98GO:0007568: aging3.04E-02
99GO:0006865: amino acid transport3.14E-02
100GO:0045087: innate immune response3.24E-02
101GO:0015979: photosynthesis3.67E-02
102GO:0006631: fatty acid metabolic process3.67E-02
103GO:0009744: response to sucrose3.88E-02
104GO:0006855: drug transmembrane transport4.33E-02
105GO:0032259: methylation4.53E-02
106GO:0009664: plant-type cell wall organization4.56E-02
107GO:0006364: rRNA processing4.80E-02
RankGO TermAdjusted P value
1GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
2GO:0004076: biotin synthase activity0.00E+00
3GO:0043136: glycerol-3-phosphatase activity0.00E+00
4GO:0000121: glycerol-1-phosphatase activity0.00E+00
5GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0004822: isoleucine-tRNA ligase activity0.00E+00
8GO:0019144: ADP-sugar diphosphatase activity0.00E+00
9GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
10GO:0050613: delta14-sterol reductase activity0.00E+00
11GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
12GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
13GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.77E-05
14GO:0005227: calcium activated cation channel activity1.77E-04
15GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity1.77E-04
16GO:0080042: ADP-glucose pyrophosphohydrolase activity1.77E-04
17GO:0010242: oxygen evolving activity1.77E-04
18GO:0009496: plastoquinol--plastocyanin reductase activity1.77E-04
19GO:0017118: lipoyltransferase activity4.01E-04
20GO:0080041: ADP-ribose pyrophosphohydrolase activity4.01E-04
21GO:0016415: octanoyltransferase activity4.01E-04
22GO:0015173: aromatic amino acid transmembrane transporter activity4.01E-04
23GO:0004829: threonine-tRNA ligase activity4.01E-04
24GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.01E-04
25GO:0003993: acid phosphatase activity4.86E-04
26GO:0008266: poly(U) RNA binding5.04E-04
27GO:0004180: carboxypeptidase activity6.55E-04
28GO:0002161: aminoacyl-tRNA editing activity6.55E-04
29GO:0005504: fatty acid binding6.55E-04
30GO:0003955: NAD(P)H dehydrogenase (quinone) activity6.55E-04
31GO:0005528: FK506 binding6.94E-04
32GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.68E-04
33GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor9.34E-04
34GO:0016851: magnesium chelatase activity9.34E-04
35GO:0016149: translation release factor activity, codon specific9.34E-04
36GO:0046556: alpha-L-arabinofuranosidase activity1.24E-03
37GO:0001053: plastid sigma factor activity1.24E-03
38GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.24E-03
39GO:0016987: sigma factor activity1.24E-03
40GO:0045430: chalcone isomerase activity1.24E-03
41GO:0009044: xylan 1,4-beta-xylosidase activity1.24E-03
42GO:0005275: amine transmembrane transporter activity1.57E-03
43GO:0048038: quinone binding1.65E-03
44GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.94E-03
45GO:0051920: peroxiredoxin activity2.32E-03
46GO:0005261: cation channel activity2.32E-03
47GO:0008236: serine-type peptidase activity2.94E-03
48GO:0016209: antioxidant activity3.17E-03
49GO:0008173: RNA methyltransferase activity3.63E-03
50GO:0003747: translation release factor activity4.10E-03
51GO:0016844: strictosidine synthase activity4.60E-03
52GO:0016788: hydrolase activity, acting on ester bonds5.05E-03
53GO:0051537: 2 iron, 2 sulfur cluster binding5.44E-03
54GO:0035091: phosphatidylinositol binding5.44E-03
55GO:0005089: Rho guanyl-nucleotide exchange factor activity5.65E-03
56GO:0000049: tRNA binding6.20E-03
57GO:0004565: beta-galactosidase activity6.78E-03
58GO:0016491: oxidoreductase activity6.99E-03
59GO:0031624: ubiquitin conjugating enzyme binding7.37E-03
60GO:0030570: pectate lyase activity1.20E-02
61GO:0019843: rRNA binding1.21E-02
62GO:0003727: single-stranded RNA binding1.27E-02
63GO:0004812: aminoacyl-tRNA ligase activity1.35E-02
64GO:0008080: N-acetyltransferase activity1.50E-02
65GO:0050662: coenzyme binding1.58E-02
66GO:0016787: hydrolase activity1.62E-02
67GO:0004872: receptor activity1.66E-02
68GO:0016791: phosphatase activity2.00E-02
69GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.13E-02
70GO:0003723: RNA binding2.53E-02
71GO:0004721: phosphoprotein phosphatase activity2.55E-02
72GO:0004601: peroxidase activity2.60E-02
73GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding2.64E-02
74GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.64E-02
75GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.74E-02
76GO:0005096: GTPase activator activity2.84E-02
77GO:0004222: metalloendopeptidase activity2.94E-02
78GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.04E-02
79GO:0000987: core promoter proximal region sequence-specific DNA binding3.35E-02
80GO:0051539: 4 iron, 4 sulfur cluster binding3.56E-02
81GO:0003735: structural constituent of ribosome4.29E-02
82GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.80E-02
83GO:0003690: double-stranded DNA binding4.92E-02
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Gene type



Gene DE type