GO Enrichment Analysis of Co-expressed Genes with
AT2G46890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033234: negative regulation of protein sumoylation | 0.00E+00 |
| 2 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 3 | GO:0000373: Group II intron splicing | 1.10E-06 |
| 4 | GO:0048598: embryonic morphogenesis | 6.06E-06 |
| 5 | GO:0009967: positive regulation of signal transduction | 1.65E-05 |
| 6 | GO:0006397: mRNA processing | 3.48E-05 |
| 7 | GO:0033169: histone H3-K9 demethylation | 4.72E-05 |
| 8 | GO:0009102: biotin biosynthetic process | 4.72E-05 |
| 9 | GO:0007276: gamete generation | 4.72E-05 |
| 10 | GO:0016973: poly(A)+ mRNA export from nucleus | 8.72E-05 |
| 11 | GO:0007094: mitotic spindle assembly checkpoint | 8.72E-05 |
| 12 | GO:0016123: xanthophyll biosynthetic process | 8.72E-05 |
| 13 | GO:0016120: carotene biosynthetic process | 8.72E-05 |
| 14 | GO:0042793: transcription from plastid promoter | 1.10E-04 |
| 15 | GO:0006401: RNA catabolic process | 1.60E-04 |
| 16 | GO:0006402: mRNA catabolic process | 1.86E-04 |
| 17 | GO:0010492: maintenance of shoot apical meristem identity | 1.86E-04 |
| 18 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.14E-04 |
| 19 | GO:0031425: chloroplast RNA processing | 2.72E-04 |
| 20 | GO:0045036: protein targeting to chloroplast | 3.02E-04 |
| 21 | GO:0016441: posttranscriptional gene silencing | 3.02E-04 |
| 22 | GO:0045037: protein import into chloroplast stroma | 3.65E-04 |
| 23 | GO:0009887: animal organ morphogenesis | 4.30E-04 |
| 24 | GO:0071215: cellular response to abscisic acid stimulus | 6.76E-04 |
| 25 | GO:0042127: regulation of cell proliferation | 7.14E-04 |
| 26 | GO:0048443: stamen development | 7.14E-04 |
| 27 | GO:0008033: tRNA processing | 7.91E-04 |
| 28 | GO:0010501: RNA secondary structure unwinding | 7.91E-04 |
| 29 | GO:0006606: protein import into nucleus | 7.91E-04 |
| 30 | GO:0031047: gene silencing by RNA | 9.90E-04 |
| 31 | GO:0019760: glucosinolate metabolic process | 1.07E-03 |
| 32 | GO:0015995: chlorophyll biosynthetic process | 1.34E-03 |
| 33 | GO:0016311: dephosphorylation | 1.38E-03 |
| 34 | GO:0009910: negative regulation of flower development | 1.57E-03 |
| 35 | GO:0006364: rRNA processing | 2.41E-03 |
| 36 | GO:0030154: cell differentiation | 2.49E-03 |
| 37 | GO:0048367: shoot system development | 2.76E-03 |
| 38 | GO:0009845: seed germination | 3.76E-03 |
| 39 | GO:0016036: cellular response to phosphate starvation | 4.23E-03 |
| 40 | GO:0009451: RNA modification | 4.50E-03 |
| 41 | GO:0009658: chloroplast organization | 5.98E-03 |
| 42 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.11E-03 |
| 43 | GO:0032259: methylation | 8.84E-03 |
| 44 | GO:0048364: root development | 9.38E-03 |
| 45 | GO:0009908: flower development | 1.27E-02 |
| 46 | GO:0009735: response to cytokinin | 1.28E-02 |
| 47 | GO:0045893: positive regulation of transcription, DNA-templated | 1.51E-02 |
| 48 | GO:0006468: protein phosphorylation | 1.76E-02 |
| 49 | GO:0007165: signal transduction | 3.81E-02 |
| 50 | GO:0009793: embryo development ending in seed dormancy | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 2 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 3 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 6.06E-06 |
| 4 | GO:0032454: histone demethylase activity (H3-K9 specific) | 1.65E-05 |
| 5 | GO:0005078: MAP-kinase scaffold activity | 1.65E-05 |
| 6 | GO:0003723: RNA binding | 4.56E-05 |
| 7 | GO:0003724: RNA helicase activity | 2.14E-04 |
| 8 | GO:0005487: nucleocytoplasmic transporter activity | 2.72E-04 |
| 9 | GO:0031490: chromatin DNA binding | 2.72E-04 |
| 10 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 3.65E-04 |
| 11 | GO:0000175: 3'-5'-exoribonuclease activity | 3.97E-04 |
| 12 | GO:0001085: RNA polymerase II transcription factor binding | 8.30E-04 |
| 13 | GO:0004004: ATP-dependent RNA helicase activity | 1.34E-03 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.43E-03 |
| 15 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.57E-03 |
| 16 | GO:0003993: acid phosphatase activity | 1.72E-03 |
| 17 | GO:0003690: double-stranded DNA binding | 2.47E-03 |
| 18 | GO:0008026: ATP-dependent helicase activity | 3.18E-03 |
| 19 | GO:0030170: pyridoxal phosphate binding | 3.82E-03 |
| 20 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.89E-03 |
| 21 | GO:0008168: methyltransferase activity | 5.83E-03 |
| 22 | GO:0000287: magnesium ion binding | 5.91E-03 |
| 23 | GO:0003682: chromatin binding | 6.22E-03 |
| 24 | GO:0004871: signal transducer activity | 8.13E-03 |
| 25 | GO:0004722: protein serine/threonine phosphatase activity | 8.39E-03 |
| 26 | GO:0004519: endonuclease activity | 9.66E-03 |
| 27 | GO:0004674: protein serine/threonine kinase activity | 1.12E-02 |
| 28 | GO:0000166: nucleotide binding | 1.37E-02 |
| 29 | GO:0005524: ATP binding | 1.58E-02 |
| 30 | GO:0004672: protein kinase activity | 2.97E-02 |