Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0072660: maintenance of protein location in plasma membrane0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002376: immune system process0.00E+00
9GO:0033587: shikimate biosynthetic process0.00E+00
10GO:0010200: response to chitin1.82E-14
11GO:0019725: cellular homeostasis2.80E-06
12GO:0031348: negative regulation of defense response4.05E-06
13GO:0009751: response to salicylic acid3.18E-05
14GO:0060548: negative regulation of cell death4.19E-05
15GO:0009266: response to temperature stimulus4.25E-05
16GO:0010225: response to UV-C6.67E-05
17GO:0009759: indole glucosinolate biosynthetic process9.77E-05
18GO:1900056: negative regulation of leaf senescence1.77E-04
19GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.25E-04
20GO:0051938: L-glutamate import2.46E-04
21GO:0051245: negative regulation of cellular defense response2.46E-04
22GO:0010421: hydrogen peroxide-mediated programmed cell death2.46E-04
23GO:0006562: proline catabolic process2.46E-04
24GO:0019478: D-amino acid catabolic process2.46E-04
25GO:0007229: integrin-mediated signaling pathway2.46E-04
26GO:1901183: positive regulation of camalexin biosynthetic process2.46E-04
27GO:0009270: response to humidity2.46E-04
28GO:0050691: regulation of defense response to virus by host2.46E-04
29GO:0009626: plant-type hypersensitive response3.36E-04
30GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.99E-04
31GO:0018105: peptidyl-serine phosphorylation4.27E-04
32GO:0043091: L-arginine import5.44E-04
33GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.44E-04
34GO:0010133: proline catabolic process to glutamate5.44E-04
35GO:0015802: basic amino acid transport5.44E-04
36GO:0010618: aerenchyma formation5.44E-04
37GO:0015865: purine nucleotide transport5.44E-04
38GO:0046777: protein autophosphorylation5.93E-04
39GO:0008361: regulation of cell size6.18E-04
40GO:0007034: vacuolar transport7.88E-04
41GO:0035556: intracellular signal transduction8.06E-04
42GO:0042742: defense response to bacterium8.44E-04
43GO:0045793: positive regulation of cell size8.83E-04
44GO:0072661: protein targeting to plasma membrane8.83E-04
45GO:0010186: positive regulation of cellular defense response8.83E-04
46GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process8.83E-04
47GO:0009653: anatomical structure morphogenesis8.83E-04
48GO:0009062: fatty acid catabolic process8.83E-04
49GO:1900140: regulation of seedling development8.83E-04
50GO:0080147: root hair cell development1.08E-03
51GO:0000187: activation of MAPK activity1.26E-03
52GO:0048194: Golgi vesicle budding1.26E-03
53GO:0034219: carbohydrate transmembrane transport1.26E-03
54GO:0070301: cellular response to hydrogen peroxide1.26E-03
55GO:0046902: regulation of mitochondrial membrane permeability1.26E-03
56GO:0072583: clathrin-dependent endocytosis1.26E-03
57GO:0006537: glutamate biosynthetic process1.26E-03
58GO:0010148: transpiration1.26E-03
59GO:0006612: protein targeting to membrane1.26E-03
60GO:0002679: respiratory burst involved in defense response1.26E-03
61GO:0015696: ammonium transport1.26E-03
62GO:0051289: protein homotetramerization1.26E-03
63GO:0071456: cellular response to hypoxia1.42E-03
64GO:0009737: response to abscisic acid1.45E-03
65GO:0009625: response to insect1.55E-03
66GO:1901141: regulation of lignin biosynthetic process1.68E-03
67GO:0046345: abscisic acid catabolic process1.68E-03
68GO:0010483: pollen tube reception1.68E-03
69GO:0009652: thigmotropism1.68E-03
70GO:1902584: positive regulation of response to water deprivation1.68E-03
71GO:0072488: ammonium transmembrane transport1.68E-03
72GO:0010363: regulation of plant-type hypersensitive response1.68E-03
73GO:0006621: protein retention in ER lumen1.68E-03
74GO:1901002: positive regulation of response to salt stress1.68E-03
75GO:2000038: regulation of stomatal complex development1.68E-03
76GO:0080142: regulation of salicylic acid biosynthetic process1.68E-03
77GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.82E-03
78GO:0045927: positive regulation of growth2.15E-03
79GO:0034052: positive regulation of plant-type hypersensitive response2.15E-03
80GO:0009697: salicylic acid biosynthetic process2.15E-03
81GO:0006952: defense response2.15E-03
82GO:0006468: protein phosphorylation2.17E-03
83GO:0009646: response to absence of light2.27E-03
84GO:0080167: response to karrikin2.52E-03
85GO:0010193: response to ozone2.61E-03
86GO:0010942: positive regulation of cell death2.65E-03
87GO:0047484: regulation of response to osmotic stress2.65E-03
88GO:0009738: abscisic acid-activated signaling pathway2.69E-03
89GO:0006979: response to oxidative stress2.96E-03
90GO:2000037: regulation of stomatal complex patterning3.18E-03
91GO:0010310: regulation of hydrogen peroxide metabolic process3.18E-03
92GO:0034389: lipid particle organization3.18E-03
93GO:0042372: phylloquinone biosynthetic process3.18E-03
94GO:0009094: L-phenylalanine biosynthetic process3.18E-03
95GO:0045926: negative regulation of growth3.18E-03
96GO:0009612: response to mechanical stimulus3.18E-03
97GO:0045892: negative regulation of transcription, DNA-templated3.40E-03
98GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.75E-03
99GO:0010161: red light signaling pathway3.75E-03
100GO:0043090: amino acid import3.75E-03
101GO:0080186: developmental vegetative growth3.75E-03
102GO:0001666: response to hypoxia3.76E-03
103GO:0009651: response to salt stress4.29E-03
104GO:0030968: endoplasmic reticulum unfolded protein response4.98E-03
105GO:2000031: regulation of salicylic acid mediated signaling pathway4.98E-03
106GO:0010099: regulation of photomorphogenesis4.98E-03
107GO:0010120: camalexin biosynthetic process4.98E-03
108GO:0010150: leaf senescence5.12E-03
109GO:0009835: fruit ripening5.65E-03
110GO:0006098: pentose-phosphate shunt5.65E-03
111GO:0051865: protein autoubiquitination5.65E-03
112GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.91E-03
113GO:1900426: positive regulation of defense response to bacterium6.33E-03
114GO:0043069: negative regulation of programmed cell death7.06E-03
115GO:0007064: mitotic sister chromatid cohesion7.06E-03
116GO:0006887: exocytosis7.39E-03
117GO:0009682: induced systemic resistance7.80E-03
118GO:0052544: defense response by callose deposition in cell wall7.80E-03
119GO:0051707: response to other organism8.02E-03
120GO:0012501: programmed cell death8.58E-03
121GO:0002213: defense response to insect8.58E-03
122GO:0010105: negative regulation of ethylene-activated signaling pathway8.58E-03
123GO:0009636: response to toxic substance9.01E-03
124GO:0010229: inflorescence development9.38E-03
125GO:0055046: microgametogenesis9.38E-03
126GO:0009414: response to water deprivation9.38E-03
127GO:0031347: regulation of defense response9.71E-03
128GO:0002237: response to molecule of bacterial origin1.02E-02
129GO:0009809: lignin biosynthetic process1.08E-02
130GO:0006486: protein glycosylation1.08E-02
131GO:0070588: calcium ion transmembrane transport1.11E-02
132GO:0009969: xyloglucan biosynthetic process1.11E-02
133GO:0009611: response to wounding1.13E-02
134GO:0007165: signal transduction1.22E-02
135GO:0016192: vesicle-mediated transport1.25E-02
136GO:0005992: trehalose biosynthetic process1.29E-02
137GO:0009116: nucleoside metabolic process1.29E-02
138GO:0009863: salicylic acid mediated signaling pathway1.29E-02
139GO:0009620: response to fungus1.41E-02
140GO:0019915: lipid storage1.47E-02
141GO:0009269: response to desiccation1.47E-02
142GO:0048278: vesicle docking1.47E-02
143GO:0003333: amino acid transmembrane transport1.47E-02
144GO:0009624: response to nematode1.54E-02
145GO:0009814: defense response, incompatible interaction1.57E-02
146GO:0016226: iron-sulfur cluster assembly1.57E-02
147GO:0035428: hexose transmembrane transport1.57E-02
148GO:2000022: regulation of jasmonic acid mediated signaling pathway1.57E-02
149GO:0010227: floral organ abscission1.67E-02
150GO:0009693: ethylene biosynthetic process1.67E-02
151GO:0070417: cellular response to cold1.88E-02
152GO:0006629: lipid metabolic process1.92E-02
153GO:0000271: polysaccharide biosynthetic process1.99E-02
154GO:0046323: glucose import2.09E-02
155GO:0045489: pectin biosynthetic process2.09E-02
156GO:0009753: response to jasmonic acid2.10E-02
157GO:0061025: membrane fusion2.21E-02
158GO:0008654: phospholipid biosynthetic process2.32E-02
159GO:0050832: defense response to fungus2.40E-02
160GO:0006635: fatty acid beta-oxidation2.43E-02
161GO:0016032: viral process2.55E-02
162GO:0030163: protein catabolic process2.67E-02
163GO:0019760: glucosinolate metabolic process2.79E-02
164GO:0006351: transcription, DNA-templated2.85E-02
165GO:0006904: vesicle docking involved in exocytosis2.91E-02
166GO:0051607: defense response to virus3.04E-02
167GO:0007166: cell surface receptor signaling pathway3.06E-02
168GO:0006470: protein dephosphorylation3.06E-02
169GO:0009911: positive regulation of flower development3.16E-02
170GO:0010468: regulation of gene expression3.19E-02
171GO:0009617: response to bacterium3.19E-02
172GO:0010029: regulation of seed germination3.29E-02
173GO:0009816: defense response to bacterium, incompatible interaction3.29E-02
174GO:0009627: systemic acquired resistance3.42E-02
175GO:0006906: vesicle fusion3.42E-02
176GO:0048573: photoperiodism, flowering3.55E-02
177GO:0008219: cell death3.82E-02
178GO:0009832: plant-type cell wall biogenesis3.96E-02
179GO:0009407: toxin catabolic process4.10E-02
180GO:0010043: response to zinc ion4.24E-02
181GO:0010119: regulation of stomatal movement4.24E-02
182GO:0006865: amino acid transport4.38E-02
183GO:0006970: response to osmotic stress4.44E-02
184GO:0009867: jasmonic acid mediated signaling pathway4.52E-02
185GO:0045087: innate immune response4.52E-02
186GO:0016051: carbohydrate biosynthetic process4.52E-02
RankGO TermAdjusted P value
1GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0005046: KDEL sequence binding0.00E+00
4GO:0005509: calcium ion binding3.51E-05
5GO:0009931: calcium-dependent protein serine/threonine kinase activity4.12E-05
6GO:0004683: calmodulin-dependent protein kinase activity4.57E-05
7GO:0004012: phospholipid-translocating ATPase activity1.34E-04
8GO:0004656: procollagen-proline 4-dioxygenase activity1.34E-04
9GO:0031127: alpha-(1,2)-fucosyltransferase activity2.46E-04
10GO:0010179: IAA-Ala conjugate hydrolase activity2.46E-04
11GO:0032050: clathrin heavy chain binding2.46E-04
12GO:0008809: carnitine racemase activity2.46E-04
13GO:2001227: quercitrin binding2.46E-04
14GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.46E-04
15GO:0015085: calcium ion transmembrane transporter activity2.46E-04
16GO:0004657: proline dehydrogenase activity2.46E-04
17GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.46E-04
18GO:2001147: camalexin binding2.46E-04
19GO:0016301: kinase activity3.59E-04
20GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.73E-04
21GO:0043565: sequence-specific DNA binding6.43E-04
22GO:0005515: protein binding6.69E-04
23GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.00E-04
24GO:0005524: ATP binding1.04E-03
25GO:0043424: protein histidine kinase binding1.19E-03
26GO:0004165: dodecenoyl-CoA delta-isomerase activity1.26E-03
27GO:0015189: L-lysine transmembrane transporter activity1.26E-03
28GO:0015181: arginine transmembrane transporter activity1.26E-03
29GO:0016656: monodehydroascorbate reductase (NADH) activity1.26E-03
30GO:0005516: calmodulin binding1.62E-03
31GO:0047769: arogenate dehydratase activity1.68E-03
32GO:0004664: prephenate dehydratase activity1.68E-03
33GO:0046923: ER retention sequence binding1.68E-03
34GO:0005313: L-glutamate transmembrane transporter activity1.68E-03
35GO:0043495: protein anchor1.68E-03
36GO:0005471: ATP:ADP antiporter activity2.15E-03
37GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.15E-03
38GO:0010294: abscisic acid glucosyltransferase activity2.15E-03
39GO:0008519: ammonium transmembrane transporter activity2.65E-03
40GO:0004605: phosphatidate cytidylyltransferase activity2.65E-03
41GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.75E-03
42GO:0043295: glutathione binding3.75E-03
43GO:0004708: MAP kinase kinase activity4.35E-03
44GO:0004714: transmembrane receptor protein tyrosine kinase activity4.35E-03
45GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.35E-03
46GO:0005544: calcium-dependent phospholipid binding4.35E-03
47GO:0004806: triglyceride lipase activity4.43E-03
48GO:0008417: fucosyltransferase activity5.65E-03
49GO:0004672: protein kinase activity6.20E-03
50GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.21E-03
51GO:0047617: acyl-CoA hydrolase activity6.33E-03
52GO:0015174: basic amino acid transmembrane transporter activity6.33E-03
53GO:0004712: protein serine/threonine/tyrosine kinase activity6.78E-03
54GO:0004805: trehalose-phosphatase activity7.06E-03
55GO:0005543: phospholipid binding7.80E-03
56GO:0005388: calcium-transporting ATPase activity9.38E-03
57GO:0004190: aspartic-type endopeptidase activity1.11E-02
58GO:0051119: sugar transmembrane transporter activity1.11E-02
59GO:0016298: lipase activity1.12E-02
60GO:0015171: amino acid transmembrane transporter activity1.20E-02
61GO:0061630: ubiquitin protein ligase activity1.25E-02
62GO:0031418: L-ascorbic acid binding1.29E-02
63GO:0004707: MAP kinase activity1.47E-02
64GO:0016740: transferase activity1.47E-02
65GO:0033612: receptor serine/threonine kinase binding1.47E-02
66GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.57E-02
67GO:0004842: ubiquitin-protein transferase activity1.71E-02
68GO:0005355: glucose transmembrane transporter activity2.21E-02
69GO:0004872: receptor activity2.32E-02
70GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.49E-02
71GO:0004197: cysteine-type endopeptidase activity2.55E-02
72GO:0008237: metallopeptidase activity2.91E-02
73GO:0016597: amino acid binding3.04E-02
74GO:0016757: transferase activity, transferring glycosyl groups3.09E-02
75GO:0044212: transcription regulatory region DNA binding3.12E-02
76GO:0042802: identical protein binding3.40E-02
77GO:0004721: phosphoprotein phosphatase activity3.55E-02
78GO:0015238: drug transmembrane transporter activity3.96E-02
79GO:0046982: protein heterodimerization activity4.05E-02
80GO:0000287: magnesium ion binding4.05E-02
81GO:0050897: cobalt ion binding4.24E-02
82GO:0003746: translation elongation factor activity4.52E-02
83GO:0043531: ADP binding4.52E-02
84GO:0003700: transcription factor activity, sequence-specific DNA binding4.59E-02
85GO:0000987: core promoter proximal region sequence-specific DNA binding4.66E-02
86GO:0000149: SNARE binding4.81E-02
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Gene type



Gene DE type