GO Enrichment Analysis of Co-expressed Genes with
AT2G45400
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 2 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 3 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 5 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 6 | GO:0010068: protoderm histogenesis | 0.00E+00 |
| 7 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 8 | GO:0015843: methylammonium transport | 0.00E+00 |
| 9 | GO:0009658: chloroplast organization | 3.68E-05 |
| 10 | GO:0005992: trehalose biosynthetic process | 5.88E-05 |
| 11 | GO:0007166: cell surface receptor signaling pathway | 1.53E-04 |
| 12 | GO:0048528: post-embryonic root development | 1.54E-04 |
| 13 | GO:0006747: FAD biosynthetic process | 2.25E-04 |
| 14 | GO:0006419: alanyl-tRNA aminoacylation | 2.25E-04 |
| 15 | GO:0009090: homoserine biosynthetic process | 2.25E-04 |
| 16 | GO:0070509: calcium ion import | 2.25E-04 |
| 17 | GO:0010480: microsporocyte differentiation | 2.25E-04 |
| 18 | GO:0006264: mitochondrial DNA replication | 2.25E-04 |
| 19 | GO:0033259: plastid DNA replication | 2.25E-04 |
| 20 | GO:1902458: positive regulation of stomatal opening | 2.25E-04 |
| 21 | GO:0009638: phototropism | 3.51E-04 |
| 22 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.43E-04 |
| 23 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.76E-04 |
| 24 | GO:0060359: response to ammonium ion | 5.00E-04 |
| 25 | GO:0070981: L-asparagine biosynthetic process | 5.00E-04 |
| 26 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.00E-04 |
| 27 | GO:0006529: asparagine biosynthetic process | 5.00E-04 |
| 28 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.00E-04 |
| 29 | GO:0006468: protein phosphorylation | 5.68E-04 |
| 30 | GO:0010020: chloroplast fission | 6.96E-04 |
| 31 | GO:0051127: positive regulation of actin nucleation | 8.13E-04 |
| 32 | GO:0001578: microtubule bundle formation | 8.13E-04 |
| 33 | GO:0043157: response to cation stress | 8.13E-04 |
| 34 | GO:0051639: actin filament network formation | 1.16E-03 |
| 35 | GO:0044211: CTP salvage | 1.16E-03 |
| 36 | GO:0019048: modulation by virus of host morphology or physiology | 1.16E-03 |
| 37 | GO:0009226: nucleotide-sugar biosynthetic process | 1.16E-03 |
| 38 | GO:0006164: purine nucleotide biosynthetic process | 1.16E-03 |
| 39 | GO:0031048: chromatin silencing by small RNA | 1.16E-03 |
| 40 | GO:0048645: animal organ formation | 1.16E-03 |
| 41 | GO:0015696: ammonium transport | 1.16E-03 |
| 42 | GO:0046739: transport of virus in multicellular host | 1.16E-03 |
| 43 | GO:2000904: regulation of starch metabolic process | 1.16E-03 |
| 44 | GO:0043572: plastid fission | 1.16E-03 |
| 45 | GO:2001141: regulation of RNA biosynthetic process | 1.16E-03 |
| 46 | GO:0009067: aspartate family amino acid biosynthetic process | 1.16E-03 |
| 47 | GO:0006810: transport | 1.46E-03 |
| 48 | GO:0051764: actin crosslink formation | 1.54E-03 |
| 49 | GO:0051322: anaphase | 1.54E-03 |
| 50 | GO:0072488: ammonium transmembrane transport | 1.54E-03 |
| 51 | GO:0015846: polyamine transport | 1.54E-03 |
| 52 | GO:0051567: histone H3-K9 methylation | 1.54E-03 |
| 53 | GO:0007020: microtubule nucleation | 1.54E-03 |
| 54 | GO:0044206: UMP salvage | 1.54E-03 |
| 55 | GO:0044205: 'de novo' UMP biosynthetic process | 1.54E-03 |
| 56 | GO:0009165: nucleotide biosynthetic process | 1.54E-03 |
| 57 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.60E-03 |
| 58 | GO:0010158: abaxial cell fate specification | 1.97E-03 |
| 59 | GO:0006465: signal peptide processing | 1.97E-03 |
| 60 | GO:0046785: microtubule polymerization | 1.97E-03 |
| 61 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.97E-03 |
| 62 | GO:0016123: xanthophyll biosynthetic process | 1.97E-03 |
| 63 | GO:0009959: negative gravitropism | 2.43E-03 |
| 64 | GO:0045962: positive regulation of development, heterochronic | 2.43E-03 |
| 65 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.43E-03 |
| 66 | GO:0006139: nucleobase-containing compound metabolic process | 2.43E-03 |
| 67 | GO:0006206: pyrimidine nucleobase metabolic process | 2.43E-03 |
| 68 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.43E-03 |
| 69 | GO:0009228: thiamine biosynthetic process | 2.43E-03 |
| 70 | GO:0016458: gene silencing | 2.43E-03 |
| 71 | GO:0009635: response to herbicide | 2.43E-03 |
| 72 | GO:0010405: arabinogalactan protein metabolic process | 2.43E-03 |
| 73 | GO:0009082: branched-chain amino acid biosynthetic process | 2.91E-03 |
| 74 | GO:0009099: valine biosynthetic process | 2.91E-03 |
| 75 | GO:0030488: tRNA methylation | 2.91E-03 |
| 76 | GO:0009088: threonine biosynthetic process | 2.91E-03 |
| 77 | GO:0051607: defense response to virus | 3.13E-03 |
| 78 | GO:0010050: vegetative phase change | 3.43E-03 |
| 79 | GO:0048437: floral organ development | 3.43E-03 |
| 80 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 3.43E-03 |
| 81 | GO:0010444: guard mother cell differentiation | 3.43E-03 |
| 82 | GO:0006400: tRNA modification | 3.43E-03 |
| 83 | GO:0015693: magnesium ion transport | 3.43E-03 |
| 84 | GO:0048564: photosystem I assembly | 3.98E-03 |
| 85 | GO:0042255: ribosome assembly | 3.98E-03 |
| 86 | GO:0006353: DNA-templated transcription, termination | 3.98E-03 |
| 87 | GO:0070413: trehalose metabolism in response to stress | 3.98E-03 |
| 88 | GO:0009850: auxin metabolic process | 3.98E-03 |
| 89 | GO:0009704: de-etiolation | 3.98E-03 |
| 90 | GO:2000070: regulation of response to water deprivation | 3.98E-03 |
| 91 | GO:0009231: riboflavin biosynthetic process | 3.98E-03 |
| 92 | GO:0052543: callose deposition in cell wall | 3.98E-03 |
| 93 | GO:0006002: fructose 6-phosphate metabolic process | 4.56E-03 |
| 94 | GO:0071482: cellular response to light stimulus | 4.56E-03 |
| 95 | GO:0009827: plant-type cell wall modification | 4.56E-03 |
| 96 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.56E-03 |
| 97 | GO:0009097: isoleucine biosynthetic process | 4.56E-03 |
| 98 | GO:0006098: pentose-phosphate shunt | 5.16E-03 |
| 99 | GO:0000373: Group II intron splicing | 5.16E-03 |
| 100 | GO:0000902: cell morphogenesis | 5.16E-03 |
| 101 | GO:0009086: methionine biosynthetic process | 5.79E-03 |
| 102 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 5.79E-03 |
| 103 | GO:0042761: very long-chain fatty acid biosynthetic process | 5.79E-03 |
| 104 | GO:0031425: chloroplast RNA processing | 5.79E-03 |
| 105 | GO:0006839: mitochondrial transport | 6.22E-03 |
| 106 | GO:0030422: production of siRNA involved in RNA interference | 6.45E-03 |
| 107 | GO:0006949: syncytium formation | 6.45E-03 |
| 108 | GO:0010015: root morphogenesis | 7.13E-03 |
| 109 | GO:0006415: translational termination | 7.13E-03 |
| 110 | GO:1903507: negative regulation of nucleic acid-templated transcription | 7.13E-03 |
| 111 | GO:0006352: DNA-templated transcription, initiation | 7.13E-03 |
| 112 | GO:0048229: gametophyte development | 7.13E-03 |
| 113 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.84E-03 |
| 114 | GO:0045037: protein import into chloroplast stroma | 7.84E-03 |
| 115 | GO:0010582: floral meristem determinacy | 7.84E-03 |
| 116 | GO:0009767: photosynthetic electron transport chain | 8.57E-03 |
| 117 | GO:0009785: blue light signaling pathway | 8.57E-03 |
| 118 | GO:0030036: actin cytoskeleton organization | 8.57E-03 |
| 119 | GO:0050826: response to freezing | 8.57E-03 |
| 120 | GO:0010075: regulation of meristem growth | 8.57E-03 |
| 121 | GO:0006094: gluconeogenesis | 8.57E-03 |
| 122 | GO:0006541: glutamine metabolic process | 9.33E-03 |
| 123 | GO:0010207: photosystem II assembly | 9.33E-03 |
| 124 | GO:0009934: regulation of meristem structural organization | 9.33E-03 |
| 125 | GO:0080167: response to karrikin | 9.96E-03 |
| 126 | GO:0090351: seedling development | 1.01E-02 |
| 127 | GO:0010030: positive regulation of seed germination | 1.01E-02 |
| 128 | GO:0070588: calcium ion transmembrane transport | 1.01E-02 |
| 129 | GO:0006417: regulation of translation | 1.05E-02 |
| 130 | GO:0010025: wax biosynthetic process | 1.09E-02 |
| 131 | GO:0006833: water transport | 1.09E-02 |
| 132 | GO:0006096: glycolytic process | 1.12E-02 |
| 133 | GO:0048367: shoot system development | 1.16E-02 |
| 134 | GO:0009116: nucleoside metabolic process | 1.17E-02 |
| 135 | GO:0051017: actin filament bundle assembly | 1.17E-02 |
| 136 | GO:0043622: cortical microtubule organization | 1.26E-02 |
| 137 | GO:0006825: copper ion transport | 1.26E-02 |
| 138 | GO:0016310: phosphorylation | 1.30E-02 |
| 139 | GO:0006306: DNA methylation | 1.34E-02 |
| 140 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.43E-02 |
| 141 | GO:0006730: one-carbon metabolic process | 1.43E-02 |
| 142 | GO:0031348: negative regulation of defense response | 1.43E-02 |
| 143 | GO:0080092: regulation of pollen tube growth | 1.43E-02 |
| 144 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.53E-02 |
| 145 | GO:0010082: regulation of root meristem growth | 1.53E-02 |
| 146 | GO:0009306: protein secretion | 1.62E-02 |
| 147 | GO:0016117: carotenoid biosynthetic process | 1.71E-02 |
| 148 | GO:0048653: anther development | 1.81E-02 |
| 149 | GO:0042631: cellular response to water deprivation | 1.81E-02 |
| 150 | GO:0042335: cuticle development | 1.81E-02 |
| 151 | GO:0008033: tRNA processing | 1.81E-02 |
| 152 | GO:0034220: ion transmembrane transport | 1.81E-02 |
| 153 | GO:0006342: chromatin silencing | 1.91E-02 |
| 154 | GO:0006508: proteolysis | 2.00E-02 |
| 155 | GO:0009646: response to absence of light | 2.01E-02 |
| 156 | GO:0008654: phospholipid biosynthetic process | 2.11E-02 |
| 157 | GO:0000302: response to reactive oxygen species | 2.22E-02 |
| 158 | GO:0016032: viral process | 2.32E-02 |
| 159 | GO:0032502: developmental process | 2.32E-02 |
| 160 | GO:0009630: gravitropism | 2.32E-02 |
| 161 | GO:0009828: plant-type cell wall loosening | 2.54E-02 |
| 162 | GO:0071805: potassium ion transmembrane transport | 2.65E-02 |
| 163 | GO:0000910: cytokinesis | 2.77E-02 |
| 164 | GO:0001666: response to hypoxia | 2.88E-02 |
| 165 | GO:0010027: thylakoid membrane organization | 2.88E-02 |
| 166 | GO:0030154: cell differentiation | 2.93E-02 |
| 167 | GO:0009816: defense response to bacterium, incompatible interaction | 3.00E-02 |
| 168 | GO:0009627: systemic acquired resistance | 3.12E-02 |
| 169 | GO:0006974: cellular response to DNA damage stimulus | 3.12E-02 |
| 170 | GO:0010411: xyloglucan metabolic process | 3.24E-02 |
| 171 | GO:0009853: photorespiration | 4.12E-02 |
| 172 | GO:0045087: innate immune response | 4.12E-02 |
| 173 | GO:0009637: response to blue light | 4.12E-02 |
| 174 | GO:0009723: response to ethylene | 4.19E-02 |
| 175 | GO:0048366: leaf development | 4.27E-02 |
| 176 | GO:0006631: fatty acid metabolic process | 4.66E-02 |
| 177 | GO:0046777: protein autophosphorylation | 4.80E-02 |
| 178 | GO:0008283: cell proliferation | 4.93E-02 |
| 179 | GO:0010114: response to red light | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 2 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 3 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 4 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 5 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 6 | GO:0019808: polyamine binding | 0.00E+00 |
| 7 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 8 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 9.13E-06 |
| 9 | GO:0004805: trehalose-phosphatase activity | 1.40E-05 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.25E-04 |
| 11 | GO:0004813: alanine-tRNA ligase activity | 2.25E-04 |
| 12 | GO:0004008: copper-exporting ATPase activity | 2.25E-04 |
| 13 | GO:0004071: aspartate-ammonia ligase activity | 2.25E-04 |
| 14 | GO:0003984: acetolactate synthase activity | 2.25E-04 |
| 15 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.25E-04 |
| 16 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.25E-04 |
| 17 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 2.25E-04 |
| 18 | GO:0016597: amino acid binding | 3.41E-04 |
| 19 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.00E-04 |
| 20 | GO:0003919: FMN adenylyltransferase activity | 5.00E-04 |
| 21 | GO:0004412: homoserine dehydrogenase activity | 5.00E-04 |
| 22 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 5.00E-04 |
| 23 | GO:0010291: carotene beta-ring hydroxylase activity | 5.00E-04 |
| 24 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.00E-04 |
| 25 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 5.00E-04 |
| 26 | GO:0070330: aromatase activity | 8.13E-04 |
| 27 | GO:0004674: protein serine/threonine kinase activity | 1.07E-03 |
| 28 | GO:0001872: (1->3)-beta-D-glucan binding | 1.16E-03 |
| 29 | GO:0004072: aspartate kinase activity | 1.16E-03 |
| 30 | GO:0035197: siRNA binding | 1.16E-03 |
| 31 | GO:0004737: pyruvate decarboxylase activity | 1.54E-03 |
| 32 | GO:0008409: 5'-3' exonuclease activity | 1.54E-03 |
| 33 | GO:0016987: sigma factor activity | 1.54E-03 |
| 34 | GO:0001053: plastid sigma factor activity | 1.54E-03 |
| 35 | GO:0004845: uracil phosphoribosyltransferase activity | 1.54E-03 |
| 36 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.97E-03 |
| 37 | GO:0018685: alkane 1-monooxygenase activity | 1.97E-03 |
| 38 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.43E-03 |
| 39 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.43E-03 |
| 40 | GO:0004332: fructose-bisphosphate aldolase activity | 2.43E-03 |
| 41 | GO:0008519: ammonium transmembrane transporter activity | 2.43E-03 |
| 42 | GO:0030976: thiamine pyrophosphate binding | 2.43E-03 |
| 43 | GO:0051015: actin filament binding | 2.61E-03 |
| 44 | GO:0016301: kinase activity | 2.78E-03 |
| 45 | GO:0008195: phosphatidate phosphatase activity | 2.91E-03 |
| 46 | GO:0004849: uridine kinase activity | 2.91E-03 |
| 47 | GO:0003730: mRNA 3'-UTR binding | 2.91E-03 |
| 48 | GO:0003872: 6-phosphofructokinase activity | 3.43E-03 |
| 49 | GO:0005375: copper ion transmembrane transporter activity | 4.56E-03 |
| 50 | GO:0004222: metalloendopeptidase activity | 4.75E-03 |
| 51 | GO:0003747: translation release factor activity | 5.16E-03 |
| 52 | GO:0004713: protein tyrosine kinase activity | 6.45E-03 |
| 53 | GO:0005524: ATP binding | 7.00E-03 |
| 54 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.13E-03 |
| 55 | GO:0043621: protein self-association | 7.61E-03 |
| 56 | GO:0004521: endoribonuclease activity | 7.84E-03 |
| 57 | GO:0000049: tRNA binding | 7.84E-03 |
| 58 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 8.57E-03 |
| 59 | GO:0015095: magnesium ion transmembrane transporter activity | 8.57E-03 |
| 60 | GO:0005262: calcium channel activity | 8.57E-03 |
| 61 | GO:0003887: DNA-directed DNA polymerase activity | 1.09E-02 |
| 62 | GO:0005528: FK506 binding | 1.17E-02 |
| 63 | GO:0003714: transcription corepressor activity | 1.17E-02 |
| 64 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.26E-02 |
| 65 | GO:0015079: potassium ion transmembrane transporter activity | 1.26E-02 |
| 66 | GO:0033612: receptor serine/threonine kinase binding | 1.34E-02 |
| 67 | GO:0008514: organic anion transmembrane transporter activity | 1.62E-02 |
| 68 | GO:0003727: single-stranded RNA binding | 1.62E-02 |
| 69 | GO:0008536: Ran GTPase binding | 1.91E-02 |
| 70 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.22E-02 |
| 71 | GO:0016791: phosphatase activity | 2.54E-02 |
| 72 | GO:0008483: transaminase activity | 2.65E-02 |
| 73 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.65E-02 |
| 74 | GO:0015250: water channel activity | 2.88E-02 |
| 75 | GO:0030247: polysaccharide binding | 3.24E-02 |
| 76 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.24E-02 |
| 77 | GO:0008236: serine-type peptidase activity | 3.36E-02 |
| 78 | GO:0015238: drug transmembrane transporter activity | 3.61E-02 |
| 79 | GO:0003682: chromatin binding | 3.84E-02 |
| 80 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.86E-02 |
| 81 | GO:0003746: translation elongation factor activity | 4.12E-02 |
| 82 | GO:0050660: flavin adenine dinucleotide binding | 4.19E-02 |
| 83 | GO:0003993: acid phosphatase activity | 4.25E-02 |
| 84 | GO:0050661: NADP binding | 4.52E-02 |
| 85 | GO:0004185: serine-type carboxypeptidase activity | 4.93E-02 |
| 86 | GO:0003723: RNA binding | 4.98E-02 |
| 87 | GO:0020037: heme binding | 4.99E-02 |