Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G45340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046719: regulation by virus of viral protein levels in host cell0.00E+00
2GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
3GO:1901698: response to nitrogen compound0.00E+00
4GO:0009606: tropism0.00E+00
5GO:0090322: regulation of superoxide metabolic process0.00E+00
6GO:1903224: regulation of endodermal cell differentiation0.00E+00
7GO:0097164: ammonium ion metabolic process0.00E+00
8GO:0045184: establishment of protein localization0.00E+00
9GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
10GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.84E-05
11GO:2000038: regulation of stomatal complex development7.33E-05
12GO:0048437: floral organ development2.93E-04
13GO:0006955: immune response2.93E-04
14GO:0034757: negative regulation of iron ion transport3.42E-04
15GO:0034970: histone H3-R2 methylation3.42E-04
16GO:0042659: regulation of cell fate specification3.42E-04
17GO:0034972: histone H3-R26 methylation3.42E-04
18GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic3.42E-04
19GO:0070509: calcium ion import3.42E-04
20GO:0090558: plant epidermis development3.42E-04
21GO:0010063: positive regulation of trichoblast fate specification3.42E-04
22GO:1903866: palisade mesophyll development3.42E-04
23GO:0010480: microsporocyte differentiation3.42E-04
24GO:0034971: histone H3-R17 methylation3.42E-04
25GO:0033206: meiotic cytokinesis3.42E-04
26GO:0035987: endodermal cell differentiation3.42E-04
27GO:0043609: regulation of carbon utilization3.42E-04
28GO:0006436: tryptophanyl-tRNA aminoacylation3.42E-04
29GO:0010342: endosperm cellularization3.42E-04
30GO:0007389: pattern specification process4.51E-04
31GO:0010254: nectary development7.45E-04
32GO:0070981: L-asparagine biosynthetic process7.45E-04
33GO:0010434: bract formation7.45E-04
34GO:0010271: regulation of chlorophyll catabolic process7.45E-04
35GO:0009662: etioplast organization7.45E-04
36GO:0048439: flower morphogenesis7.45E-04
37GO:0080009: mRNA methylation7.45E-04
38GO:0006529: asparagine biosynthetic process7.45E-04
39GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine7.45E-04
40GO:2000123: positive regulation of stomatal complex development7.45E-04
41GO:0009767: photosynthetic electron transport chain1.11E-03
42GO:0000160: phosphorelay signal transduction system1.18E-03
43GO:0009734: auxin-activated signaling pathway1.20E-03
44GO:0090708: specification of plant organ axis polarity1.21E-03
45GO:0080117: secondary growth1.21E-03
46GO:0006000: fructose metabolic process1.21E-03
47GO:0044210: 'de novo' CTP biosynthetic process1.21E-03
48GO:0090391: granum assembly1.21E-03
49GO:0071705: nitrogen compound transport1.21E-03
50GO:0042780: tRNA 3'-end processing1.21E-03
51GO:0001578: microtubule bundle formation1.21E-03
52GO:0009954: proximal/distal pattern formation1.21E-03
53GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.21E-03
54GO:0080167: response to karrikin1.23E-03
55GO:0009944: polarity specification of adaxial/abaxial axis1.72E-03
56GO:0010239: chloroplast mRNA processing1.74E-03
57GO:0044211: CTP salvage1.74E-03
58GO:0019048: modulation by virus of host morphology or physiology1.74E-03
59GO:0046739: transport of virus in multicellular host1.74E-03
60GO:2000904: regulation of starch metabolic process1.74E-03
61GO:0031048: chromatin silencing by small RNA1.74E-03
62GO:0051289: protein homotetramerization1.74E-03
63GO:0010371: regulation of gibberellin biosynthetic process1.74E-03
64GO:1902476: chloride transmembrane transport1.74E-03
65GO:0010071: root meristem specification1.74E-03
66GO:0051513: regulation of monopolar cell growth1.74E-03
67GO:0009416: response to light stimulus1.89E-03
68GO:0006418: tRNA aminoacylation for protein translation1.90E-03
69GO:0016998: cell wall macromolecule catabolic process2.09E-03
70GO:0051322: anaphase2.33E-03
71GO:0071249: cellular response to nitrate2.33E-03
72GO:0000914: phragmoplast assembly2.33E-03
73GO:0030104: water homeostasis2.33E-03
74GO:0051567: histone H3-K9 methylation2.33E-03
75GO:0006021: inositol biosynthetic process2.33E-03
76GO:0044206: UMP salvage2.33E-03
77GO:0006479: protein methylation2.33E-03
78GO:0010082: regulation of root meristem growth2.49E-03
79GO:0032876: negative regulation of DNA endoreduplication2.98E-03
80GO:0030308: negative regulation of cell growth2.98E-03
81GO:0010375: stomatal complex patterning2.98E-03
82GO:0006544: glycine metabolic process2.98E-03
83GO:0048497: maintenance of floral organ identity2.98E-03
84GO:1902183: regulation of shoot apical meristem development2.98E-03
85GO:0009736: cytokinin-activated signaling pathway3.02E-03
86GO:0009913: epidermal cell differentiation3.68E-03
87GO:0006655: phosphatidylglycerol biosynthetic process3.68E-03
88GO:0016554: cytidine to uridine editing3.68E-03
89GO:0042793: transcription from plastid promoter3.68E-03
90GO:0048831: regulation of shoot system development3.68E-03
91GO:0042176: regulation of protein catabolic process3.68E-03
92GO:0010315: auxin efflux3.68E-03
93GO:0006206: pyrimidine nucleobase metabolic process3.68E-03
94GO:0018258: protein O-linked glycosylation via hydroxyproline3.68E-03
95GO:0016458: gene silencing3.68E-03
96GO:0009643: photosynthetic acclimation3.68E-03
97GO:0006563: L-serine metabolic process3.68E-03
98GO:0010405: arabinogalactan protein metabolic process3.68E-03
99GO:2000067: regulation of root morphogenesis4.43E-03
100GO:0071470: cellular response to osmotic stress4.43E-03
101GO:0009082: branched-chain amino acid biosynthetic process4.43E-03
102GO:0048509: regulation of meristem development4.43E-03
103GO:2000033: regulation of seed dormancy process4.43E-03
104GO:0009099: valine biosynthetic process4.43E-03
105GO:0030488: tRNA methylation4.43E-03
106GO:2000037: regulation of stomatal complex patterning4.43E-03
107GO:0010310: regulation of hydrogen peroxide metabolic process4.43E-03
108GO:0010583: response to cyclopentenone4.50E-03
109GO:0010252: auxin homeostasis5.11E-03
110GO:0009828: plant-type cell wall loosening5.11E-03
111GO:0048528: post-embryonic root development5.23E-03
112GO:0006821: chloride transport5.23E-03
113GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.23E-03
114GO:0009610: response to symbiotic fungus5.23E-03
115GO:0009793: embryo development ending in seed dormancy5.69E-03
116GO:0000910: cytokinesis5.76E-03
117GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.08E-03
118GO:0001522: pseudouridine synthesis6.08E-03
119GO:0030162: regulation of proteolysis6.08E-03
120GO:0048766: root hair initiation6.08E-03
121GO:0055075: potassium ion homeostasis6.08E-03
122GO:0000105: histidine biosynthetic process6.08E-03
123GO:0010029: regulation of seed germination6.45E-03
124GO:0009058: biosynthetic process6.74E-03
125GO:0006002: fructose 6-phosphate metabolic process6.98E-03
126GO:0009827: plant-type cell wall modification6.98E-03
127GO:0010497: plasmodesmata-mediated intercellular transport6.98E-03
128GO:0009097: isoleucine biosynthetic process6.98E-03
129GO:0010411: xyloglucan metabolic process7.19E-03
130GO:0071555: cell wall organization7.61E-03
131GO:2000024: regulation of leaf development7.91E-03
132GO:0000373: Group II intron splicing7.91E-03
133GO:0000902: cell morphogenesis7.91E-03
134GO:0048481: plant ovule development7.97E-03
135GO:0009638: phototropism8.89E-03
136GO:0035999: tetrahydrofolate interconversion8.89E-03
137GO:0042761: very long-chain fatty acid biosynthetic process8.89E-03
138GO:2000280: regulation of root development8.89E-03
139GO:0006349: regulation of gene expression by genetic imprinting8.89E-03
140GO:1900865: chloroplast RNA modification8.89E-03
141GO:0031425: chloroplast RNA processing8.89E-03
142GO:0006468: protein phosphorylation9.00E-03
143GO:0009451: RNA modification9.78E-03
144GO:0010048: vernalization response9.92E-03
145GO:0006535: cysteine biosynthetic process from serine9.92E-03
146GO:0030422: production of siRNA involved in RNA interference9.92E-03
147GO:0048364: root development1.02E-02
148GO:0009089: lysine biosynthetic process via diaminopimelate1.10E-02
149GO:0048229: gametophyte development1.10E-02
150GO:0016485: protein processing1.10E-02
151GO:0008361: regulation of cell size1.21E-02
152GO:0006790: sulfur compound metabolic process1.21E-02
153GO:0015706: nitrate transport1.21E-02
154GO:0016024: CDP-diacylglycerol biosynthetic process1.21E-02
155GO:0010582: floral meristem determinacy1.21E-02
156GO:0009926: auxin polar transport1.31E-02
157GO:0010102: lateral root morphogenesis1.32E-02
158GO:0009785: blue light signaling pathway1.32E-02
159GO:0010075: regulation of meristem growth1.32E-02
160GO:0042546: cell wall biogenesis1.36E-02
161GO:0006541: glutamine metabolic process1.44E-02
162GO:0010020: chloroplast fission1.44E-02
163GO:0009934: regulation of meristem structural organization1.44E-02
164GO:0010167: response to nitrate1.56E-02
165GO:0070588: calcium ion transmembrane transport1.56E-02
166GO:0046854: phosphatidylinositol phosphorylation1.56E-02
167GO:0042538: hyperosmotic salinity response1.64E-02
168GO:0009664: plant-type cell wall organization1.64E-02
169GO:0009658: chloroplast organization1.66E-02
170GO:0006071: glycerol metabolic process1.69E-02
171GO:0006833: water transport1.69E-02
172GO:0019344: cysteine biosynthetic process1.82E-02
173GO:0009863: salicylic acid mediated signaling pathway1.82E-02
174GO:0010187: negative regulation of seed germination1.82E-02
175GO:2000377: regulation of reactive oxygen species metabolic process1.82E-02
176GO:0005992: trehalose biosynthetic process1.82E-02
177GO:0051302: regulation of cell division1.95E-02
178GO:0019953: sexual reproduction1.95E-02
179GO:0006825: copper ion transport1.95E-02
180GO:0009909: regulation of flower development1.96E-02
181GO:0006306: DNA methylation2.08E-02
182GO:0010431: seed maturation2.08E-02
183GO:0048316: seed development2.16E-02
184GO:0048367: shoot system development2.16E-02
185GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.37E-02
186GO:0071215: cellular response to abscisic acid stimulus2.37E-02
187GO:0010227: floral organ abscission2.37E-02
188GO:0006284: base-excision repair2.51E-02
189GO:0042127: regulation of cell proliferation2.51E-02
190GO:0009306: protein secretion2.51E-02
191GO:0070417: cellular response to cold2.66E-02
192GO:0045892: negative regulation of transcription, DNA-templated2.78E-02
193GO:0048653: anther development2.81E-02
194GO:0042631: cellular response to water deprivation2.81E-02
195GO:0000226: microtubule cytoskeleton organization2.81E-02
196GO:0000271: polysaccharide biosynthetic process2.81E-02
197GO:0010501: RNA secondary structure unwinding2.81E-02
198GO:0010087: phloem or xylem histogenesis2.81E-02
199GO:0009958: positive gravitropism2.96E-02
200GO:0009960: endosperm development2.96E-02
201GO:0045489: pectin biosynthetic process2.96E-02
202GO:0010305: leaf vascular tissue pattern formation2.96E-02
203GO:0006342: chromatin silencing2.96E-02
204GO:0009646: response to absence of light3.12E-02
205GO:0048544: recognition of pollen3.12E-02
206GO:0007018: microtubule-based movement3.12E-02
207GO:0048825: cotyledon development3.28E-02
208GO:0008654: phospholipid biosynthetic process3.28E-02
209GO:0009851: auxin biosynthetic process3.28E-02
210GO:0000302: response to reactive oxygen species3.44E-02
211GO:0009630: gravitropism3.61E-02
212GO:0010090: trichome morphogenesis3.78E-02
213GO:0071805: potassium ion transmembrane transport4.12E-02
214GO:0007267: cell-cell signaling4.12E-02
215GO:0040008: regulation of growth4.14E-02
216GO:0051607: defense response to virus4.30E-02
217GO:0001666: response to hypoxia4.47E-02
218GO:0010027: thylakoid membrane organization4.47E-02
219GO:0009816: defense response to bacterium, incompatible interaction4.65E-02
220GO:0007166: cell surface receptor signaling pathway4.94E-02
RankGO TermAdjusted P value
1GO:0042834: peptidoglycan binding0.00E+00
2GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
3GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
4GO:0004401: histidinol-phosphatase activity0.00E+00
5GO:0004056: argininosuccinate lyase activity0.00E+00
6GO:0070009: serine-type aminopeptidase activity0.00E+00
7GO:0052834: inositol monophosphate phosphatase activity0.00E+00
8GO:0008836: diaminopimelate decarboxylase activity3.42E-04
9GO:0016274: protein-arginine N-methyltransferase activity3.42E-04
10GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity3.42E-04
11GO:0004008: copper-exporting ATPase activity3.42E-04
12GO:0004071: aspartate-ammonia ligase activity3.42E-04
13GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity3.42E-04
14GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.42E-04
15GO:0004160: dihydroxy-acid dehydratase activity3.42E-04
16GO:0004830: tryptophan-tRNA ligase activity3.42E-04
17GO:0010347: L-galactose-1-phosphate phosphatase activity3.42E-04
18GO:0009672: auxin:proton symporter activity6.39E-04
19GO:0052832: inositol monophosphate 3-phosphatase activity7.45E-04
20GO:0008934: inositol monophosphate 1-phosphatase activity7.45E-04
21GO:0052833: inositol monophosphate 4-phosphatase activity7.45E-04
22GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity7.45E-04
23GO:0009884: cytokinin receptor activity7.45E-04
24GO:0035241: protein-arginine omega-N monomethyltransferase activity7.45E-04
25GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity7.45E-04
26GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity7.45E-04
27GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity7.45E-04
28GO:0010329: auxin efflux transmembrane transporter activity1.11E-03
29GO:0047274: galactinol-sucrose galactosyltransferase activity1.21E-03
30GO:0070330: aromatase activity1.21E-03
31GO:0017150: tRNA dihydrouridine synthase activity1.21E-03
32GO:0042781: 3'-tRNA processing endoribonuclease activity1.21E-03
33GO:0005034: osmosensor activity1.21E-03
34GO:0008469: histone-arginine N-methyltransferase activity1.21E-03
35GO:0003883: CTP synthase activity1.74E-03
36GO:0035197: siRNA binding1.74E-03
37GO:0001872: (1->3)-beta-D-glucan binding1.74E-03
38GO:0008017: microtubule binding2.10E-03
39GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed2.33E-03
40GO:0005253: anion channel activity2.33E-03
41GO:0004845: uracil phosphoribosyltransferase activity2.33E-03
42GO:0016836: hydro-lyase activity2.33E-03
43GO:0003727: single-stranded RNA binding2.71E-03
44GO:0004812: aminoacyl-tRNA ligase activity2.93E-03
45GO:0004372: glycine hydroxymethyltransferase activity2.98E-03
46GO:0005275: amine transmembrane transporter activity2.98E-03
47GO:0018685: alkane 1-monooxygenase activity2.98E-03
48GO:0008725: DNA-3-methyladenine glycosylase activity2.98E-03
49GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.28E-03
50GO:0003777: microtubule motor activity3.43E-03
51GO:1990714: hydroxyproline O-galactosyltransferase activity3.68E-03
52GO:0005247: voltage-gated chloride channel activity3.68E-03
53GO:2001070: starch binding3.68E-03
54GO:0004605: phosphatidate cytidylyltransferase activity3.68E-03
55GO:0019901: protein kinase binding3.94E-03
56GO:0016762: xyloglucan:xyloglucosyl transferase activity4.22E-03
57GO:0008195: phosphatidate phosphatase activity4.43E-03
58GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.43E-03
59GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.43E-03
60GO:0004849: uridine kinase activity4.43E-03
61GO:0019900: kinase binding4.43E-03
62GO:0004124: cysteine synthase activity4.43E-03
63GO:0000156: phosphorelay response regulator activity4.80E-03
64GO:0004674: protein serine/threonine kinase activity5.97E-03
65GO:0005375: copper ion transmembrane transporter activity6.98E-03
66GO:0016798: hydrolase activity, acting on glycosyl bonds7.19E-03
67GO:0004871: signal transducer activity7.47E-03
68GO:0008889: glycerophosphodiester phosphodiesterase activity7.91E-03
69GO:0000989: transcription factor activity, transcription factor binding7.91E-03
70GO:0004673: protein histidine kinase activity9.92E-03
71GO:0004805: trehalose-phosphatase activity9.92E-03
72GO:0004519: endonuclease activity1.09E-02
73GO:0005089: Rho guanyl-nucleotide exchange factor activity1.10E-02
74GO:0005524: ATP binding1.14E-02
75GO:0051539: 4 iron, 4 sulfur cluster binding1.15E-02
76GO:0004521: endoribonuclease activity1.21E-02
77GO:0009982: pseudouridine synthase activity1.32E-02
78GO:0004022: alcohol dehydrogenase (NAD) activity1.32E-02
79GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.32E-02
80GO:0031072: heat shock protein binding1.32E-02
81GO:0000155: phosphorelay sensor kinase activity1.32E-02
82GO:0005262: calcium channel activity1.32E-02
83GO:0008168: methyltransferase activity1.58E-02
84GO:0003729: mRNA binding1.64E-02
85GO:0043424: protein histidine kinase binding1.95E-02
86GO:0005345: purine nucleobase transmembrane transporter activity1.95E-02
87GO:0015079: potassium ion transmembrane transporter activity1.95E-02
88GO:0033612: receptor serine/threonine kinase binding2.08E-02
89GO:0008408: 3'-5' exonuclease activity2.08E-02
90GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.22E-02
91GO:0004650: polygalacturonase activity2.30E-02
92GO:0018024: histone-lysine N-methyltransferase activity2.66E-02
93GO:0004527: exonuclease activity2.96E-02
94GO:0016758: transferase activity, transferring hexosyl groups3.07E-02
95GO:0030170: pyridoxal phosphate binding3.50E-02
96GO:0016759: cellulose synthase activity3.95E-02
97GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.05E-02
98GO:0016722: oxidoreductase activity, oxidizing metal ions4.12E-02
99GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.12E-02
100GO:0008237: metallopeptidase activity4.12E-02
101GO:0003723: RNA binding4.18E-02
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Gene type



Gene DE type