Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G43010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0010335: response to non-ionic osmotic stress0.00E+00
4GO:1901918: negative regulation of exoribonuclease activity0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
7GO:0015717: triose phosphate transport0.00E+00
8GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
9GO:0005996: monosaccharide metabolic process0.00E+00
10GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
11GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
12GO:0046471: phosphatidylglycerol metabolic process0.00E+00
13GO:0015995: chlorophyll biosynthetic process3.97E-14
14GO:0015979: photosynthesis2.40E-12
15GO:0010207: photosystem II assembly3.87E-09
16GO:0055114: oxidation-reduction process1.59E-08
17GO:0032544: plastid translation7.36E-07
18GO:0009658: chloroplast organization1.75E-06
19GO:0019252: starch biosynthetic process5.82E-06
20GO:0006094: gluconeogenesis6.77E-06
21GO:0030388: fructose 1,6-bisphosphate metabolic process1.05E-05
22GO:1902326: positive regulation of chlorophyll biosynthetic process1.05E-05
23GO:0018298: protein-chromophore linkage3.39E-05
24GO:0006000: fructose metabolic process3.59E-05
25GO:0032259: methylation9.71E-05
26GO:0009735: response to cytokinin1.02E-04
27GO:0009773: photosynthetic electron transport in photosystem I1.08E-04
28GO:0015994: chlorophyll metabolic process1.34E-04
29GO:0010021: amylopectin biosynthetic process1.34E-04
30GO:0019253: reductive pentose-phosphate cycle1.91E-04
31GO:0006636: unsaturated fatty acid biosynthetic process2.63E-04
32GO:0009768: photosynthesis, light harvesting in photosystem I3.47E-04
33GO:0043007: maintenance of rDNA4.90E-04
34GO:0034337: RNA folding4.90E-04
35GO:0019510: S-adenosylhomocysteine catabolic process4.90E-04
36GO:0051180: vitamin transport4.90E-04
37GO:0015969: guanosine tetraphosphate metabolic process4.90E-04
38GO:0030974: thiamine pyrophosphate transport4.90E-04
39GO:0046467: membrane lipid biosynthetic process4.90E-04
40GO:0043489: RNA stabilization4.90E-04
41GO:0043953: protein transport by the Tat complex4.90E-04
42GO:0010426: DNA methylation on cytosine within a CHH sequence4.90E-04
43GO:0065002: intracellular protein transmembrane transport4.90E-04
44GO:0043087: regulation of GTPase activity4.90E-04
45GO:0071461: cellular response to redox state4.90E-04
46GO:0051775: response to redox state4.90E-04
47GO:0071277: cellular response to calcium ion4.90E-04
48GO:0046167: glycerol-3-phosphate biosynthetic process4.90E-04
49GO:0009772: photosynthetic electron transport in photosystem II4.99E-04
50GO:0009645: response to low light intensity stimulus4.99E-04
51GO:0010196: nonphotochemical quenching4.99E-04
52GO:0006002: fructose 6-phosphate metabolic process7.58E-04
53GO:0071482: cellular response to light stimulus7.58E-04
54GO:0006783: heme biosynthetic process9.06E-04
55GO:0006754: ATP biosynthetic process9.06E-04
56GO:0008616: queuosine biosynthetic process1.05E-03
57GO:0006729: tetrahydrobiopterin biosynthetic process1.05E-03
58GO:0080005: photosystem stoichiometry adjustment1.05E-03
59GO:0033353: S-adenosylmethionine cycle1.05E-03
60GO:0042819: vitamin B6 biosynthetic process1.05E-03
61GO:0015893: drug transport1.05E-03
62GO:0006650: glycerophospholipid metabolic process1.05E-03
63GO:0006779: porphyrin-containing compound biosynthetic process1.07E-03
64GO:0018119: peptidyl-cysteine S-nitrosylation1.43E-03
65GO:0010027: thylakoid membrane organization1.55E-03
66GO:0090391: granum assembly1.72E-03
67GO:0006518: peptide metabolic process1.72E-03
68GO:0046168: glycerol-3-phosphate catabolic process1.72E-03
69GO:0035436: triose phosphate transmembrane transport1.72E-03
70GO:0044375: regulation of peroxisome size1.72E-03
71GO:0006081: cellular aldehyde metabolic process1.72E-03
72GO:0005986: sucrose biosynthetic process1.87E-03
73GO:0007031: peroxisome organization2.36E-03
74GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.50E-03
75GO:0006020: inositol metabolic process2.50E-03
76GO:0071484: cellular response to light intensity2.50E-03
77GO:0009152: purine ribonucleotide biosynthetic process2.50E-03
78GO:0046653: tetrahydrofolate metabolic process2.50E-03
79GO:0006107: oxaloacetate metabolic process2.50E-03
80GO:0033014: tetrapyrrole biosynthetic process2.50E-03
81GO:0008615: pyridoxine biosynthetic process2.50E-03
82GO:0010731: protein glutathionylation2.50E-03
83GO:0006072: glycerol-3-phosphate metabolic process2.50E-03
84GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis2.50E-03
85GO:2001141: regulation of RNA biosynthetic process2.50E-03
86GO:0042823: pyridoxal phosphate biosynthetic process2.50E-03
87GO:0006810: transport2.64E-03
88GO:0009853: photorespiration2.95E-03
89GO:0034599: cellular response to oxidative stress3.13E-03
90GO:0015976: carbon utilization3.36E-03
91GO:0015689: molybdate ion transport3.36E-03
92GO:0009765: photosynthesis, light harvesting3.36E-03
93GO:0045727: positive regulation of translation3.36E-03
94GO:0006546: glycine catabolic process3.36E-03
95GO:0006021: inositol biosynthetic process3.36E-03
96GO:0010600: regulation of auxin biosynthetic process3.36E-03
97GO:0006734: NADH metabolic process3.36E-03
98GO:0015713: phosphoglycerate transport3.36E-03
99GO:0031408: oxylipin biosynthetic process3.55E-03
100GO:0010114: response to red light4.09E-03
101GO:0009107: lipoate biosynthetic process4.31E-03
102GO:0016123: xanthophyll biosynthetic process4.31E-03
103GO:0000304: response to singlet oxygen4.31E-03
104GO:0006465: signal peptide processing4.31E-03
105GO:0006564: L-serine biosynthetic process4.31E-03
106GO:0006656: phosphatidylcholine biosynthetic process4.31E-03
107GO:0043097: pyrimidine nucleoside salvage4.31E-03
108GO:0042549: photosystem II stabilization5.34E-03
109GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.34E-03
110GO:0009643: photosynthetic acclimation5.34E-03
111GO:0006206: pyrimidine nucleobase metabolic process5.34E-03
112GO:0046855: inositol phosphate dephosphorylation5.34E-03
113GO:0042631: cellular response to water deprivation5.42E-03
114GO:0009409: response to cold5.80E-03
115GO:0006520: cellular amino acid metabolic process5.84E-03
116GO:0006412: translation6.40E-03
117GO:0045926: negative regulation of growth6.44E-03
118GO:0017148: negative regulation of translation6.44E-03
119GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.44E-03
120GO:0010189: vitamin E biosynthetic process6.44E-03
121GO:0009854: oxidative photosynthetic carbon pathway6.44E-03
122GO:1901259: chloroplast rRNA processing6.44E-03
123GO:0000054: ribosomal subunit export from nucleus6.44E-03
124GO:1900056: negative regulation of leaf senescence7.62E-03
125GO:1900057: positive regulation of leaf senescence7.62E-03
126GO:0016559: peroxisome fission8.87E-03
127GO:0010928: regulation of auxin mediated signaling pathway8.87E-03
128GO:0005978: glycogen biosynthetic process8.87E-03
129GO:0009704: de-etiolation8.87E-03
130GO:0042255: ribosome assembly8.87E-03
131GO:0006353: DNA-templated transcription, termination8.87E-03
132GO:0006396: RNA processing9.77E-03
133GO:0009932: cell tip growth1.02E-02
134GO:0006526: arginine biosynthetic process1.02E-02
135GO:0009657: plastid organization1.02E-02
136GO:0090305: nucleic acid phosphodiester bond hydrolysis1.16E-02
137GO:0010206: photosystem II repair1.16E-02
138GO:0090333: regulation of stomatal closure1.16E-02
139GO:0006098: pentose-phosphate shunt1.16E-02
140GO:0005982: starch metabolic process1.30E-02
141GO:0010205: photoinhibition1.30E-02
142GO:0010267: production of ta-siRNAs involved in RNA interference1.30E-02
143GO:0010380: regulation of chlorophyll biosynthetic process1.30E-02
144GO:0044550: secondary metabolite biosynthetic process1.37E-02
145GO:0006535: cysteine biosynthetic process from serine1.45E-02
146GO:0006782: protoporphyrinogen IX biosynthetic process1.45E-02
147GO:0009688: abscisic acid biosynthetic process1.45E-02
148GO:0043069: negative regulation of programmed cell death1.45E-02
149GO:0019684: photosynthesis, light reaction1.61E-02
150GO:0009698: phenylpropanoid metabolic process1.61E-02
151GO:0006352: DNA-templated transcription, initiation1.61E-02
152GO:0000272: polysaccharide catabolic process1.61E-02
153GO:0006415: translational termination1.61E-02
154GO:0006790: sulfur compound metabolic process1.78E-02
155GO:0016925: protein sumoylation1.78E-02
156GO:0005975: carbohydrate metabolic process1.93E-02
157GO:0018107: peptidyl-threonine phosphorylation1.94E-02
158GO:0009725: response to hormone1.94E-02
159GO:0009767: photosynthetic electron transport chain1.94E-02
160GO:0006108: malate metabolic process1.94E-02
161GO:0009266: response to temperature stimulus2.12E-02
162GO:0034605: cellular response to heat2.12E-02
163GO:0042742: defense response to bacterium2.16E-02
164GO:0005985: sucrose metabolic process2.30E-02
165GO:0046854: phosphatidylinositol phosphorylation2.30E-02
166GO:0009644: response to high light intensity2.44E-02
167GO:0019762: glucosinolate catabolic process2.48E-02
168GO:0009833: plant-type primary cell wall biogenesis2.48E-02
169GO:0009636: response to toxic substance2.53E-02
170GO:0019344: cysteine biosynthetic process2.67E-02
171GO:0000027: ribosomal large subunit assembly2.67E-02
172GO:0006406: mRNA export from nucleus2.67E-02
173GO:0006364: rRNA processing3.04E-02
174GO:0009585: red, far-red light phototransduction3.04E-02
175GO:0061077: chaperone-mediated protein folding3.07E-02
176GO:0006306: DNA methylation3.07E-02
177GO:0019748: secondary metabolic process3.27E-02
178GO:0016226: iron-sulfur cluster assembly3.27E-02
179GO:0030433: ubiquitin-dependent ERAD pathway3.27E-02
180GO:0007005: mitochondrion organization3.27E-02
181GO:0006730: one-carbon metabolic process3.27E-02
182GO:0042254: ribosome biogenesis3.34E-02
183GO:0009693: ethylene biosynthetic process3.48E-02
184GO:0006096: glycolytic process3.59E-02
185GO:0043086: negative regulation of catalytic activity3.59E-02
186GO:0006817: phosphate ion transport3.70E-02
187GO:0009306: protein secretion3.70E-02
188GO:0019722: calcium-mediated signaling3.70E-02
189GO:0009561: megagametogenesis3.70E-02
190GO:0006606: protein import into nucleus4.14E-02
191GO:0009741: response to brassinosteroid4.36E-02
192GO:0006662: glycerol ether metabolic process4.36E-02
193GO:0010182: sugar mediated signaling pathway4.36E-02
194GO:0009742: brassinosteroid mediated signaling pathway4.57E-02
195GO:0009646: response to absence of light4.59E-02
196GO:0015986: ATP synthesis coupled proton transport4.59E-02
197GO:0006814: sodium ion transport4.59E-02
198GO:0009791: post-embryonic development4.83E-02
199GO:0008654: phospholipid biosynthetic process4.83E-02
RankGO TermAdjusted P value
1GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
2GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
3GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
4GO:0050281: serine-glyoxylate transaminase activity0.00E+00
5GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
6GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
7GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
8GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
9GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
10GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
11GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
12GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
13GO:0045550: geranylgeranyl reductase activity0.00E+00
14GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
15GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
16GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
17GO:0090711: FMN hydrolase activity0.00E+00
18GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
19GO:0008974: phosphoribulokinase activity0.00E+00
20GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
21GO:0004760: serine-pyruvate transaminase activity0.00E+00
22GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
23GO:0008465: glycerate dehydrogenase activity0.00E+00
24GO:0046408: chlorophyll synthetase activity0.00E+00
25GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
26GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
27GO:0019843: rRNA binding3.90E-09
28GO:0016851: magnesium chelatase activity5.51E-07
29GO:0009011: starch synthase activity1.58E-06
30GO:0031072: heat shock protein binding6.77E-06
31GO:0018708: thiol S-methyltransferase activity1.05E-05
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.05E-05
33GO:0016168: chlorophyll binding2.05E-05
34GO:0004373: glycogen (starch) synthase activity3.59E-05
35GO:0016491: oxidoreductase activity6.61E-05
36GO:0043495: protein anchor1.34E-04
37GO:0051287: NAD binding1.54E-04
38GO:0008266: poly(U) RNA binding1.91E-04
39GO:0031409: pigment binding2.63E-04
40GO:0004332: fructose-bisphosphate aldolase activity2.90E-04
41GO:0003735: structural constituent of ribosome3.12E-04
42GO:0035671: enone reductase activity4.90E-04
43GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.90E-04
44GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.90E-04
45GO:0090422: thiamine pyrophosphate transporter activity4.90E-04
46GO:0004013: adenosylhomocysteinase activity4.90E-04
47GO:0080132: fatty acid alpha-hydroxylase activity4.90E-04
48GO:0008746: NAD(P)+ transhydrogenase activity4.90E-04
49GO:0004325: ferrochelatase activity4.90E-04
50GO:0010313: phytochrome binding4.90E-04
51GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.90E-04
52GO:0008168: methyltransferase activity4.92E-04
53GO:0019899: enzyme binding4.99E-04
54GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.58E-04
55GO:0071949: FAD binding9.06E-04
56GO:0048038: quinone binding9.76E-04
57GO:0010297: heteropolysaccharide binding1.05E-03
58GO:0009977: proton motive force dependent protein transmembrane transporter activity1.05E-03
59GO:0004617: phosphoglycerate dehydrogenase activity1.05E-03
60GO:0004047: aminomethyltransferase activity1.05E-03
61GO:0052832: inositol monophosphate 3-phosphatase activity1.05E-03
62GO:0033201: alpha-1,4-glucan synthase activity1.05E-03
63GO:0003844: 1,4-alpha-glucan branching enzyme activity1.05E-03
64GO:0008479: queuine tRNA-ribosyltransferase activity1.05E-03
65GO:0043024: ribosomal small subunit binding1.05E-03
66GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.05E-03
67GO:0008934: inositol monophosphate 1-phosphatase activity1.05E-03
68GO:0008728: GTP diphosphokinase activity1.05E-03
69GO:0000234: phosphoethanolamine N-methyltransferase activity1.05E-03
70GO:0052833: inositol monophosphate 4-phosphatase activity1.05E-03
71GO:0050017: L-3-cyanoalanine synthase activity1.05E-03
72GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.05E-03
73GO:0008883: glutamyl-tRNA reductase activity1.05E-03
74GO:0047746: chlorophyllase activity1.05E-03
75GO:0042389: omega-3 fatty acid desaturase activity1.05E-03
76GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.07E-03
77GO:0030234: enzyme regulator activity1.24E-03
78GO:0042802: identical protein binding1.54E-03
79GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.72E-03
80GO:0071917: triose-phosphate transmembrane transporter activity1.72E-03
81GO:0008864: formyltetrahydrofolate deformylase activity1.72E-03
82GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.72E-03
83GO:0019948: SUMO activating enzyme activity1.72E-03
84GO:0010277: chlorophyllide a oxygenase [overall] activity1.72E-03
85GO:0043169: cation binding1.72E-03
86GO:0016992: lipoate synthase activity1.72E-03
87GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.72E-03
88GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.72E-03
89GO:0004565: beta-galactosidase activity1.87E-03
90GO:0005315: inorganic phosphate transmembrane transporter activity1.87E-03
91GO:0051082: unfolded protein binding1.93E-03
92GO:0048027: mRNA 5'-UTR binding2.50E-03
93GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.50E-03
94GO:0005528: FK506 binding2.93E-03
95GO:0001053: plastid sigma factor activity3.36E-03
96GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.36E-03
97GO:0008453: alanine-glyoxylate transaminase activity3.36E-03
98GO:0016987: sigma factor activity3.36E-03
99GO:0015098: molybdate ion transmembrane transporter activity3.36E-03
100GO:0015120: phosphoglycerate transmembrane transporter activity3.36E-03
101GO:0022891: substrate-specific transmembrane transporter activity4.25E-03
102GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen4.31E-03
103GO:0003727: single-stranded RNA binding4.62E-03
104GO:0004029: aldehyde dehydrogenase (NAD) activity5.34E-03
105GO:0004130: cytochrome-c peroxidase activity5.34E-03
106GO:0035673: oligopeptide transmembrane transporter activity5.34E-03
107GO:0016615: malate dehydrogenase activity5.34E-03
108GO:0042578: phosphoric ester hydrolase activity5.34E-03
109GO:0004124: cysteine synthase activity6.44E-03
110GO:0004849: uridine kinase activity6.44E-03
111GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.44E-03
112GO:0030060: L-malate dehydrogenase activity6.44E-03
113GO:0003886: DNA (cytosine-5-)-methyltransferase activity6.44E-03
114GO:0004518: nuclease activity7.72E-03
115GO:0004033: aldo-keto reductase (NADP) activity8.87E-03
116GO:0005515: protein binding9.26E-03
117GO:0008135: translation factor activity, RNA binding1.02E-02
118GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism1.16E-02
119GO:0016887: ATPase activity1.36E-02
120GO:0004222: metalloendopeptidase activity1.52E-02
121GO:0042803: protein homodimerization activity1.69E-02
122GO:0003746: translation elongation factor activity1.74E-02
123GO:0015198: oligopeptide transporter activity1.78E-02
124GO:0004089: carbonate dehydratase activity1.94E-02
125GO:0004364: glutathione transferase activity2.16E-02
126GO:0004185: serine-type carboxypeptidase activity2.25E-02
127GO:0009055: electron carrier activity2.40E-02
128GO:0051537: 2 iron, 2 sulfur cluster binding2.44E-02
129GO:0043621: protein self-association2.44E-02
130GO:0015293: symporter activity2.53E-02
131GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.63E-02
132GO:0051536: iron-sulfur cluster binding2.67E-02
133GO:0005507: copper ion binding3.11E-02
134GO:0003690: double-stranded DNA binding3.14E-02
135GO:0016760: cellulose synthase (UDP-forming) activity3.48E-02
136GO:0008514: organic anion transmembrane transporter activity3.70E-02
137GO:0016787: hydrolase activity3.89E-02
138GO:0047134: protein-disulfide reductase activity3.91E-02
139GO:0008080: N-acetyltransferase activity4.36E-02
140GO:0046933: proton-transporting ATP synthase activity, rotational mechanism4.36E-02
141GO:0003729: mRNA binding4.50E-02
142GO:0004791: thioredoxin-disulfide reductase activity4.59E-02
143GO:0050662: coenzyme binding4.59E-02
144GO:0004872: receptor activity4.83E-02
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Gene type



Gene DE type