GO Enrichment Analysis of Co-expressed Genes with
AT2G42955
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 2 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 3 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 4 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 5 | GO:0080127: fruit septum development | 0.00E+00 |
| 6 | GO:0000025: maltose catabolic process | 5.79E-05 |
| 7 | GO:0033206: meiotic cytokinesis | 5.79E-05 |
| 8 | GO:0006364: rRNA processing | 1.25E-04 |
| 9 | GO:1901529: positive regulation of anion channel activity | 1.41E-04 |
| 10 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 2.40E-04 |
| 11 | GO:0010501: RNA secondary structure unwinding | 2.90E-04 |
| 12 | GO:0033169: histone H3-K9 demethylation | 3.49E-04 |
| 13 | GO:0009102: biotin biosynthetic process | 3.49E-04 |
| 14 | GO:0007276: gamete generation | 3.49E-04 |
| 15 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.49E-04 |
| 16 | GO:0006808: regulation of nitrogen utilization | 4.66E-04 |
| 17 | GO:0016123: xanthophyll biosynthetic process | 5.92E-04 |
| 18 | GO:0016120: carotene biosynthetic process | 5.92E-04 |
| 19 | GO:0048497: maintenance of floral organ identity | 5.92E-04 |
| 20 | GO:0003006: developmental process involved in reproduction | 7.24E-04 |
| 21 | GO:0009643: photosynthetic acclimation | 7.24E-04 |
| 22 | GO:0010310: regulation of hydrogen peroxide metabolic process | 8.63E-04 |
| 23 | GO:2000033: regulation of seed dormancy process | 8.63E-04 |
| 24 | GO:1900056: negative regulation of leaf senescence | 1.01E-03 |
| 25 | GO:0006401: RNA catabolic process | 1.01E-03 |
| 26 | GO:0042255: ribosome assembly | 1.16E-03 |
| 27 | GO:0006353: DNA-templated transcription, termination | 1.16E-03 |
| 28 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.16E-03 |
| 29 | GO:0006402: mRNA catabolic process | 1.16E-03 |
| 30 | GO:0010492: maintenance of shoot apical meristem identity | 1.16E-03 |
| 31 | GO:0009827: plant-type cell wall modification | 1.32E-03 |
| 32 | GO:0010233: phloem transport | 1.32E-03 |
| 33 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.32E-03 |
| 34 | GO:0032544: plastid translation | 1.32E-03 |
| 35 | GO:0007389: pattern specification process | 1.32E-03 |
| 36 | GO:0048507: meristem development | 1.48E-03 |
| 37 | GO:0000373: Group II intron splicing | 1.48E-03 |
| 38 | GO:0048589: developmental growth | 1.48E-03 |
| 39 | GO:0006397: mRNA processing | 1.63E-03 |
| 40 | GO:0031425: chloroplast RNA processing | 1.65E-03 |
| 41 | GO:0006949: syncytium formation | 1.83E-03 |
| 42 | GO:0006535: cysteine biosynthetic process from serine | 1.83E-03 |
| 43 | GO:0016441: posttranscriptional gene silencing | 1.83E-03 |
| 44 | GO:0009740: gibberellic acid mediated signaling pathway | 2.02E-03 |
| 45 | GO:0009750: response to fructose | 2.02E-03 |
| 46 | GO:0048765: root hair cell differentiation | 2.02E-03 |
| 47 | GO:0012501: programmed cell death | 2.21E-03 |
| 48 | GO:0005983: starch catabolic process | 2.21E-03 |
| 49 | GO:0010582: floral meristem determinacy | 2.21E-03 |
| 50 | GO:0010152: pollen maturation | 2.21E-03 |
| 51 | GO:0010588: cotyledon vascular tissue pattern formation | 2.41E-03 |
| 52 | GO:0006006: glucose metabolic process | 2.41E-03 |
| 53 | GO:0048467: gynoecium development | 2.62E-03 |
| 54 | GO:0006270: DNA replication initiation | 2.62E-03 |
| 55 | GO:0009887: animal organ morphogenesis | 2.62E-03 |
| 56 | GO:0019344: cysteine biosynthetic process | 3.26E-03 |
| 57 | GO:0009863: salicylic acid mediated signaling pathway | 3.26E-03 |
| 58 | GO:0010187: negative regulation of seed germination | 3.26E-03 |
| 59 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.26E-03 |
| 60 | GO:0030245: cellulose catabolic process | 3.95E-03 |
| 61 | GO:0009739: response to gibberellin | 4.11E-03 |
| 62 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.20E-03 |
| 63 | GO:0048443: stamen development | 4.44E-03 |
| 64 | GO:0010091: trichome branching | 4.44E-03 |
| 65 | GO:0042127: regulation of cell proliferation | 4.44E-03 |
| 66 | GO:0042335: cuticle development | 4.95E-03 |
| 67 | GO:0080022: primary root development | 4.95E-03 |
| 68 | GO:0008033: tRNA processing | 4.95E-03 |
| 69 | GO:0010087: phloem or xylem histogenesis | 4.95E-03 |
| 70 | GO:0010305: leaf vascular tissue pattern formation | 5.21E-03 |
| 71 | GO:0009793: embryo development ending in seed dormancy | 5.48E-03 |
| 72 | GO:0009749: response to glucose | 5.75E-03 |
| 73 | GO:0080156: mitochondrial mRNA modification | 6.02E-03 |
| 74 | GO:0031047: gene silencing by RNA | 6.31E-03 |
| 75 | GO:0032502: developmental process | 6.31E-03 |
| 76 | GO:0030163: protein catabolic process | 6.59E-03 |
| 77 | GO:0019760: glucosinolate metabolic process | 6.88E-03 |
| 78 | GO:0009828: plant-type cell wall loosening | 6.88E-03 |
| 79 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.26E-03 |
| 80 | GO:0010029: regulation of seed germination | 8.08E-03 |
| 81 | GO:0015995: chlorophyll biosynthetic process | 8.71E-03 |
| 82 | GO:0016311: dephosphorylation | 9.03E-03 |
| 83 | GO:0010218: response to far red light | 1.00E-02 |
| 84 | GO:0009867: jasmonic acid mediated signaling pathway | 1.11E-02 |
| 85 | GO:0051707: response to other organism | 1.32E-02 |
| 86 | GO:0009744: response to sucrose | 1.32E-02 |
| 87 | GO:0006260: DNA replication | 1.51E-02 |
| 88 | GO:0042538: hyperosmotic salinity response | 1.55E-02 |
| 89 | GO:0009664: plant-type cell wall organization | 1.55E-02 |
| 90 | GO:0048367: shoot system development | 1.88E-02 |
| 91 | GO:0009624: response to nematode | 2.10E-02 |
| 92 | GO:0006355: regulation of transcription, DNA-templated | 2.90E-02 |
| 93 | GO:0016036: cellular response to phosphate starvation | 2.94E-02 |
| 94 | GO:0040008: regulation of growth | 2.99E-02 |
| 95 | GO:0009451: RNA modification | 3.15E-02 |
| 96 | GO:0006468: protein phosphorylation | 3.34E-02 |
| 97 | GO:0006470: protein dephosphorylation | 3.40E-02 |
| 98 | GO:0007166: cell surface receptor signaling pathway | 3.40E-02 |
| 99 | GO:0008380: RNA splicing | 3.51E-02 |
| 100 | GO:0009826: unidimensional cell growth | 4.11E-02 |
| 101 | GO:0009658: chloroplast organization | 4.22E-02 |
| 102 | GO:0007049: cell cycle | 4.57E-02 |
| 103 | GO:0009723: response to ethylene | 4.68E-02 |
| 104 | GO:0080167: response to karrikin | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 2 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 3 | GO:0004134: 4-alpha-glucanotransferase activity | 5.79E-05 |
| 4 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 5.79E-05 |
| 5 | GO:0032454: histone demethylase activity (H3-K9 specific) | 1.41E-04 |
| 6 | GO:0010011: auxin binding | 4.66E-04 |
| 7 | GO:0004004: ATP-dependent RNA helicase activity | 6.49E-04 |
| 8 | GO:0003688: DNA replication origin binding | 7.24E-04 |
| 9 | GO:0004124: cysteine synthase activity | 8.63E-04 |
| 10 | GO:0003723: RNA binding | 8.99E-04 |
| 11 | GO:0003724: RNA helicase activity | 1.32E-03 |
| 12 | GO:0043565: sequence-specific DNA binding | 1.36E-03 |
| 13 | GO:0000989: transcription factor activity, transcription factor binding | 1.48E-03 |
| 14 | GO:0031490: chromatin DNA binding | 1.65E-03 |
| 15 | GO:0003779: actin binding | 2.08E-03 |
| 16 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 2.21E-03 |
| 17 | GO:0008026: ATP-dependent helicase activity | 2.27E-03 |
| 18 | GO:0008289: lipid binding | 2.35E-03 |
| 19 | GO:0000175: 3'-5'-exoribonuclease activity | 2.41E-03 |
| 20 | GO:0003725: double-stranded RNA binding | 2.41E-03 |
| 21 | GO:0019843: rRNA binding | 2.67E-03 |
| 22 | GO:0004190: aspartic-type endopeptidase activity | 2.82E-03 |
| 23 | GO:0030170: pyridoxal phosphate binding | 2.96E-03 |
| 24 | GO:0008810: cellulase activity | 4.20E-03 |
| 25 | GO:0003727: single-stranded RNA binding | 4.44E-03 |
| 26 | GO:0016791: phosphatase activity | 6.88E-03 |
| 27 | GO:0004722: protein serine/threonine phosphatase activity | 9.22E-03 |
| 28 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.01E-02 |
| 29 | GO:0004519: endonuclease activity | 1.13E-02 |
| 30 | GO:0003993: acid phosphatase activity | 1.14E-02 |
| 31 | GO:0003676: nucleic acid binding | 1.31E-02 |
| 32 | GO:0043621: protein self-association | 1.40E-02 |
| 33 | GO:0016298: lipase activity | 1.67E-02 |
| 34 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.70E-02 |
| 35 | GO:0005524: ATP binding | 2.83E-02 |
| 36 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.94E-02 |
| 37 | GO:0008168: methyltransferase activity | 4.11E-02 |
| 38 | GO:0000287: magnesium ion binding | 4.17E-02 |
| 39 | GO:0016788: hydrolase activity, acting on ester bonds | 4.28E-02 |
| 40 | GO:0008233: peptidase activity | 4.86E-02 |