Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G42690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:1904277: negative regulation of wax biosynthetic process0.00E+00
3GO:0009583: detection of light stimulus0.00E+00
4GO:1901698: response to nitrogen compound0.00E+00
5GO:0009638: phototropism2.74E-05
6GO:0010480: microsporocyte differentiation4.04E-05
7GO:0072387: flavin adenine dinucleotide metabolic process4.04E-05
8GO:0051013: microtubule severing4.04E-05
9GO:0010075: regulation of meristem growth5.43E-05
10GO:0010617: circadian regulation of calcium ion oscillation1.00E-04
11GO:0000256: allantoin catabolic process1.00E-04
12GO:0099402: plant organ development1.00E-04
13GO:0001736: establishment of planar polarity1.00E-04
14GO:0010343: singlet oxygen-mediated programmed cell death1.00E-04
15GO:1901529: positive regulation of anion channel activity1.00E-04
16GO:0010136: ureide catabolic process1.73E-04
17GO:0051604: protein maturation1.73E-04
18GO:0016050: vesicle organization1.73E-04
19GO:1902448: positive regulation of shade avoidance1.73E-04
20GO:1901672: positive regulation of systemic acquired resistance1.73E-04
21GO:0071705: nitrogen compound transport1.73E-04
22GO:0009958: positive gravitropism1.95E-04
23GO:1901332: negative regulation of lateral root development2.55E-04
24GO:0034059: response to anoxia2.55E-04
25GO:0006145: purine nucleobase catabolic process2.55E-04
26GO:1902347: response to strigolactone3.43E-04
27GO:0071249: cellular response to nitrate3.43E-04
28GO:0010117: photoprotection4.37E-04
29GO:0046283: anthocyanin-containing compound metabolic process4.37E-04
30GO:0009723: response to ethylene4.91E-04
31GO:0010218: response to far red light5.04E-04
32GO:0060918: auxin transport5.37E-04
33GO:0006596: polyamine biosynthetic process5.37E-04
34GO:0048759: xylem vessel member cell differentiation5.37E-04
35GO:0009959: negative gravitropism5.37E-04
36GO:1901371: regulation of leaf morphogenesis5.37E-04
37GO:0010310: regulation of hydrogen peroxide metabolic process6.40E-04
38GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.40E-04
39GO:0010114: response to red light7.35E-04
40GO:0009926: auxin polar transport7.35E-04
41GO:0051510: regulation of unidimensional cell growth7.49E-04
42GO:0010161: red light signaling pathway7.49E-04
43GO:0048437: floral organ development7.49E-04
44GO:0009850: auxin metabolic process8.61E-04
45GO:0070413: trehalose metabolism in response to stress8.61E-04
46GO:0010100: negative regulation of photomorphogenesis9.77E-04
47GO:0010099: regulation of photomorphogenesis9.77E-04
48GO:0006783: heme biosynthetic process1.10E-03
49GO:1900426: positive regulation of defense response to bacterium1.22E-03
50GO:0048829: root cap development1.35E-03
51GO:0006995: cellular response to nitrogen starvation1.35E-03
52GO:0048229: gametophyte development1.49E-03
53GO:0048765: root hair cell differentiation1.49E-03
54GO:0015706: nitrate transport1.63E-03
55GO:0009785: blue light signaling pathway1.77E-03
56GO:0009934: regulation of meristem structural organization1.92E-03
57GO:0090351: seedling development2.07E-03
58GO:0009825: multidimensional cell growth2.07E-03
59GO:0010167: response to nitrate2.07E-03
60GO:2000377: regulation of reactive oxygen species metabolic process2.39E-03
61GO:0005992: trehalose biosynthetic process2.39E-03
62GO:0010187: negative regulation of seed germination2.39E-03
63GO:0043622: cortical microtubule organization2.55E-03
64GO:0003333: amino acid transmembrane transport2.72E-03
65GO:0010017: red or far-red light signaling pathway2.89E-03
66GO:0009686: gibberellin biosynthetic process3.06E-03
67GO:0010091: trichome branching3.24E-03
68GO:0010087: phloem or xylem histogenesis3.61E-03
69GO:0010118: stomatal movement3.61E-03
70GO:0048653: anther development3.61E-03
71GO:0000226: microtubule cytoskeleton organization3.61E-03
72GO:0007018: microtubule-based movement3.99E-03
73GO:0042752: regulation of circadian rhythm3.99E-03
74GO:0009646: response to absence of light3.99E-03
75GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.57E-03
76GO:0032502: developmental process4.58E-03
77GO:0071281: cellular response to iron ion4.79E-03
78GO:0019760: glucosinolate metabolic process5.00E-03
79GO:0010029: regulation of seed germination5.86E-03
80GO:0015995: chlorophyll biosynthetic process6.31E-03
81GO:0018298: protein-chromophore linkage6.77E-03
82GO:0009832: plant-type cell wall biogenesis7.01E-03
83GO:0010311: lateral root formation7.01E-03
84GO:0006865: amino acid transport7.74E-03
85GO:0009637: response to blue light7.99E-03
86GO:0009873: ethylene-activated signaling pathway8.40E-03
87GO:0006897: endocytosis9.01E-03
88GO:0009734: auxin-activated signaling pathway9.16E-03
89GO:0009640: photomorphogenesis9.53E-03
90GO:0009644: response to high light intensity1.01E-02
91GO:0007165: signal transduction1.09E-02
92GO:0031347: regulation of defense response1.09E-02
93GO:0009416: response to light stimulus1.16E-02
94GO:0009585: red, far-red light phototransduction1.18E-02
95GO:0009740: gibberellic acid mediated signaling pathway1.45E-02
96GO:0009624: response to nematode1.51E-02
97GO:0007623: circadian rhythm2.22E-02
98GO:0009414: response to water deprivation2.29E-02
99GO:0071555: cell wall organization2.35E-02
100GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.41E-02
101GO:0030154: cell differentiation2.56E-02
102GO:0009733: response to auxin2.64E-02
103GO:0009826: unidimensional cell growth2.95E-02
104GO:0015031: protein transport2.98E-02
105GO:0080167: response to karrikin3.54E-02
106GO:0046777: protein autophosphorylation3.71E-02
107GO:0006952: defense response3.74E-02
108GO:0009751: response to salicylic acid4.62E-02
109GO:0009753: response to jasmonic acid4.90E-02
RankGO TermAdjusted P value
1GO:0004038: allantoinase activity0.00E+00
2GO:0010487: thermospermine synthase activity0.00E+00
3GO:0052638: indole-3-butyrate beta-glucosyltransferase activity4.04E-05
4GO:0008568: microtubule-severing ATPase activity4.04E-05
5GO:0016768: spermine synthase activity4.04E-05
6GO:0010313: phytochrome binding4.04E-05
7GO:0009882: blue light photoreceptor activity2.55E-04
8GO:0010011: auxin binding3.43E-04
9GO:0010328: auxin influx transmembrane transporter activity3.43E-04
10GO:0043621: protein self-association7.93E-04
11GO:0071949: FAD binding1.10E-03
12GO:0004805: trehalose-phosphatase activity1.35E-03
13GO:0005089: Rho guanyl-nucleotide exchange factor activity1.49E-03
14GO:0000976: transcription regulatory region sequence-specific DNA binding1.63E-03
15GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.92E-03
16GO:0008017: microtubule binding2.43E-03
17GO:0008194: UDP-glycosyltransferase activity2.60E-03
18GO:0033612: receptor serine/threonine kinase binding2.72E-03
19GO:0042802: identical protein binding2.94E-03
20GO:0008270: zinc ion binding4.04E-03
21GO:0016757: transferase activity, transferring glycosyl groups4.80E-03
22GO:0016759: cellulose synthase activity5.00E-03
23GO:0016791: phosphatase activity5.00E-03
24GO:0016301: kinase activity5.50E-03
25GO:0004871: signal transducer activity5.53E-03
26GO:0005096: GTPase activator activity7.01E-03
27GO:0050897: cobalt ion binding7.49E-03
28GO:0003993: acid phosphatase activity8.24E-03
29GO:0004712: protein serine/threonine/tyrosine kinase activity8.49E-03
30GO:0051537: 2 iron, 2 sulfur cluster binding1.01E-02
31GO:0035091: phosphatidylinositol binding1.01E-02
32GO:0015293: symporter activity1.03E-02
33GO:0003777: microtubule motor activity1.26E-02
34GO:0015171: amino acid transmembrane transporter activity1.26E-02
35GO:0080043: quercetin 3-O-glucosyltransferase activity1.41E-02
36GO:0080044: quercetin 7-O-glucosyltransferase activity1.41E-02
37GO:0005515: protein binding1.74E-02
38GO:0005516: calmodulin binding1.74E-02
39GO:0016758: transferase activity, transferring hexosyl groups1.74E-02
40GO:0003700: transcription factor activity, sequence-specific DNA binding2.08E-02
41GO:0044212: transcription regulatory region DNA binding2.35E-02
42GO:0003677: DNA binding2.86E-02
43GO:0043565: sequence-specific DNA binding3.38E-02
44GO:0004672: protein kinase activity3.45E-02
45GO:0061630: ubiquitin protein ligase activity3.67E-02
46GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.02E-02
47GO:0042803: protein homodimerization activity4.16E-02
48GO:0004722: protein serine/threonine phosphatase activity4.30E-02
49GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.34E-02
50GO:0005524: ATP binding4.90E-02
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Gene type



Gene DE type