Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G42320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
2GO:0006480: N-terminal protein amino acid methylation0.00E+00
3GO:2000469: negative regulation of peroxidase activity0.00E+00
4GO:0090706: specification of plant organ position0.00E+00
5GO:2000121: regulation of removal of superoxide radicals0.00E+00
6GO:0007037: vacuolar phosphate transport0.00E+00
7GO:0045176: apical protein localization0.00E+00
8GO:0009750: response to fructose1.72E-05
9GO:0006168: adenine salvage1.90E-05
10GO:0006166: purine ribonucleoside salvage1.90E-05
11GO:1902183: regulation of shoot apical meristem development5.56E-05
12GO:0044209: AMP salvage5.56E-05
13GO:0010158: abaxial cell fate specification5.56E-05
14GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.13E-04
15GO:0007155: cell adhesion1.91E-04
16GO:0010450: inflorescence meristem growth2.20E-04
17GO:1902334: fructose export from vacuole to cytoplasm2.20E-04
18GO:0010362: negative regulation of anion channel activity by blue light2.20E-04
19GO:2000024: regulation of leaf development2.86E-04
20GO:0007154: cell communication4.90E-04
21GO:0010155: regulation of proton transport4.90E-04
22GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole4.90E-04
23GO:0010115: regulation of abscisic acid biosynthetic process4.90E-04
24GO:1900871: chloroplast mRNA modification4.90E-04
25GO:0048527: lateral root development6.00E-04
26GO:0045165: cell fate commitment7.98E-04
27GO:0009405: pathogenesis7.98E-04
28GO:0042753: positive regulation of circadian rhythm8.40E-04
29GO:0009944: polarity specification of adaxial/abaxial axis9.27E-04
30GO:0006164: purine nucleotide biosynthetic process1.14E-03
31GO:0009963: positive regulation of flavonoid biosynthetic process1.14E-03
32GO:1990019: protein storage vacuole organization1.14E-03
33GO:0009647: skotomorphogenesis1.14E-03
34GO:0035428: hexose transmembrane transport1.22E-03
35GO:0051322: anaphase1.51E-03
36GO:0009649: entrainment of circadian clock1.51E-03
37GO:0032366: intracellular sterol transport1.51E-03
38GO:0046323: glucose import1.81E-03
39GO:0009741: response to brassinosteroid1.81E-03
40GO:0010154: fruit development1.81E-03
41GO:0046283: anthocyanin-containing compound metabolic process1.93E-03
42GO:0009904: chloroplast accumulation movement1.93E-03
43GO:0045038: protein import into chloroplast thylakoid membrane1.93E-03
44GO:0034052: positive regulation of plant-type hypersensitive response1.93E-03
45GO:0006544: glycine metabolic process1.93E-03
46GO:0009749: response to glucose2.09E-03
47GO:0048825: cotyledon development2.09E-03
48GO:0009416: response to light stimulus2.15E-03
49GO:0006561: proline biosynthetic process2.38E-03
50GO:0006563: L-serine metabolic process2.38E-03
51GO:0006751: glutathione catabolic process2.38E-03
52GO:0048827: phyllome development2.38E-03
53GO:0000741: karyogamy2.38E-03
54GO:0010583: response to cyclopentenone2.38E-03
55GO:0048280: vesicle fusion with Golgi apparatus2.86E-03
56GO:0009903: chloroplast avoidance movement2.86E-03
57GO:0010189: vitamin E biosynthetic process2.86E-03
58GO:0009088: threonine biosynthetic process2.86E-03
59GO:0009648: photoperiodism2.86E-03
60GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.36E-03
61GO:0030307: positive regulation of cell growth3.36E-03
62GO:0006629: lipid metabolic process3.58E-03
63GO:0048573: photoperiodism, flowering3.78E-03
64GO:0043068: positive regulation of programmed cell death3.90E-03
65GO:0010078: maintenance of root meristem identity3.90E-03
66GO:0007623: circadian rhythm4.18E-03
67GO:0006997: nucleus organization4.47E-03
68GO:0043562: cellular response to nitrogen levels4.47E-03
69GO:0010093: specification of floral organ identity4.47E-03
70GO:0006811: ion transport4.61E-03
71GO:0010119: regulation of stomatal movement4.84E-03
72GO:0006189: 'de novo' IMP biosynthetic process5.06E-03
73GO:0009638: phototropism5.68E-03
74GO:0010018: far-red light signaling pathway5.68E-03
75GO:1900865: chloroplast RNA modification5.68E-03
76GO:0048354: mucilage biosynthetic process involved in seed coat development5.68E-03
77GO:0006631: fatty acid metabolic process6.30E-03
78GO:0009688: abscisic acid biosynthetic process6.32E-03
79GO:0009641: shade avoidance6.32E-03
80GO:0010192: mucilage biosynthetic process6.32E-03
81GO:0006896: Golgi to vacuole transport6.32E-03
82GO:0006995: cellular response to nitrogen starvation6.32E-03
83GO:0009744: response to sucrose6.83E-03
84GO:0009684: indoleacetic acid biosynthetic process6.98E-03
85GO:0010229: inflorescence development8.39E-03
86GO:0009767: photosynthetic electron transport chain8.39E-03
87GO:0006829: zinc II ion transport8.39E-03
88GO:0010588: cotyledon vascular tissue pattern formation8.39E-03
89GO:0009785: blue light signaling pathway8.39E-03
90GO:0009887: animal organ morphogenesis9.13E-03
91GO:0010540: basipetal auxin transport9.13E-03
92GO:0048467: gynoecium development9.13E-03
93GO:0006541: glutamine metabolic process9.13E-03
94GO:0009933: meristem structural organization9.13E-03
95GO:0009585: red, far-red light phototransduction9.22E-03
96GO:0009825: multidimensional cell growth9.90E-03
97GO:0009909: regulation of flower development1.02E-02
98GO:0000162: tryptophan biosynthetic process1.07E-02
99GO:0048367: shoot system development1.13E-02
100GO:0000027: ribosomal large subunit assembly1.15E-02
101GO:0007010: cytoskeleton organization1.15E-02
102GO:0007017: microtubule-based process1.23E-02
103GO:0051260: protein homooligomerization1.32E-02
104GO:0048511: rhythmic process1.32E-02
105GO:0019915: lipid storage1.32E-02
106GO:0009814: defense response, incompatible interaction1.40E-02
107GO:0051726: regulation of cell cycle1.40E-02
108GO:0009294: DNA mediated transformation1.49E-02
109GO:0071215: cellular response to abscisic acid stimulus1.49E-02
110GO:0042147: retrograde transport, endosome to Golgi1.68E-02
111GO:0000271: polysaccharide biosynthetic process1.77E-02
112GO:0080022: primary root development1.77E-02
113GO:0010087: phloem or xylem histogenesis1.77E-02
114GO:0010197: polar nucleus fusion1.87E-02
115GO:0010182: sugar mediated signaling pathway1.87E-02
116GO:0045489: pectin biosynthetic process1.87E-02
117GO:0009958: positive gravitropism1.87E-02
118GO:0006520: cellular amino acid metabolic process1.87E-02
119GO:0007018: microtubule-based movement1.97E-02
120GO:0009646: response to absence of light1.97E-02
121GO:0008654: phospholipid biosynthetic process2.07E-02
122GO:0009851: auxin biosynthetic process2.07E-02
123GO:0006623: protein targeting to vacuole2.07E-02
124GO:0006891: intra-Golgi vesicle-mediated transport2.17E-02
125GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.17E-02
126GO:0071554: cell wall organization or biogenesis2.17E-02
127GO:0045490: pectin catabolic process2.28E-02
128GO:0010228: vegetative to reproductive phase transition of meristem2.39E-02
129GO:0006464: cellular protein modification process2.49E-02
130GO:0010252: auxin homeostasis2.49E-02
131GO:0009639: response to red or far red light2.49E-02
132GO:0000910: cytokinesis2.71E-02
133GO:0009617: response to bacterium2.72E-02
134GO:0009911: positive regulation of flower development2.82E-02
135GO:0006888: ER to Golgi vesicle-mediated transport3.17E-02
136GO:0018298: protein-chromophore linkage3.41E-02
137GO:0000160: phosphorelay signal transduction system3.53E-02
138GO:0007049: cell cycle3.93E-02
139GO:0016051: carbohydrate biosynthetic process4.03E-02
140GO:0009637: response to blue light4.03E-02
141GO:0009853: photorespiration4.03E-02
142GO:0009723: response to ethylene4.07E-02
143GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.51E-02
144GO:0051707: response to other organism4.83E-02
145GO:0009640: photomorphogenesis4.83E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
3GO:1990534: thermospermine oxidase activity0.00E+00
4GO:0022883: zinc efflux transmembrane transporter activity0.00E+00
5GO:0010301: xanthoxin dehydrogenase activity0.00E+00
6GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
7GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
8GO:0003999: adenine phosphoribosyltransferase activity1.90E-05
9GO:0000293: ferric-chelate reductase activity8.18E-05
10GO:0005355: glucose transmembrane transporter activity1.76E-04
11GO:0019210: kinase inhibitor activity2.20E-04
12GO:0004328: formamidase activity2.20E-04
13GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.20E-04
14GO:0004795: threonine synthase activity2.20E-04
15GO:0005353: fructose transmembrane transporter activity4.90E-04
16GO:0017118: lipoyltransferase activity4.90E-04
17GO:0003839: gamma-glutamylcyclotransferase activity4.90E-04
18GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity4.90E-04
19GO:0015929: hexosaminidase activity4.90E-04
20GO:0004563: beta-N-acetylhexosaminidase activity4.90E-04
21GO:0080097: L-tryptophan:pyruvate aminotransferase activity4.90E-04
22GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity7.98E-04
23GO:0004049: anthranilate synthase activity7.98E-04
24GO:0090729: toxin activity7.98E-04
25GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.14E-03
26GO:0009882: blue light photoreceptor activity1.14E-03
27GO:0030570: pectate lyase activity1.33E-03
28GO:0080032: methyl jasmonate esterase activity1.51E-03
29GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.93E-03
30GO:0016846: carbon-sulfur lyase activity1.93E-03
31GO:0004372: glycine hydroxymethyltransferase activity1.93E-03
32GO:0019901: protein kinase binding2.09E-03
33GO:0004605: phosphatidate cytidylyltransferase activity2.38E-03
34GO:0051753: mannan synthase activity2.86E-03
35GO:0005338: nucleotide-sugar transmembrane transporter activity3.36E-03
36GO:0003872: 6-phosphofructokinase activity3.36E-03
37GO:0030247: polysaccharide binding3.78E-03
38GO:0008017: microtubule binding4.43E-03
39GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity4.47E-03
40GO:0103095: wax ester synthase activity4.47E-03
41GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.61E-03
42GO:0042802: identical protein binding5.67E-03
43GO:0047372: acylglycerol lipase activity6.98E-03
44GO:0008515: sucrose transmembrane transporter activity6.98E-03
45GO:0000976: transcription regulatory region sequence-specific DNA binding7.68E-03
46GO:0008081: phosphoric diester hydrolase activity8.39E-03
47GO:0004022: alcohol dehydrogenase (NAD) activity8.39E-03
48GO:0000155: phosphorelay sensor kinase activity8.39E-03
49GO:0008131: primary amine oxidase activity9.13E-03
50GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.13E-03
51GO:0008146: sulfotransferase activity9.90E-03
52GO:0051119: sugar transmembrane transporter activity9.90E-03
53GO:0003777: microtubule motor activity1.02E-02
54GO:0005528: FK506 binding1.15E-02
55GO:0016491: oxidoreductase activity1.19E-02
56GO:0016874: ligase activity1.24E-02
57GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.40E-02
58GO:0016829: lyase activity1.79E-02
59GO:0001085: RNA polymerase II transcription factor binding1.87E-02
60GO:0010181: FMN binding1.97E-02
61GO:0015144: carbohydrate transmembrane transporter activity1.98E-02
62GO:0005351: sugar:proton symporter activity2.23E-02
63GO:0016722: oxidoreductase activity, oxidizing metal ions2.60E-02
64GO:0016413: O-acetyltransferase activity2.71E-02
65GO:0046872: metal ion binding2.81E-02
66GO:0004721: phosphoprotein phosphatase activity3.17E-02
67GO:0030145: manganese ion binding3.78E-02
68GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.78E-02
69GO:0050897: cobalt ion binding3.78E-02
70GO:0000149: SNARE binding4.30E-02
71GO:0004672: protein kinase activity4.32E-02
72GO:0061630: ubiquitin protein ligase activity4.58E-02
73GO:0005484: SNAP receptor activity4.83E-02
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Gene type



Gene DE type