GO Enrichment Analysis of Co-expressed Genes with
AT2G41840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 2 | GO:0033206: meiotic cytokinesis | 0.00E+00 |
| 3 | GO:2000033: regulation of seed dormancy process | 1.03E-06 |
| 4 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.96E-06 |
| 5 | GO:0048016: inositol phosphate-mediated signaling | 1.21E-05 |
| 6 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.56E-05 |
| 7 | GO:0009863: salicylic acid mediated signaling pathway | 1.56E-05 |
| 8 | GO:0010187: negative regulation of seed germination | 1.56E-05 |
| 9 | GO:0010029: regulation of seed germination | 7.63E-05 |
| 10 | GO:0033169: histone H3-K9 demethylation | 8.79E-05 |
| 11 | GO:0010218: response to far red light | 1.08E-04 |
| 12 | GO:0006808: regulation of nitrogen utilization | 1.22E-04 |
| 13 | GO:0009867: jasmonic acid mediated signaling pathway | 1.25E-04 |
| 14 | GO:0032957: inositol trisphosphate metabolic process | 1.59E-04 |
| 15 | GO:0009643: photosynthetic acclimation | 1.98E-04 |
| 16 | GO:0042176: regulation of protein catabolic process | 1.98E-04 |
| 17 | GO:0046855: inositol phosphate dephosphorylation | 1.98E-04 |
| 18 | GO:0042538: hyperosmotic salinity response | 2.10E-04 |
| 19 | GO:0009737: response to abscisic acid | 2.22E-04 |
| 20 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.39E-04 |
| 21 | GO:0010067: procambium histogenesis | 2.39E-04 |
| 22 | GO:0009740: gibberellic acid mediated signaling pathway | 3.04E-04 |
| 23 | GO:0010233: phloem transport | 3.73E-04 |
| 24 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.73E-04 |
| 25 | GO:0000373: Group II intron splicing | 4.21E-04 |
| 26 | GO:0006535: cysteine biosynthetic process from serine | 5.20E-04 |
| 27 | GO:0016441: posttranscriptional gene silencing | 5.20E-04 |
| 28 | GO:0046856: phosphatidylinositol dephosphorylation | 5.71E-04 |
| 29 | GO:0010588: cotyledon vascular tissue pattern formation | 6.76E-04 |
| 30 | GO:0010102: lateral root morphogenesis | 6.76E-04 |
| 31 | GO:0019344: cysteine biosynthetic process | 9.02E-04 |
| 32 | GO:0009723: response to ethylene | 9.60E-04 |
| 33 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.06E-03 |
| 34 | GO:0010501: RNA secondary structure unwinding | 1.34E-03 |
| 35 | GO:0010051: xylem and phloem pattern formation | 1.34E-03 |
| 36 | GO:0010305: leaf vascular tissue pattern formation | 1.40E-03 |
| 37 | GO:0048544: recognition of pollen | 1.47E-03 |
| 38 | GO:0006397: mRNA processing | 1.55E-03 |
| 39 | GO:0031047: gene silencing by RNA | 1.68E-03 |
| 40 | GO:0009734: auxin-activated signaling pathway | 2.07E-03 |
| 41 | GO:0009738: abscisic acid-activated signaling pathway | 2.52E-03 |
| 42 | GO:0006351: transcription, DNA-templated | 2.59E-03 |
| 43 | GO:0006355: regulation of transcription, DNA-templated | 5.82E-03 |
| 44 | GO:0006468: protein phosphorylation | 8.38E-03 |
| 45 | GO:0009739: response to gibberellin | 8.43E-03 |
| 46 | GO:0008380: RNA splicing | 8.82E-03 |
| 47 | GO:0007275: multicellular organism development | 1.03E-02 |
| 48 | GO:0009658: chloroplast organization | 1.06E-02 |
| 49 | GO:0042254: ribosome biogenesis | 1.07E-02 |
| 50 | GO:0007049: cell cycle | 1.14E-02 |
| 51 | GO:0009793: embryo development ending in seed dormancy | 1.21E-02 |
| 52 | GO:0015979: photosynthesis | 1.35E-02 |
| 53 | GO:0045892: negative regulation of transcription, DNA-templated | 1.41E-02 |
| 54 | GO:0009651: response to salt stress | 1.76E-02 |
| 55 | GO:0051301: cell division | 2.60E-02 |
| 56 | GO:0045893: positive regulation of transcription, DNA-templated | 2.69E-02 |
| 57 | GO:0006457: protein folding | 2.94E-02 |
| 58 | GO:0030154: cell differentiation | 4.29E-02 |
| 59 | GO:0009733: response to auxin | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000989: transcription factor activity, transcription factor binding | 3.31E-06 |
| 2 | GO:0046030: inositol trisphosphate phosphatase activity | 1.21E-05 |
| 3 | GO:0032454: histone demethylase activity (H3-K9 specific) | 3.21E-05 |
| 4 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.98E-04 |
| 5 | GO:0004124: cysteine synthase activity | 2.39E-04 |
| 6 | GO:0003724: RNA helicase activity | 3.73E-04 |
| 7 | GO:0031490: chromatin DNA binding | 4.69E-04 |
| 8 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 6.23E-04 |
| 9 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.23E-04 |
| 10 | GO:0004004: ATP-dependent RNA helicase activity | 2.30E-03 |
| 11 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 2.46E-03 |
| 12 | GO:0003690: double-stranded DNA binding | 4.30E-03 |
| 13 | GO:0004674: protein serine/threonine kinase activity | 4.72E-03 |
| 14 | GO:0043565: sequence-specific DNA binding | 4.96E-03 |
| 15 | GO:0008026: ATP-dependent helicase activity | 5.56E-03 |
| 16 | GO:0030170: pyridoxal phosphate binding | 6.70E-03 |
| 17 | GO:0003723: RNA binding | 8.48E-03 |
| 18 | GO:0042803: protein homodimerization activity | 1.45E-02 |
| 19 | GO:0008289: lipid binding | 2.05E-02 |
| 20 | GO:0016301: kinase activity | 2.24E-02 |
| 21 | GO:0016740: transferase activity | 2.81E-02 |
| 22 | GO:0030246: carbohydrate binding | 3.02E-02 |
| 23 | GO:0005515: protein binding | 3.07E-02 |
| 24 | GO:0044212: transcription regulatory region DNA binding | 4.04E-02 |
| 25 | GO:0005215: transporter activity | 4.34E-02 |