GO Enrichment Analysis of Co-expressed Genes with
AT2G40690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 2 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 3 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 4 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 5 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 6 | GO:0046620: regulation of organ growth | 1.36E-06 |
| 7 | GO:0006518: peptide metabolic process | 4.02E-06 |
| 8 | GO:0006364: rRNA processing | 6.44E-05 |
| 9 | GO:0006401: RNA catabolic process | 8.05E-05 |
| 10 | GO:0009733: response to auxin | 2.04E-04 |
| 11 | GO:0006949: syncytium formation | 2.27E-04 |
| 12 | GO:1901529: positive regulation of anion channel activity | 3.38E-04 |
| 13 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.38E-04 |
| 14 | GO:0048731: system development | 3.38E-04 |
| 15 | GO:2000071: regulation of defense response by callose deposition | 3.38E-04 |
| 16 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 5.54E-04 |
| 17 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.15E-04 |
| 18 | GO:0009686: gibberellin biosynthetic process | 7.78E-04 |
| 19 | GO:0008033: tRNA processing | 9.81E-04 |
| 20 | GO:0010305: leaf vascular tissue pattern formation | 1.05E-03 |
| 21 | GO:0080156: mitochondrial mRNA modification | 1.29E-03 |
| 22 | GO:0016123: xanthophyll biosynthetic process | 1.33E-03 |
| 23 | GO:0016120: carotene biosynthetic process | 1.33E-03 |
| 24 | GO:0045487: gibberellin catabolic process | 1.33E-03 |
| 25 | GO:0016131: brassinosteroid metabolic process | 1.33E-03 |
| 26 | GO:0009828: plant-type cell wall loosening | 1.56E-03 |
| 27 | GO:0060918: auxin transport | 1.63E-03 |
| 28 | GO:0042793: transcription from plastid promoter | 1.63E-03 |
| 29 | GO:0040008: regulation of growth | 1.93E-03 |
| 30 | GO:0009942: longitudinal axis specification | 1.96E-03 |
| 31 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.96E-03 |
| 32 | GO:1900056: negative regulation of leaf senescence | 2.30E-03 |
| 33 | GO:0009734: auxin-activated signaling pathway | 2.55E-03 |
| 34 | GO:0048564: photosystem I assembly | 2.66E-03 |
| 35 | GO:0045292: mRNA cis splicing, via spliceosome | 2.66E-03 |
| 36 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.66E-03 |
| 37 | GO:0042255: ribosome assembly | 2.66E-03 |
| 38 | GO:0006353: DNA-templated transcription, termination | 2.66E-03 |
| 39 | GO:0006402: mRNA catabolic process | 2.66E-03 |
| 40 | GO:0007389: pattern specification process | 3.04E-03 |
| 41 | GO:0019430: removal of superoxide radicals | 3.04E-03 |
| 42 | GO:0000373: Group II intron splicing | 3.44E-03 |
| 43 | GO:0048589: developmental growth | 3.44E-03 |
| 44 | GO:0009658: chloroplast organization | 3.56E-03 |
| 45 | GO:1900865: chloroplast RNA modification | 3.86E-03 |
| 46 | GO:0031425: chloroplast RNA processing | 3.86E-03 |
| 47 | GO:0009926: auxin polar transport | 3.90E-03 |
| 48 | GO:0048829: root cap development | 4.29E-03 |
| 49 | GO:0009641: shade avoidance | 4.29E-03 |
| 50 | GO:0016441: posttranscriptional gene silencing | 4.29E-03 |
| 51 | GO:0031347: regulation of defense response | 4.72E-03 |
| 52 | GO:1903507: negative regulation of nucleic acid-templated transcription | 4.73E-03 |
| 53 | GO:0009750: response to fructose | 4.73E-03 |
| 54 | GO:0046856: phosphatidylinositol dephosphorylation | 4.73E-03 |
| 55 | GO:0009682: induced systemic resistance | 4.73E-03 |
| 56 | GO:0009664: plant-type cell wall organization | 4.89E-03 |
| 57 | GO:0012501: programmed cell death | 5.20E-03 |
| 58 | GO:0010152: pollen maturation | 5.20E-03 |
| 59 | GO:0010588: cotyledon vascular tissue pattern formation | 5.68E-03 |
| 60 | GO:0048367: shoot system development | 6.40E-03 |
| 61 | GO:0080188: RNA-directed DNA methylation | 6.67E-03 |
| 62 | GO:0009740: gibberellic acid mediated signaling pathway | 7.03E-03 |
| 63 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.20E-03 |
| 64 | GO:0006863: purine nucleobase transport | 7.20E-03 |
| 65 | GO:2000377: regulation of reactive oxygen species metabolic process | 7.74E-03 |
| 66 | GO:0080147: root hair cell development | 7.74E-03 |
| 67 | GO:0006397: mRNA processing | 8.10E-03 |
| 68 | GO:0019953: sexual reproduction | 8.29E-03 |
| 69 | GO:0003333: amino acid transmembrane transport | 8.85E-03 |
| 70 | GO:0030245: cellulose catabolic process | 9.43E-03 |
| 71 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.00E-02 |
| 72 | GO:0048443: stamen development | 1.06E-02 |
| 73 | GO:0042127: regulation of cell proliferation | 1.06E-02 |
| 74 | GO:0080022: primary root development | 1.19E-02 |
| 75 | GO:0010087: phloem or xylem histogenesis | 1.19E-02 |
| 76 | GO:0010118: stomatal movement | 1.19E-02 |
| 77 | GO:0009741: response to brassinosteroid | 1.25E-02 |
| 78 | GO:0010268: brassinosteroid homeostasis | 1.25E-02 |
| 79 | GO:0071472: cellular response to salt stress | 1.25E-02 |
| 80 | GO:0009451: RNA modification | 1.32E-02 |
| 81 | GO:0009749: response to glucose | 1.39E-02 |
| 82 | GO:0002229: defense response to oomycetes | 1.45E-02 |
| 83 | GO:0032502: developmental process | 1.52E-02 |
| 84 | GO:0010583: response to cyclopentenone | 1.52E-02 |
| 85 | GO:0009416: response to light stimulus | 1.59E-02 |
| 86 | GO:0030163: protein catabolic process | 1.59E-02 |
| 87 | GO:0006464: cellular protein modification process | 1.67E-02 |
| 88 | GO:0009826: unidimensional cell growth | 1.93E-02 |
| 89 | GO:0015995: chlorophyll biosynthetic process | 2.12E-02 |
| 90 | GO:0016311: dephosphorylation | 2.20E-02 |
| 91 | GO:0010218: response to far red light | 2.45E-02 |
| 92 | GO:0006811: ion transport | 2.45E-02 |
| 93 | GO:0080167: response to karrikin | 2.49E-02 |
| 94 | GO:0006865: amino acid transport | 2.61E-02 |
| 95 | GO:0009867: jasmonic acid mediated signaling pathway | 2.70E-02 |
| 96 | GO:0007165: signal transduction | 3.15E-02 |
| 97 | GO:0010114: response to red light | 3.23E-02 |
| 98 | GO:0009744: response to sucrose | 3.23E-02 |
| 99 | GO:0006468: protein phosphorylation | 3.65E-02 |
| 100 | GO:0009793: embryo development ending in seed dormancy | 3.67E-02 |
| 101 | GO:0071555: cell wall organization | 3.84E-02 |
| 102 | GO:0006417: regulation of translation | 4.30E-02 |
| 103 | GO:0048316: seed development | 4.61E-02 |
| 104 | GO:0009620: response to fungus | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 2 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 3 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 4 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 5 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 6 | GO:0008395: steroid hydroxylase activity | 1.48E-04 |
| 7 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 1.48E-04 |
| 8 | GO:0042389: omega-3 fatty acid desaturase activity | 3.38E-04 |
| 9 | GO:0045543: gibberellin 2-beta-dioxygenase activity | 3.38E-04 |
| 10 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 3.38E-04 |
| 11 | GO:0000175: 3'-5'-exoribonuclease activity | 3.47E-04 |
| 12 | GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity | 7.93E-04 |
| 13 | GO:0010011: auxin binding | 1.05E-03 |
| 14 | GO:0010328: auxin influx transmembrane transporter activity | 1.05E-03 |
| 15 | GO:0003968: RNA-directed 5'-3' RNA polymerase activity | 1.63E-03 |
| 16 | GO:0004784: superoxide dismutase activity | 1.63E-03 |
| 17 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.63E-03 |
| 18 | GO:0004519: endonuclease activity | 1.72E-03 |
| 19 | GO:0003723: RNA binding | 2.01E-03 |
| 20 | GO:0004222: metalloendopeptidase activity | 2.65E-03 |
| 21 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.04E-03 |
| 22 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 5.20E-03 |
| 23 | GO:0004190: aspartic-type endopeptidase activity | 6.67E-03 |
| 24 | GO:0003712: transcription cofactor activity | 6.67E-03 |
| 25 | GO:0003714: transcription corepressor activity | 7.74E-03 |
| 26 | GO:0005345: purine nucleobase transmembrane transporter activity | 8.29E-03 |
| 27 | GO:0004540: ribonuclease activity | 8.85E-03 |
| 28 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.61E-03 |
| 29 | GO:0030570: pectate lyase activity | 1.00E-02 |
| 30 | GO:0008810: cellulase activity | 1.00E-02 |
| 31 | GO:0003727: single-stranded RNA binding | 1.06E-02 |
| 32 | GO:0005102: receptor binding | 1.13E-02 |
| 33 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.25E-02 |
| 34 | GO:0016791: phosphatase activity | 1.67E-02 |
| 35 | GO:0005200: structural constituent of cytoskeleton | 1.74E-02 |
| 36 | GO:0004672: protein kinase activity | 1.88E-02 |
| 37 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.20E-02 |
| 38 | GO:0003993: acid phosphatase activity | 2.79E-02 |
| 39 | GO:0042803: protein homodimerization activity | 3.12E-02 |
| 40 | GO:0004722: protein serine/threonine phosphatase activity | 3.27E-02 |
| 41 | GO:0015293: symporter activity | 3.51E-02 |
| 42 | GO:0003690: double-stranded DNA binding | 4.10E-02 |
| 43 | GO:0015171: amino acid transmembrane transporter activity | 4.30E-02 |
| 44 | GO:0016874: ligase activity | 4.92E-02 |