co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061635: regulation of protein complex stability	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:0015979: photosynthesis	2.85E-20
5	GO:0009768: photosynthesis, light harvesting in photosystem I	3.40E-11
6	GO:0090391: granum assembly	3.24E-09
7	GO:0018298: protein-chromophore linkage	4.78E-09
8	GO:0010190: cytochrome b6f complex assembly	2.11E-07
9	GO:0010218: response to far red light	3.12E-07
10	GO:0009637: response to blue light	4.57E-07
11	GO:0010196: nonphotochemical quenching	6.12E-07
12	GO:0009645: response to low light intensity stimulus	6.12E-07
13	GO:0009735: response to cytokinin	6.61E-07
14	GO:0010114: response to red light	9.11E-07
15	GO:0009773: photosynthetic electron transport in photosystem I	4.74E-06
16	GO:0015995: chlorophyll biosynthetic process	7.06E-06
17	GO:0010207: photosystem II assembly	9.46E-06
18	GO:0032544: plastid translation	1.04E-04
19	GO:0080093: regulation of photorespiration	1.27E-04
20	GO:0031998: regulation of fatty acid beta-oxidation	1.27E-04
21	GO:0010206: photosystem II repair	1.28E-04
22	GO:0018119: peptidyl-cysteine S-nitrosylation	2.14E-04
23	GO:0042819: vitamin B6 biosynthetic process	2.94E-04
24	GO:0008616: queuosine biosynthetic process	2.94E-04
25	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.94E-04
26	GO:0019253: reductive pentose-phosphate cycle	3.20E-04
27	GO:0009644: response to high light intensity	3.90E-04
28	GO:0042254: ribosome biogenesis	4.61E-04
29	GO:0006518: peptide metabolic process	4.86E-04
30	GO:0009416: response to light stimulus	5.57E-04
31	GO:0042823: pyridoxal phosphate biosynthetic process	6.95E-04
32	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	6.95E-04
33	GO:0045454: cell redox homeostasis	8.16E-04
34	GO:0006662: glycerol ether metabolic process	8.70E-04
35	GO:0015994: chlorophyll metabolic process	9.21E-04
36	GO:0010600: regulation of auxin biosynthetic process	9.21E-04
37	GO:0006546: glycine catabolic process	9.21E-04
38	GO:0015976: carbon utilization	9.21E-04
39	GO:0019464: glycine decarboxylation via glycine cleavage system	9.21E-04
40	GO:0009765: photosynthesis, light harvesting	9.21E-04
41	GO:0006810: transport	9.79E-04
42	GO:0006656: phosphatidylcholine biosynthetic process	1.16E-03
43	GO:0043097: pyrimidine nucleoside salvage	1.16E-03
44	GO:0006097: glyoxylate cycle	1.16E-03
45	GO:0009107: lipoate biosynthetic process	1.16E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	1.43E-03
47	GO:0050665: hydrogen peroxide biosynthetic process	1.43E-03
48	GO:0010027: thylakoid membrane organization	1.51E-03
49	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.71E-03
50	GO:0009854: oxidative photosynthetic carbon pathway	1.71E-03
51	GO:0009769: photosynthesis, light harvesting in photosystem II	2.01E-03
52	GO:0010928: regulation of auxin mediated signaling pathway	2.32E-03
53	GO:0009642: response to light intensity	2.32E-03
54	GO:0034599: cellular response to oxidative stress	2.59E-03
55	GO:0022900: electron transport chain	2.65E-03
56	GO:0009658: chloroplast organization	2.75E-03
57	GO:0009245: lipid A biosynthetic process	3.00E-03
58	GO:0006783: heme biosynthetic process	3.00E-03
59	GO:0009409: response to cold	3.25E-03
60	GO:0006779: porphyrin-containing compound biosynthetic process	3.36E-03
61	GO:0080167: response to karrikin	3.61E-03
62	GO:0006782: protoporphyrinogen IX biosynthetic process	3.73E-03
63	GO:0006412: translation	3.96E-03
64	GO:0009698: phenylpropanoid metabolic process	4.12E-03
65	GO:0043085: positive regulation of catalytic activity	4.12E-03
66	GO:0006108: malate metabolic process	4.93E-03
67	GO:0006006: glucose metabolic process	4.93E-03
68	GO:0009767: photosynthetic electron transport chain	4.93E-03
69	GO:0007031: peroxisome organization	5.80E-03
70	GO:0009269: response to desiccation	7.68E-03
71	GO:0042742: defense response to bacterium	7.74E-03
72	GO:0007005: mitochondrion organization	8.18E-03
73	GO:0009693: ethylene biosynthetic process	8.69E-03
74	GO:0006633: fatty acid biosynthetic process	9.58E-03
75	GO:0042335: cuticle development	1.03E-02
76	GO:0000413: protein peptidyl-prolyl isomerization	1.03E-02
77	GO:0006814: sodium ion transport	1.14E-02
78	GO:0009646: response to absence of light	1.14E-02
79	GO:0010193: response to ozone	1.26E-02
80	GO:0010583: response to cyclopentenone	1.32E-02
81	GO:0055114: oxidation-reduction process	1.63E-02
82	GO:0009627: systemic acquired resistance	1.77E-02
83	GO:0016311: dephosphorylation	1.90E-02
84	GO:0007568: aging	2.19E-02
85	GO:0009853: photorespiration	2.33E-02
86	GO:0006099: tricarboxylic acid cycle	2.41E-02
87	GO:0006812: cation transport	3.29E-02
88	GO:0009585: red, far-red light phototransduction	3.46E-02
89	GO:0010224: response to UV-B	3.54E-02
90	GO:0043086: negative regulation of catalytic activity	3.89E-02
91	GO:0006096: glycolytic process	3.89E-02
92	GO:0009624: response to nematode	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
2	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
3	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
4	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
5	GO:0008974: phosphoribulokinase activity	0.00E+00
6	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
7	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
8	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
9	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
10	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
11	GO:0031409: pigment binding	1.63E-11
12	GO:0016168: chlorophyll binding	2.37E-09
13	GO:0009374: biotin binding	1.27E-04
14	GO:0008479: queuine tRNA-ribosyltransferase activity	2.94E-04
15	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.94E-04
16	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	2.94E-04
17	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.94E-04
18	GO:0016630: protochlorophyllide reductase activity	2.94E-04
19	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.94E-04
20	GO:0008883: glutamyl-tRNA reductase activity	2.94E-04
21	GO:0047746: chlorophyllase activity	2.94E-04
22	GO:0051537: 2 iron, 2 sulfur cluster binding	3.90E-04
23	GO:0003735: structural constituent of ribosome	4.82E-04
24	GO:0016992: lipoate synthase activity	4.86E-04
25	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.86E-04
26	GO:0004375: glycine dehydrogenase (decarboxylating) activity	6.95E-04
27	GO:0016851: magnesium chelatase activity	6.95E-04
28	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	6.95E-04
29	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	6.95E-04
30	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	6.95E-04
31	GO:0047134: protein-disulfide reductase activity	7.51E-04
32	GO:0015035: protein disulfide oxidoreductase activity	8.35E-04
33	GO:0008453: alanine-glyoxylate transaminase activity	9.21E-04
34	GO:0052793: pectin acetylesterase activity	9.21E-04
35	GO:0008891: glycolate oxidase activity	9.21E-04
36	GO:0004791: thioredoxin-disulfide reductase activity	9.31E-04
37	GO:0048038: quinone binding	1.06E-03
38	GO:0019843: rRNA binding	1.06E-03
39	GO:0003989: acetyl-CoA carboxylase activity	1.16E-03
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.20E-03
41	GO:0009055: electron carrier activity	1.24E-03
42	GO:0031177: phosphopantetheine binding	1.43E-03
43	GO:0016615: malate dehydrogenase activity	1.43E-03
44	GO:0030060: L-malate dehydrogenase activity	1.71E-03
45	GO:0004849: uridine kinase activity	1.71E-03
46	GO:0000035: acyl binding	1.71E-03
47	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.32E-03
48	GO:0050661: NADP binding	2.82E-03
49	GO:0016491: oxidoreductase activity	3.09E-03
50	GO:0030234: enzyme regulator activity	3.73E-03
51	GO:0008047: enzyme activator activity	3.73E-03
52	GO:0005315: inorganic phosphate transmembrane transporter activity	4.93E-03
53	GO:0004089: carbonate dehydratase activity	4.93E-03
54	GO:0031072: heat shock protein binding	4.93E-03
55	GO:0046872: metal ion binding	5.38E-03
56	GO:0043424: protein histidine kinase binding	7.19E-03
57	GO:0003756: protein disulfide isomerase activity	9.21E-03
58	GO:0008514: organic anion transmembrane transporter activity	9.21E-03
59	GO:0010181: FMN binding	1.14E-02
60	GO:0016853: isomerase activity	1.14E-02
61	GO:0016791: phosphatase activity	1.44E-02
62	GO:0043531: ADP binding	1.79E-02
63	GO:0004721: phosphoprotein phosphatase activity	1.83E-02
64	GO:0005515: protein binding	2.08E-02
65	GO:0004222: metalloendopeptidase activity	2.11E-02
66	GO:0030145: manganese ion binding	2.19E-02
67	GO:0003993: acid phosphatase activity	2.41E-02
68	GO:0042803: protein homodimerization activity	2.55E-02
69	GO:0004185: serine-type carboxypeptidase activity	2.80E-02
70	GO:0015293: symporter activity	3.04E-02
71	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.12E-02
72	GO:0051287: NAD binding	3.20E-02
73	GO:0051082: unfolded protein binding	4.44E-02