co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39280

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090322: regulation of superoxide metabolic process	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0019988: charged-tRNA amino acid modification	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0080009: mRNA methylation	1.23E-04
6	GO:0006518: peptide metabolic process	2.11E-04
7	GO:0009733: response to auxin	2.50E-04
8	GO:0010305: leaf vascular tissue pattern formation	2.60E-04
9	GO:0033169: histone H3-K9 demethylation	3.09E-04
10	GO:0006221: pyrimidine nucleotide biosynthetic process	4.15E-04
11	GO:0009956: radial pattern formation	4.15E-04
12	GO:0006479: protein methylation	4.15E-04
13	GO:0080110: sporopollenin biosynthetic process	5.26E-04
14	GO:0003006: developmental process involved in reproduction	6.44E-04
15	GO:0009643: photosynthetic acclimation	6.44E-04
16	GO:0016554: cytidine to uridine editing	6.44E-04
17	GO:0010310: regulation of hydrogen peroxide metabolic process	7.68E-04
18	GO:0048507: meristem development	1.32E-03
19	GO:0048589: developmental growth	1.32E-03
20	GO:1900865: chloroplast RNA modification	1.47E-03
21	GO:0006535: cysteine biosynthetic process from serine	1.63E-03
22	GO:0009734: auxin-activated signaling pathway	1.89E-03
23	GO:0010582: floral meristem determinacy	1.96E-03
24	GO:0010152: pollen maturation	1.96E-03
25	GO:0010102: lateral root morphogenesis	2.14E-03
26	GO:0010588: cotyledon vascular tissue pattern formation	2.14E-03
27	GO:0009933: meristem structural organization	2.32E-03
28	GO:0010540: basipetal auxin transport	2.32E-03
29	GO:0048467: gynoecium development	2.32E-03
30	GO:0009825: multidimensional cell growth	2.50E-03
31	GO:0006636: unsaturated fatty acid biosynthetic process	2.69E-03
32	GO:0019344: cysteine biosynthetic process	2.88E-03
33	GO:0048443: stamen development	3.93E-03
34	GO:0010584: pollen exine formation	3.93E-03
35	GO:0080022: primary root development	4.37E-03
36	GO:0008033: tRNA processing	4.37E-03
37	GO:0010087: phloem or xylem histogenesis	4.37E-03
38	GO:0007018: microtubule-based movement	4.83E-03
39	GO:0080156: mitochondrial mRNA modification	5.32E-03
40	GO:0006355: regulation of transcription, DNA-templated	7.74E-03
41	GO:0009926: auxin polar transport	1.16E-02
42	GO:0051707: response to other organism	1.16E-02
43	GO:0009965: leaf morphogenesis	1.26E-02
44	GO:0007275: multicellular organism development	1.46E-02
45	GO:0009555: pollen development	1.54E-02
46	GO:0006417: regulation of translation	1.54E-02
47	GO:0048316: seed development	1.65E-02
48	GO:0048367: shoot system development	1.65E-02
49	GO:0016569: covalent chromatin modification	1.77E-02
50	GO:0045893: positive regulation of transcription, DNA-templated	1.77E-02
51	GO:0040008: regulation of growth	2.63E-02
52	GO:0045490: pectin catabolic process	2.72E-02
53	GO:0071555: cell wall organization	3.12E-02
54	GO:0006351: transcription, DNA-templated	3.99E-02
55	GO:0080167: response to karrikin	4.32E-02
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.43E-02
57	GO:0015979: photosynthesis	4.75E-02
58	GO:0045892: negative regulation of transcription, DNA-templated	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity	0.00E+00
2	GO:0016763: transferase activity, transferring pentosyl groups	0.00E+00
3	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	5.03E-05
4	GO:0016274: protein-arginine N-methyltransferase activity	5.03E-05
5	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.23E-04
6	GO:0032454: histone demethylase activity (H3-K9 specific)	1.23E-04
7	GO:0042389: omega-3 fatty acid desaturase activity	1.23E-04
8	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	1.23E-04
9	GO:0003723: RNA binding	1.39E-04
10	GO:0009041: uridylate kinase activity	3.09E-04
11	GO:0010011: auxin binding	4.15E-04
12	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	4.15E-04
13	GO:0004124: cysteine synthase activity	7.68E-04
14	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.17E-03
15	GO:0031490: chromatin DNA binding	1.47E-03
16	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.96E-03
17	GO:0003725: double-stranded RNA binding	2.14E-03
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.32E-03
19	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.36E-03
20	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.54E-03
21	GO:0030570: pectate lyase activity	3.71E-03
22	GO:0050662: coenzyme binding	4.83E-03
23	GO:0005200: structural constituent of cytoskeleton	6.33E-03
24	GO:0005096: GTPase activator activity	8.53E-03
25	GO:0004222: metalloendopeptidase activity	8.82E-03
26	GO:0004519: endonuclease activity	9.39E-03
27	GO:0043621: protein self-association	1.23E-02
28	GO:0003690: double-stranded DNA binding	1.47E-02
29	GO:0003777: microtubule motor activity	1.54E-02
30	GO:0008026: ATP-dependent helicase activity	1.92E-02
31	GO:0016829: lyase activity	2.29E-02
32	GO:0030170: pyridoxal phosphate binding	2.33E-02
33	GO:0008017: microtubule binding	2.81E-02
34	GO:0008168: methyltransferase activity	3.61E-02
35	GO:0016491: oxidoreductase activity	4.09E-02