Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
2GO:0031222: arabinan catabolic process0.00E+00
3GO:0035884: arabinan biosynthetic process0.00E+00
4GO:0045184: establishment of protein localization0.00E+00
5GO:0009606: tropism0.00E+00
6GO:1903224: regulation of endodermal cell differentiation0.00E+00
7GO:0046620: regulation of organ growth5.75E-10
8GO:0009926: auxin polar transport1.10E-06
9GO:0009734: auxin-activated signaling pathway4.37E-06
10GO:0046739: transport of virus in multicellular host3.30E-05
11GO:0009733: response to auxin3.96E-05
12GO:0035987: endodermal cell differentiation3.02E-04
13GO:0043609: regulation of carbon utilization3.02E-04
14GO:0006436: tryptophanyl-tRNA aminoacylation3.02E-04
15GO:0000066: mitochondrial ornithine transport3.02E-04
16GO:0015904: tetracycline transport3.02E-04
17GO:0042659: regulation of cell fate specification3.02E-04
18GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process3.02E-04
19GO:1901537: positive regulation of DNA demethylation3.02E-04
20GO:0090558: plant epidermis development3.02E-04
21GO:0007389: pattern specification process3.75E-04
22GO:0010497: plasmodesmata-mediated intercellular transport3.75E-04
23GO:0000373: Group II intron splicing4.52E-04
24GO:0010252: auxin homeostasis5.05E-04
25GO:0018026: peptidyl-lysine monomethylation6.60E-04
26GO:0071497: cellular response to freezing6.60E-04
27GO:1900033: negative regulation of trichome patterning6.60E-04
28GO:0080009: mRNA methylation6.60E-04
29GO:2000123: positive regulation of stomatal complex development6.60E-04
30GO:0010569: regulation of double-strand break repair via homologous recombination6.60E-04
31GO:2000039: regulation of trichome morphogenesis6.60E-04
32GO:0001578: microtubule bundle formation1.07E-03
33GO:0006760: folic acid-containing compound metabolic process1.07E-03
34GO:0090708: specification of plant organ axis polarity1.07E-03
35GO:0006000: fructose metabolic process1.07E-03
36GO:0009416: response to light stimulus1.31E-03
37GO:0051289: protein homotetramerization1.53E-03
38GO:1902476: chloride transmembrane transport1.53E-03
39GO:0010306: rhamnogalacturonan II biosynthetic process1.53E-03
40GO:0016998: cell wall macromolecule catabolic process1.74E-03
41GO:1901141: regulation of lignin biosynthetic process2.06E-03
42GO:0048629: trichome patterning2.06E-03
43GO:0051322: anaphase2.06E-03
44GO:0030104: water homeostasis2.06E-03
45GO:2000038: regulation of stomatal complex development2.06E-03
46GO:0046656: folic acid biosynthetic process2.06E-03
47GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.07E-03
48GO:0010082: regulation of root meristem growth2.07E-03
49GO:0007275: multicellular organism development2.48E-03
50GO:0016123: xanthophyll biosynthetic process2.63E-03
51GO:0010375: stomatal complex patterning2.63E-03
52GO:0010405: arabinogalactan protein metabolic process3.24E-03
53GO:0010315: auxin efflux3.24E-03
54GO:0018258: protein O-linked glycosylation via hydroxyproline3.24E-03
55GO:0006655: phosphatidylglycerol biosynthetic process3.24E-03
56GO:1902456: regulation of stomatal opening3.24E-03
57GO:0042793: transcription from plastid promoter3.24E-03
58GO:0010583: response to cyclopentenone3.74E-03
59GO:0009942: longitudinal axis specification3.90E-03
60GO:0046654: tetrahydrofolate biosynthetic process3.90E-03
61GO:0030488: tRNA methylation3.90E-03
62GO:2000067: regulation of root morphogenesis3.90E-03
63GO:0009828: plant-type cell wall loosening4.25E-03
64GO:0030307: positive regulation of cell growth4.60E-03
65GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.60E-03
66GO:0006955: immune response4.60E-03
67GO:0007050: cell cycle arrest4.60E-03
68GO:0006821: chloride transport4.60E-03
69GO:0015937: coenzyme A biosynthetic process4.60E-03
70GO:0010027: thylakoid membrane organization5.06E-03
71GO:0071555: cell wall organization5.28E-03
72GO:0055075: potassium ion homeostasis5.35E-03
73GO:0000105: histidine biosynthetic process5.35E-03
74GO:0048766: root hair initiation5.35E-03
75GO:0001522: pseudouridine synthesis5.35E-03
76GO:0010411: xyloglucan metabolic process5.97E-03
77GO:0006002: fructose 6-phosphate metabolic process6.13E-03
78GO:0007186: G-protein coupled receptor signaling pathway6.13E-03
79GO:0040008: regulation of growth7.06E-03
80GO:0009638: phototropism7.80E-03
81GO:1900865: chloroplast RNA modification7.80E-03
82GO:0031425: chloroplast RNA processing7.80E-03
83GO:2000280: regulation of root development7.80E-03
84GO:0006535: cysteine biosynthetic process from serine8.70E-03
85GO:0006839: mitochondrial transport9.56E-03
86GO:0010015: root morphogenesis9.63E-03
87GO:0016024: CDP-diacylglycerol biosynthetic process1.06E-02
88GO:0042546: cell wall biogenesis1.13E-02
89GO:0009767: photosynthetic electron transport chain1.16E-02
90GO:2000012: regulation of auxin polar transport1.16E-02
91GO:0009785: blue light signaling pathway1.16E-02
92GO:0009691: cytokinin biosynthetic process1.16E-02
93GO:0030048: actin filament-based movement1.16E-02
94GO:0009826: unidimensional cell growth1.25E-02
95GO:0010207: photosystem II assembly1.26E-02
96GO:0009664: plant-type cell wall organization1.36E-02
97GO:0090351: seedling development1.37E-02
98GO:0080188: RNA-directed DNA methylation1.37E-02
99GO:0006863: purine nucleobase transport1.48E-02
100GO:0006833: water transport1.48E-02
101GO:0019344: cysteine biosynthetic process1.59E-02
102GO:0080147: root hair cell development1.59E-02
103GO:0010073: meristem maintenance1.71E-02
104GO:0051302: regulation of cell division1.71E-02
105GO:0006418: tRNA aminoacylation for protein translation1.71E-02
106GO:0006874: cellular calcium ion homeostasis1.71E-02
107GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.79E-02
108GO:0031348: negative regulation of defense response1.95E-02
109GO:0019748: secondary metabolic process1.95E-02
110GO:0009686: gibberellin biosynthetic process2.07E-02
111GO:0080022: primary root development2.46E-02
112GO:0008033: tRNA processing2.46E-02
113GO:0010118: stomatal movement2.46E-02
114GO:0000226: microtubule cytoskeleton organization2.46E-02
115GO:0048868: pollen tube development2.59E-02
116GO:0009741: response to brassinosteroid2.59E-02
117GO:0010268: brassinosteroid homeostasis2.59E-02
118GO:0009958: positive gravitropism2.59E-02
119GO:0008654: phospholipid biosynthetic process2.87E-02
120GO:0009851: auxin biosynthetic process2.87E-02
121GO:0016132: brassinosteroid biosynthetic process3.01E-02
122GO:0080156: mitochondrial mRNA modification3.01E-02
123GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.01E-02
124GO:0071554: cell wall organization or biogenesis3.01E-02
125GO:0009630: gravitropism3.16E-02
126GO:0019761: glucosinolate biosynthetic process3.16E-02
127GO:1901657: glycosyl compound metabolic process3.31E-02
128GO:0016125: sterol metabolic process3.46E-02
129GO:0007267: cell-cell signaling3.61E-02
130GO:0009451: RNA modification3.69E-02
131GO:0000910: cytokinesis3.76E-02
132GO:0006357: regulation of transcription from RNA polymerase II promoter3.97E-02
133GO:0006974: cellular response to DNA damage stimulus4.24E-02
134GO:0048481: plant ovule development4.73E-02
135GO:0048767: root hair elongation4.90E-02
136GO:0000160: phosphorelay signal transduction system4.90E-02
137GO:0010311: lateral root formation4.90E-02
138GO:0009832: plant-type cell wall biogenesis4.90E-02
RankGO TermAdjusted P value
1GO:0070009: serine-type aminopeptidase activity0.00E+00
2GO:0071633: dihydroceramidase activity0.00E+00
3GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
4GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
5GO:0001872: (1->3)-beta-D-glucan binding3.30E-05
6GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity3.02E-04
7GO:0004830: tryptophan-tRNA ligase activity3.02E-04
8GO:0004400: histidinol-phosphate transaminase activity3.02E-04
9GO:0004632: phosphopantothenate--cysteine ligase activity3.02E-04
10GO:0042834: peptidoglycan binding3.02E-04
11GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity3.02E-04
12GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity3.02E-04
13GO:0005290: L-histidine transmembrane transporter activity3.02E-04
14GO:0003867: 4-aminobutyrate transaminase activity3.02E-04
15GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity3.02E-04
16GO:0052381: tRNA dimethylallyltransferase activity3.02E-04
17GO:0051777: ent-kaurenoate oxidase activity3.02E-04
18GO:0009672: auxin:proton symporter activity5.34E-04
19GO:0102083: 7,8-dihydromonapterin aldolase activity6.60E-04
20GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity6.60E-04
21GO:0008805: carbon-monoxide oxygenase activity6.60E-04
22GO:0008493: tetracycline transporter activity6.60E-04
23GO:0000064: L-ornithine transmembrane transporter activity6.60E-04
24GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity6.60E-04
25GO:0004150: dihydroneopterin aldolase activity6.60E-04
26GO:0010329: auxin efflux transmembrane transporter activity9.29E-04
27GO:0016805: dipeptidase activity1.07E-03
28GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.18E-03
29GO:0015189: L-lysine transmembrane transporter activity1.53E-03
30GO:0015181: arginine transmembrane transporter activity1.53E-03
31GO:0005253: anion channel activity2.06E-03
32GO:0046556: alpha-L-arabinofuranosidase activity2.06E-03
33GO:0016279: protein-lysine N-methyltransferase activity2.06E-03
34GO:0004930: G-protein coupled receptor activity2.06E-03
35GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.63E-03
36GO:0004523: RNA-DNA hybrid ribonuclease activity2.63E-03
37GO:0005247: voltage-gated chloride channel activity3.24E-03
38GO:2001070: starch binding3.24E-03
39GO:0004605: phosphatidate cytidylyltransferase activity3.24E-03
40GO:1990714: hydroxyproline O-galactosyltransferase activity3.24E-03
41GO:0004650: polygalacturonase activity3.33E-03
42GO:0016762: xyloglucan:xyloglucosyl transferase activity3.50E-03
43GO:0004518: nuclease activity3.74E-03
44GO:0004124: cysteine synthase activity3.90E-03
45GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.90E-03
46GO:0016832: aldehyde-lyase activity3.90E-03
47GO:0016798: hydrolase activity, acting on glycosyl bonds5.97E-03
48GO:0030247: polysaccharide binding5.97E-03
49GO:0015144: carbohydrate transmembrane transporter activity6.25E-03
50GO:0005351: sugar:proton symporter activity7.28E-03
51GO:0004022: alcohol dehydrogenase (NAD) activity1.16E-02
52GO:0009982: pseudouridine synthase activity1.16E-02
53GO:0003725: double-stranded RNA binding1.16E-02
54GO:0003723: RNA binding1.23E-02
55GO:0003774: motor activity1.26E-02
56GO:0004970: ionotropic glutamate receptor activity1.37E-02
57GO:0005217: intracellular ligand-gated ion channel activity1.37E-02
58GO:0005345: purine nucleobase transmembrane transporter activity1.71E-02
59GO:0003964: RNA-directed DNA polymerase activity1.82E-02
60GO:0008408: 3'-5' exonuclease activity1.82E-02
61GO:0004707: MAP kinase activity1.82E-02
62GO:0005215: transporter activity1.95E-02
63GO:0022891: substrate-specific transmembrane transporter activity2.07E-02
64GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.16E-02
65GO:0004812: aminoacyl-tRNA ligase activity2.33E-02
66GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.47E-02
67GO:0004527: exonuclease activity2.59E-02
68GO:0001085: RNA polymerase II transcription factor binding2.59E-02
69GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.59E-02
70GO:0016829: lyase activity2.83E-02
71GO:0019901: protein kinase binding2.87E-02
72GO:0004519: endonuclease activity3.11E-02
73GO:0000156: phosphorelay response regulator activity3.31E-02
74GO:0016759: cellulose synthase activity3.46E-02
75GO:0005200: structural constituent of cytoskeleton3.61E-02
76GO:0008237: metallopeptidase activity3.61E-02
77GO:0016413: O-acetyltransferase activity3.76E-02
78GO:0008017: microtubule binding3.77E-02
79GO:0051213: dioxygenase activity3.92E-02
80GO:0102483: scopolin beta-glucosidase activity4.40E-02
81GO:0005096: GTPase activator activity4.90E-02
82GO:0015238: drug transmembrane transporter activity4.90E-02
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Gene type



Gene DE type