GO Enrichment Analysis of Co-expressed Genes with
AT2G37500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0042407: cristae formation | 0.00E+00 |
| 3 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 4 | GO:0051958: methotrexate transport | 0.00E+00 |
| 5 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 8 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 9 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 10 | GO:0009658: chloroplast organization | 1.22E-08 |
| 11 | GO:0042793: transcription from plastid promoter | 1.66E-08 |
| 12 | GO:0009734: auxin-activated signaling pathway | 1.06E-06 |
| 13 | GO:0046620: regulation of organ growth | 1.09E-05 |
| 14 | GO:0009657: plastid organization | 1.57E-05 |
| 15 | GO:0009733: response to auxin | 7.87E-05 |
| 16 | GO:0010020: chloroplast fission | 8.85E-05 |
| 17 | GO:0006400: tRNA modification | 2.93E-04 |
| 18 | GO:0009926: auxin polar transport | 3.10E-04 |
| 19 | GO:0006438: valyl-tRNA aminoacylation | 3.42E-04 |
| 20 | GO:0043266: regulation of potassium ion transport | 3.42E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 3.42E-04 |
| 22 | GO:2000021: regulation of ion homeostasis | 3.42E-04 |
| 23 | GO:0043609: regulation of carbon utilization | 3.42E-04 |
| 24 | GO:1902458: positive regulation of stomatal opening | 3.42E-04 |
| 25 | GO:0050801: ion homeostasis | 3.42E-04 |
| 26 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.42E-04 |
| 27 | GO:0006419: alanyl-tRNA aminoacylation | 3.42E-04 |
| 28 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 3.42E-04 |
| 29 | GO:0040008: regulation of growth | 3.55E-04 |
| 30 | GO:0006002: fructose 6-phosphate metabolic process | 4.51E-04 |
| 31 | GO:0009828: plant-type cell wall loosening | 6.38E-04 |
| 32 | GO:1900865: chloroplast RNA modification | 6.39E-04 |
| 33 | GO:0060359: response to ammonium ion | 7.45E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 7.45E-04 |
| 35 | GO:0006423: cysteinyl-tRNA aminoacylation | 7.45E-04 |
| 36 | GO:0018026: peptidyl-lysine monomethylation | 7.45E-04 |
| 37 | GO:0042325: regulation of phosphorylation | 7.45E-04 |
| 38 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 7.45E-04 |
| 39 | GO:1904143: positive regulation of carotenoid biosynthetic process | 7.45E-04 |
| 40 | GO:0045036: protein targeting to chloroplast | 7.45E-04 |
| 41 | GO:0001682: tRNA 5'-leader removal | 7.45E-04 |
| 42 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.45E-04 |
| 43 | GO:0006420: arginyl-tRNA aminoacylation | 7.45E-04 |
| 44 | GO:0045037: protein import into chloroplast stroma | 9.79E-04 |
| 45 | GO:2000012: regulation of auxin polar transport | 1.11E-03 |
| 46 | GO:0006000: fructose metabolic process | 1.21E-03 |
| 47 | GO:0006760: folic acid-containing compound metabolic process | 1.21E-03 |
| 48 | GO:0043157: response to cation stress | 1.21E-03 |
| 49 | GO:0005977: glycogen metabolic process | 1.21E-03 |
| 50 | GO:0010447: response to acidic pH | 1.21E-03 |
| 51 | GO:0007275: multicellular organism development | 1.37E-03 |
| 52 | GO:0016556: mRNA modification | 1.74E-03 |
| 53 | GO:0043572: plastid fission | 1.74E-03 |
| 54 | GO:2001141: regulation of RNA biosynthetic process | 1.74E-03 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 2.09E-03 |
| 56 | GO:0006730: one-carbon metabolic process | 2.28E-03 |
| 57 | GO:0046656: folic acid biosynthetic process | 2.33E-03 |
| 58 | GO:0044205: 'de novo' UMP biosynthetic process | 2.33E-03 |
| 59 | GO:0010021: amylopectin biosynthetic process | 2.33E-03 |
| 60 | GO:0009904: chloroplast accumulation movement | 2.98E-03 |
| 61 | GO:0010236: plastoquinone biosynthetic process | 2.98E-03 |
| 62 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.98E-03 |
| 63 | GO:0016123: xanthophyll biosynthetic process | 2.98E-03 |
| 64 | GO:0010158: abaxial cell fate specification | 2.98E-03 |
| 65 | GO:0016554: cytidine to uridine editing | 3.68E-03 |
| 66 | GO:0032973: amino acid export | 3.68E-03 |
| 67 | GO:0009959: negative gravitropism | 3.68E-03 |
| 68 | GO:0042372: phylloquinone biosynthetic process | 4.43E-03 |
| 69 | GO:0042026: protein refolding | 4.43E-03 |
| 70 | GO:0034389: lipid particle organization | 4.43E-03 |
| 71 | GO:0006458: 'de novo' protein folding | 4.43E-03 |
| 72 | GO:1901259: chloroplast rRNA processing | 4.43E-03 |
| 73 | GO:0017148: negative regulation of translation | 4.43E-03 |
| 74 | GO:0009942: longitudinal axis specification | 4.43E-03 |
| 75 | GO:0046654: tetrahydrofolate biosynthetic process | 4.43E-03 |
| 76 | GO:0009903: chloroplast avoidance movement | 4.43E-03 |
| 77 | GO:0030488: tRNA methylation | 4.43E-03 |
| 78 | GO:0080086: stamen filament development | 4.43E-03 |
| 79 | GO:2000067: regulation of root morphogenesis | 4.43E-03 |
| 80 | GO:0019509: L-methionine salvage from methylthioadenosine | 4.43E-03 |
| 81 | GO:0010583: response to cyclopentenone | 4.50E-03 |
| 82 | GO:0009630: gravitropism | 4.50E-03 |
| 83 | GO:0010050: vegetative phase change | 5.23E-03 |
| 84 | GO:0010196: nonphotochemical quenching | 5.23E-03 |
| 85 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 5.23E-03 |
| 86 | GO:0030307: positive regulation of cell growth | 5.23E-03 |
| 87 | GO:0007050: cell cycle arrest | 5.23E-03 |
| 88 | GO:0009772: photosynthetic electron transport in photosystem II | 5.23E-03 |
| 89 | GO:0043090: amino acid import | 5.23E-03 |
| 90 | GO:0001522: pseudouridine synthesis | 6.08E-03 |
| 91 | GO:0006353: DNA-templated transcription, termination | 6.08E-03 |
| 92 | GO:0009850: auxin metabolic process | 6.08E-03 |
| 93 | GO:0070413: trehalose metabolism in response to stress | 6.08E-03 |
| 94 | GO:0009704: de-etiolation | 6.08E-03 |
| 95 | GO:2000070: regulation of response to water deprivation | 6.08E-03 |
| 96 | GO:0048564: photosystem I assembly | 6.08E-03 |
| 97 | GO:0010027: thylakoid membrane organization | 6.10E-03 |
| 98 | GO:0007389: pattern specification process | 6.98E-03 |
| 99 | GO:0009932: cell tip growth | 6.98E-03 |
| 100 | GO:0071482: cellular response to light stimulus | 6.98E-03 |
| 101 | GO:0010411: xyloglucan metabolic process | 7.19E-03 |
| 102 | GO:0009790: embryo development | 7.67E-03 |
| 103 | GO:0006098: pentose-phosphate shunt | 7.91E-03 |
| 104 | GO:0019432: triglyceride biosynthetic process | 7.91E-03 |
| 105 | GO:0080144: amino acid homeostasis | 7.91E-03 |
| 106 | GO:0000373: Group II intron splicing | 7.91E-03 |
| 107 | GO:0042761: very long-chain fatty acid biosynthetic process | 8.89E-03 |
| 108 | GO:0043067: regulation of programmed cell death | 8.89E-03 |
| 109 | GO:0006535: cysteine biosynthetic process from serine | 9.92E-03 |
| 110 | GO:0006949: syncytium formation | 9.92E-03 |
| 111 | GO:0006259: DNA metabolic process | 9.92E-03 |
| 112 | GO:0009637: response to blue light | 1.01E-02 |
| 113 | GO:0006265: DNA topological change | 1.10E-02 |
| 114 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.10E-02 |
| 115 | GO:0006352: DNA-templated transcription, initiation | 1.10E-02 |
| 116 | GO:0010015: root morphogenesis | 1.10E-02 |
| 117 | GO:0010582: floral meristem determinacy | 1.21E-02 |
| 118 | GO:0010114: response to red light | 1.31E-02 |
| 119 | GO:0006094: gluconeogenesis | 1.32E-02 |
| 120 | GO:0042546: cell wall biogenesis | 1.36E-02 |
| 121 | GO:0010207: photosystem II assembly | 1.44E-02 |
| 122 | GO:0010039: response to iron ion | 1.56E-02 |
| 123 | GO:0071732: cellular response to nitric oxide | 1.56E-02 |
| 124 | GO:0090351: seedling development | 1.56E-02 |
| 125 | GO:0009664: plant-type cell wall organization | 1.64E-02 |
| 126 | GO:0010025: wax biosynthetic process | 1.69E-02 |
| 127 | GO:0006071: glycerol metabolic process | 1.69E-02 |
| 128 | GO:0005992: trehalose biosynthetic process | 1.82E-02 |
| 129 | GO:0019344: cysteine biosynthetic process | 1.82E-02 |
| 130 | GO:0009116: nucleoside metabolic process | 1.82E-02 |
| 131 | GO:0016575: histone deacetylation | 1.95E-02 |
| 132 | GO:0006418: tRNA aminoacylation for protein translation | 1.95E-02 |
| 133 | GO:0019953: sexual reproduction | 1.95E-02 |
| 134 | GO:0016998: cell wall macromolecule catabolic process | 2.08E-02 |
| 135 | GO:0015992: proton transport | 2.08E-02 |
| 136 | GO:0061077: chaperone-mediated protein folding | 2.08E-02 |
| 137 | GO:0006096: glycolytic process | 2.09E-02 |
| 138 | GO:0016226: iron-sulfur cluster assembly | 2.22E-02 |
| 139 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.22E-02 |
| 140 | GO:0007005: mitochondrion organization | 2.22E-02 |
| 141 | GO:0031348: negative regulation of defense response | 2.22E-02 |
| 142 | GO:0009416: response to light stimulus | 2.27E-02 |
| 143 | GO:0071369: cellular response to ethylene stimulus | 2.37E-02 |
| 144 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.37E-02 |
| 145 | GO:0010091: trichome branching | 2.51E-02 |
| 146 | GO:0009306: protein secretion | 2.51E-02 |
| 147 | GO:0016117: carotenoid biosynthetic process | 2.66E-02 |
| 148 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.66E-02 |
| 149 | GO:0009742: brassinosteroid mediated signaling pathway | 2.67E-02 |
| 150 | GO:0006508: proteolysis | 2.69E-02 |
| 151 | GO:0008033: tRNA processing | 2.81E-02 |
| 152 | GO:0006606: protein import into nucleus | 2.81E-02 |
| 153 | GO:0006662: glycerol ether metabolic process | 2.96E-02 |
| 154 | GO:0010197: polar nucleus fusion | 2.96E-02 |
| 155 | GO:0009741: response to brassinosteroid | 2.96E-02 |
| 156 | GO:0048544: recognition of pollen | 3.12E-02 |
| 157 | GO:0007059: chromosome segregation | 3.12E-02 |
| 158 | GO:0009646: response to absence of light | 3.12E-02 |
| 159 | GO:0019252: starch biosynthetic process | 3.28E-02 |
| 160 | GO:0055072: iron ion homeostasis | 3.28E-02 |
| 161 | GO:0002229: defense response to oomycetes | 3.44E-02 |
| 162 | GO:0080156: mitochondrial mRNA modification | 3.44E-02 |
| 163 | GO:0032502: developmental process | 3.61E-02 |
| 164 | GO:0071281: cellular response to iron ion | 3.78E-02 |
| 165 | GO:1901657: glycosyl compound metabolic process | 3.78E-02 |
| 166 | GO:0010252: auxin homeostasis | 3.95E-02 |
| 167 | GO:0071805: potassium ion transmembrane transport | 4.12E-02 |
| 168 | GO:0000910: cytokinesis | 4.30E-02 |
| 169 | GO:0009451: RNA modification | 4.44E-02 |
| 170 | GO:0009911: positive regulation of flower development | 4.47E-02 |
| 171 | GO:0001666: response to hypoxia | 4.47E-02 |
| 172 | GO:0005975: carbohydrate metabolic process | 4.51E-02 |
| 173 | GO:0006974: cellular response to DNA damage stimulus | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 2 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 3 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 4 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 5 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 6 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 7 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 8 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 9 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 10 | GO:0015350: methotrexate transporter activity | 0.00E+00 |
| 11 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 12 | GO:0015231: 5-formyltetrahydrofolate transporter activity | 0.00E+00 |
| 13 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.29E-06 |
| 14 | GO:0004176: ATP-dependent peptidase activity | 1.92E-04 |
| 15 | GO:0003723: RNA binding | 3.12E-04 |
| 16 | GO:0004813: alanine-tRNA ligase activity | 3.42E-04 |
| 17 | GO:0003867: 4-aminobutyrate transaminase activity | 3.42E-04 |
| 18 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.42E-04 |
| 19 | GO:0004832: valine-tRNA ligase activity | 3.42E-04 |
| 20 | GO:0005227: calcium activated cation channel activity | 3.42E-04 |
| 21 | GO:0043621: protein self-association | 3.52E-04 |
| 22 | GO:0008237: metallopeptidase activity | 6.88E-04 |
| 23 | GO:0019156: isoamylase activity | 7.45E-04 |
| 24 | GO:0004150: dihydroneopterin aldolase activity | 7.45E-04 |
| 25 | GO:0008517: folic acid transporter activity | 7.45E-04 |
| 26 | GO:0010291: carotene beta-ring hydroxylase activity | 7.45E-04 |
| 27 | GO:0004814: arginine-tRNA ligase activity | 7.45E-04 |
| 28 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.45E-04 |
| 29 | GO:0004047: aminomethyltransferase activity | 7.45E-04 |
| 30 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 7.45E-04 |
| 31 | GO:0004817: cysteine-tRNA ligase activity | 7.45E-04 |
| 32 | GO:0004557: alpha-galactosidase activity | 1.21E-03 |
| 33 | GO:0052692: raffinose alpha-galactosidase activity | 1.21E-03 |
| 34 | GO:0046524: sucrose-phosphate synthase activity | 1.21E-03 |
| 35 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 1.74E-03 |
| 36 | GO:0048487: beta-tubulin binding | 1.74E-03 |
| 37 | GO:0016851: magnesium chelatase activity | 1.74E-03 |
| 38 | GO:0043023: ribosomal large subunit binding | 1.74E-03 |
| 39 | GO:0019201: nucleotide kinase activity | 1.74E-03 |
| 40 | GO:0004659: prenyltransferase activity | 2.33E-03 |
| 41 | GO:0016279: protein-lysine N-methyltransferase activity | 2.33E-03 |
| 42 | GO:0001053: plastid sigma factor activity | 2.33E-03 |
| 43 | GO:0016987: sigma factor activity | 2.33E-03 |
| 44 | GO:0004519: endonuclease activity | 2.84E-03 |
| 45 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.98E-03 |
| 46 | GO:0004556: alpha-amylase activity | 3.68E-03 |
| 47 | GO:2001070: starch binding | 3.68E-03 |
| 48 | GO:0004332: fructose-bisphosphate aldolase activity | 3.68E-03 |
| 49 | GO:0004526: ribonuclease P activity | 3.68E-03 |
| 50 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.22E-03 |
| 51 | GO:0004017: adenylate kinase activity | 4.43E-03 |
| 52 | GO:0004144: diacylglycerol O-acyltransferase activity | 4.43E-03 |
| 53 | GO:0004124: cysteine synthase activity | 4.43E-03 |
| 54 | GO:0008195: phosphatidate phosphatase activity | 4.43E-03 |
| 55 | GO:0003872: 6-phosphofructokinase activity | 5.23E-03 |
| 56 | GO:0004427: inorganic diphosphatase activity | 5.23E-03 |
| 57 | GO:0043022: ribosome binding | 6.08E-03 |
| 58 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 6.98E-03 |
| 59 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 6.98E-03 |
| 60 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.19E-03 |
| 61 | GO:0004222: metalloendopeptidase activity | 8.79E-03 |
| 62 | GO:0009672: auxin:proton symporter activity | 8.89E-03 |
| 63 | GO:0004805: trehalose-phosphatase activity | 9.92E-03 |
| 64 | GO:0003993: acid phosphatase activity | 1.06E-02 |
| 65 | GO:0044183: protein binding involved in protein folding | 1.10E-02 |
| 66 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.21E-02 |
| 67 | GO:0000049: tRNA binding | 1.21E-02 |
| 68 | GO:0004565: beta-galactosidase activity | 1.32E-02 |
| 69 | GO:0010329: auxin efflux transmembrane transporter activity | 1.32E-02 |
| 70 | GO:0019888: protein phosphatase regulator activity | 1.32E-02 |
| 71 | GO:0009982: pseudouridine synthase activity | 1.32E-02 |
| 72 | GO:0005525: GTP binding | 1.59E-02 |
| 73 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.69E-02 |
| 74 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.69E-02 |
| 75 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.69E-02 |
| 76 | GO:0003714: transcription corepressor activity | 1.82E-02 |
| 77 | GO:0051536: iron-sulfur cluster binding | 1.82E-02 |
| 78 | GO:0004407: histone deacetylase activity | 1.82E-02 |
| 79 | GO:0015079: potassium ion transmembrane transporter activity | 1.95E-02 |
| 80 | GO:0003964: RNA-directed DNA polymerase activity | 2.08E-02 |
| 81 | GO:0008408: 3'-5' exonuclease activity | 2.08E-02 |
| 82 | GO:0047134: protein-disulfide reductase activity | 2.66E-02 |
| 83 | GO:0004812: aminoacyl-tRNA ligase activity | 2.66E-02 |
| 84 | GO:0004527: exonuclease activity | 2.96E-02 |
| 85 | GO:0008536: Ran GTPase binding | 2.96E-02 |
| 86 | GO:0016740: transferase activity | 3.04E-02 |
| 87 | GO:0004791: thioredoxin-disulfide reductase activity | 3.12E-02 |
| 88 | GO:0016853: isomerase activity | 3.12E-02 |
| 89 | GO:0019843: rRNA binding | 3.15E-02 |
| 90 | GO:0008565: protein transporter activity | 3.77E-02 |
| 91 | GO:0000156: phosphorelay response regulator activity | 3.78E-02 |
| 92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.78E-02 |
| 93 | GO:0009055: electron carrier activity | 3.85E-02 |
| 94 | GO:0016791: phosphatase activity | 3.95E-02 |
| 95 | GO:0016597: amino acid binding | 4.30E-02 |