Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046719: regulation by virus of viral protein levels in host cell0.00E+00
2GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
3GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
4GO:0009606: tropism0.00E+00
5GO:0019447: D-cysteine catabolic process0.00E+00
6GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
7GO:1903224: regulation of endodermal cell differentiation0.00E+00
8GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
9GO:0007638: mechanosensory behavior0.00E+00
10GO:0035884: arabinan biosynthetic process0.00E+00
11GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
12GO:0010480: microsporocyte differentiation0.00E+00
13GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
14GO:0097164: ammonium ion metabolic process0.00E+00
15GO:0070455: positive regulation of heme biosynthetic process0.00E+00
16GO:0045184: establishment of protein localization0.00E+00
17GO:0006399: tRNA metabolic process0.00E+00
18GO:0015843: methylammonium transport0.00E+00
19GO:0031222: arabinan catabolic process0.00E+00
20GO:1901333: positive regulation of lateral root development0.00E+00
21GO:0009734: auxin-activated signaling pathway3.26E-06
22GO:0042793: transcription from plastid promoter8.74E-06
23GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway8.98E-06
24GO:0046620: regulation of organ growth3.41E-05
25GO:0009451: RNA modification5.28E-05
26GO:0009926: auxin polar transport1.43E-04
27GO:2000038: regulation of stomatal complex development1.59E-04
28GO:0009658: chloroplast organization1.63E-04
29GO:0009767: photosynthetic electron transport chain2.00E-04
30GO:0009904: chloroplast accumulation movement2.42E-04
31GO:0009903: chloroplast avoidance movement4.54E-04
32GO:2000037: regulation of stomatal complex patterning4.54E-04
33GO:2000067: regulation of root morphogenesis4.54E-04
34GO:0000160: phosphorelay signal transduction system4.60E-04
35GO:0042659: regulation of cell fate specification5.43E-04
36GO:0090558: plant epidermis development5.43E-04
37GO:0035987: endodermal cell differentiation5.43E-04
38GO:0043609: regulation of carbon utilization5.43E-04
39GO:0006436: tryptophanyl-tRNA aminoacylation5.43E-04
40GO:0050801: ion homeostasis5.43E-04
41GO:0050891: multicellular organismal water homeostasis5.43E-04
42GO:0034757: negative regulation of iron ion transport5.43E-04
43GO:0010376: stomatal complex formation5.43E-04
44GO:0048437: floral organ development5.81E-04
45GO:0006002: fructose 6-phosphate metabolic process8.82E-04
46GO:0006468: protein phosphorylation9.13E-04
47GO:0006783: heme biosynthetic process1.05E-03
48GO:0000373: Group II intron splicing1.05E-03
49GO:0009629: response to gravity1.17E-03
50GO:0080005: photosystem stoichiometry adjustment1.17E-03
51GO:0010254: nectary development1.17E-03
52GO:0070981: L-asparagine biosynthetic process1.17E-03
53GO:0010271: regulation of chlorophyll catabolic process1.17E-03
54GO:1902326: positive regulation of chlorophyll biosynthetic process1.17E-03
55GO:0010569: regulation of double-strand break repair via homologous recombination1.17E-03
56GO:0018026: peptidyl-lysine monomethylation1.17E-03
57GO:0010434: bract formation1.17E-03
58GO:0071497: cellular response to freezing1.17E-03
59GO:0042325: regulation of phosphorylation1.17E-03
60GO:0010235: guard mother cell cytokinesis1.17E-03
61GO:1904143: positive regulation of carotenoid biosynthetic process1.17E-03
62GO:0048439: flower morphogenesis1.17E-03
63GO:0031648: protein destabilization1.17E-03
64GO:0071258: cellular response to gravity1.17E-03
65GO:0006529: asparagine biosynthetic process1.17E-03
66GO:2000123: positive regulation of stomatal complex development1.17E-03
67GO:0061087: positive regulation of histone H3-K27 methylation1.17E-03
68GO:0042761: very long-chain fatty acid biosynthetic process1.24E-03
69GO:0032502: developmental process1.29E-03
70GO:0009736: cytokinin-activated signaling pathway1.43E-03
71GO:0048229: gametophyte development1.67E-03
72GO:0080117: secondary growth1.92E-03
73GO:0031022: nuclear migration along microfilament1.92E-03
74GO:0051127: positive regulation of actin nucleation1.92E-03
75GO:0090708: specification of plant organ axis polarity1.92E-03
76GO:1902806: regulation of cell cycle G1/S phase transition1.92E-03
77GO:0006000: fructose metabolic process1.92E-03
78GO:0090436: leaf pavement cell development1.92E-03
79GO:0051604: protein maturation1.92E-03
80GO:0001578: microtubule bundle formation1.92E-03
81GO:0010582: floral meristem determinacy1.92E-03
82GO:0016050: vesicle organization1.92E-03
83GO:0009954: proximal/distal pattern formation1.92E-03
84GO:0010447: response to acidic pH1.92E-03
85GO:0009733: response to auxin1.99E-03
86GO:0010075: regulation of meristem growth2.18E-03
87GO:0009934: regulation of meristem structural organization2.46E-03
88GO:0044211: CTP salvage2.78E-03
89GO:0015696: ammonium transport2.78E-03
90GO:0046739: transport of virus in multicellular host2.78E-03
91GO:2000904: regulation of starch metabolic process2.78E-03
92GO:0043572: plastid fission2.78E-03
93GO:2001141: regulation of RNA biosynthetic process2.78E-03
94GO:1902476: chloride transmembrane transport2.78E-03
95GO:0007231: osmosensory signaling pathway2.78E-03
96GO:0051639: actin filament network formation2.78E-03
97GO:0009800: cinnamic acid biosynthetic process2.78E-03
98GO:0010239: chloroplast mRNA processing2.78E-03
99GO:0033014: tetrapyrrole biosynthetic process2.78E-03
100GO:0009944: polarity specification of adaxial/abaxial axis3.42E-03
101GO:0033500: carbohydrate homeostasis3.75E-03
102GO:1902584: positive regulation of response to water deprivation3.75E-03
103GO:0072488: ammonium transmembrane transport3.75E-03
104GO:0044205: 'de novo' UMP biosynthetic process3.75E-03
105GO:0044206: UMP salvage3.75E-03
106GO:0006346: methylation-dependent chromatin silencing3.75E-03
107GO:0009165: nucleotide biosynthetic process3.75E-03
108GO:1901141: regulation of lignin biosynthetic process3.75E-03
109GO:0051764: actin crosslink formation3.75E-03
110GO:1901002: positive regulation of response to salt stress3.75E-03
111GO:0051322: anaphase3.75E-03
112GO:0030104: water homeostasis3.75E-03
113GO:0006306: DNA methylation4.16E-03
114GO:0016998: cell wall macromolecule catabolic process4.16E-03
115GO:0048578: positive regulation of long-day photoperiodism, flowering4.81E-03
116GO:0032876: negative regulation of DNA endoreduplication4.81E-03
117GO:0030308: negative regulation of cell growth4.81E-03
118GO:0010375: stomatal complex patterning4.81E-03
119GO:0006544: glycine metabolic process4.81E-03
120GO:1902183: regulation of shoot apical meristem development4.81E-03
121GO:0016123: xanthophyll biosynthetic process4.81E-03
122GO:0010438: cellular response to sulfur starvation4.81E-03
123GO:0010158: abaxial cell fate specification4.81E-03
124GO:0010082: regulation of root meristem growth4.97E-03
125GO:0006139: nucleobase-containing compound metabolic process5.96E-03
126GO:0048831: regulation of shoot system development5.96E-03
127GO:0010315: auxin efflux5.96E-03
128GO:0006559: L-phenylalanine catabolic process5.96E-03
129GO:0006206: pyrimidine nucleobase metabolic process5.96E-03
130GO:0018258: protein O-linked glycosylation via hydroxyproline5.96E-03
131GO:0009228: thiamine biosynthetic process5.96E-03
132GO:0006563: L-serine metabolic process5.96E-03
133GO:0010405: arabinogalactan protein metabolic process5.96E-03
134GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.96E-03
135GO:0009959: negative gravitropism5.96E-03
136GO:0006655: phosphatidylglycerol biosynthetic process5.96E-03
137GO:0048653: anther development6.35E-03
138GO:0048509: regulation of meristem development7.20E-03
139GO:0030488: tRNA methylation7.20E-03
140GO:0009554: megasporogenesis7.20E-03
141GO:1901259: chloroplast rRNA processing7.20E-03
142GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.20E-03
143GO:0009955: adaxial/abaxial pattern specification7.20E-03
144GO:0009646: response to absence of light7.37E-03
145GO:0009416: response to light stimulus7.56E-03
146GO:0006821: chloride transport8.52E-03
147GO:0010050: vegetative phase change8.52E-03
148GO:0010444: guard mother cell differentiation8.52E-03
149GO:0006400: tRNA modification8.52E-03
150GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.52E-03
151GO:0010161: red light signaling pathway8.52E-03
152GO:0009610: response to symbiotic fungus8.52E-03
153GO:0006955: immune response8.52E-03
154GO:0007050: cell cycle arrest8.52E-03
155GO:0031047: gene silencing by RNA9.06E-03
156GO:0010439: regulation of glucosinolate biosynthetic process9.92E-03
157GO:0001522: pseudouridine synthesis9.92E-03
158GO:0009850: auxin metabolic process9.92E-03
159GO:0009787: regulation of abscisic acid-activated signaling pathway9.92E-03
160GO:0009704: de-etiolation9.92E-03
161GO:0032875: regulation of DNA endoreduplication9.92E-03
162GO:0030162: regulation of proteolysis9.92E-03
163GO:0042255: ribosome assembly9.92E-03
164GO:0048766: root hair initiation9.92E-03
165GO:0055075: potassium ion homeostasis9.92E-03
166GO:0006402: mRNA catabolic process9.92E-03
167GO:0071555: cell wall organization1.12E-02
168GO:0010052: guard cell differentiation1.14E-02
169GO:0009827: plant-type cell wall modification1.14E-02
170GO:0010100: negative regulation of photomorphogenesis1.14E-02
171GO:0006526: arginine biosynthetic process1.14E-02
172GO:0010497: plasmodesmata-mediated intercellular transport1.14E-02
173GO:0032544: plastid translation1.14E-02
174GO:0007389: pattern specification process1.14E-02
175GO:0010099: regulation of photomorphogenesis1.14E-02
176GO:0071482: cellular response to light stimulus1.14E-02
177GO:0009742: brassinosteroid mediated signaling pathway1.24E-02
178GO:0009051: pentose-phosphate shunt, oxidative branch1.30E-02
179GO:2000024: regulation of leaf development1.30E-02
180GO:0010029: regulation of seed germination1.30E-02
181GO:0051865: protein autoubiquitination1.30E-02
182GO:0006974: cellular response to DNA damage stimulus1.38E-02
183GO:0010411: xyloglucan metabolic process1.45E-02
184GO:0015995: chlorophyll biosynthetic process1.45E-02
185GO:0035999: tetrahydrofolate interconversion1.46E-02
186GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.46E-02
187GO:0008202: steroid metabolic process1.46E-02
188GO:0031425: chloroplast RNA processing1.46E-02
189GO:2000280: regulation of root development1.46E-02
190GO:0009638: phototropism1.46E-02
191GO:0009299: mRNA transcription1.63E-02
192GO:0006535: cysteine biosynthetic process from serine1.63E-02
193GO:0009089: lysine biosynthetic process via diaminopimelate1.81E-02
194GO:0006816: calcium ion transport1.81E-02
195GO:0009682: induced systemic resistance1.81E-02
196GO:0006352: DNA-templated transcription, initiation1.81E-02
197GO:0016024: CDP-diacylglycerol biosynthetic process1.99E-02
198GO:0045037: protein import into chloroplast stroma1.99E-02
199GO:0008361: regulation of cell size1.99E-02
200GO:0009637: response to blue light2.05E-02
201GO:0006006: glucose metabolic process2.18E-02
202GO:0009785: blue light signaling pathway2.18E-02
203GO:0030036: actin cytoskeleton organization2.18E-02
204GO:0009725: response to hormone2.18E-02
205GO:0006541: glutamine metabolic process2.37E-02
206GO:0010020: chloroplast fission2.37E-02
207GO:0006897: endocytosis2.44E-02
208GO:0010039: response to iron ion2.58E-02
209GO:0090351: seedling development2.58E-02
210GO:0070588: calcium ion transmembrane transport2.58E-02
211GO:0007166: cell surface receptor signaling pathway2.73E-02
212GO:0042546: cell wall biogenesis2.75E-02
213GO:0010025: wax biosynthetic process2.78E-02
214GO:0006071: glycerol metabolic process2.78E-02
215GO:0006833: water transport2.78E-02
216GO:0008380: RNA splicing2.88E-02
217GO:0009617: response to bacterium2.88E-02
218GO:0000027: ribosomal large subunit assembly3.00E-02
219GO:0051017: actin filament bundle assembly3.00E-02
220GO:0010187: negative regulation of seed germination3.00E-02
221GO:0005992: trehalose biosynthetic process3.00E-02
222GO:0019344: cysteine biosynthetic process3.00E-02
223GO:0008299: isoprenoid biosynthetic process3.22E-02
224GO:0006418: tRNA aminoacylation for protein translation3.22E-02
225GO:0006825: copper ion transport3.22E-02
226GO:0051302: regulation of cell division3.22E-02
227GO:2000022: regulation of jasmonic acid mediated signaling pathway3.67E-02
228GO:0006730: one-carbon metabolic process3.67E-02
229GO:0080092: regulation of pollen tube growth3.67E-02
230GO:0009693: ethylene biosynthetic process3.90E-02
231GO:0071215: cellular response to abscisic acid stimulus3.90E-02
232GO:0009686: gibberellin biosynthetic process3.90E-02
233GO:0009625: response to insect3.90E-02
234GO:0010227: floral organ abscission3.90E-02
235GO:0010091: trichome branching4.14E-02
236GO:0006284: base-excision repair4.14E-02
237GO:0070417: cellular response to cold4.39E-02
238GO:0007275: multicellular organism development4.50E-02
239GO:0042631: cellular response to water deprivation4.63E-02
240GO:0000226: microtubule cytoskeleton organization4.63E-02
241GO:0080022: primary root development4.63E-02
242GO:0010087: phloem or xylem histogenesis4.63E-02
243GO:0009740: gibberellic acid mediated signaling pathway4.75E-02
244GO:0006342: chromatin silencing4.89E-02
245GO:0009741: response to brassinosteroid4.89E-02
246GO:0009958: positive gravitropism4.89E-02
RankGO TermAdjusted P value
1GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity0.00E+00
2GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
3GO:0019148: D-cysteine desulfhydrase activity0.00E+00
4GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
5GO:0004056: argininosuccinate lyase activity0.00E+00
6GO:0019136: deoxynucleoside kinase activity0.00E+00
7GO:0005089: Rho guanyl-nucleotide exchange factor activity1.35E-04
8GO:0009982: pseudouridine synthase activity2.00E-04
9GO:0016773: phosphotransferase activity, alcohol group as acceptor2.42E-04
10GO:0008836: diaminopimelate decarboxylase activity5.43E-04
11GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity5.43E-04
12GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity5.43E-04
13GO:0042834: peptidoglycan binding5.43E-04
14GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.43E-04
15GO:0004008: copper-exporting ATPase activity5.43E-04
16GO:0004071: aspartate-ammonia ligase activity5.43E-04
17GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.43E-04
18GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.43E-04
19GO:0004830: tryptophan-tRNA ligase activity5.43E-04
20GO:0010313: phytochrome binding5.43E-04
21GO:0050139: nicotinate-N-glucosyltransferase activity5.43E-04
22GO:0004672: protein kinase activity5.59E-04
23GO:0004674: protein serine/threonine kinase activity8.11E-04
24GO:0003723: RNA binding9.47E-04
25GO:0043621: protein self-association1.02E-03
26GO:0009884: cytokinin receptor activity1.17E-03
27GO:0050017: L-3-cyanoalanine synthase activity1.17E-03
28GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.17E-03
29GO:0043425: bHLH transcription factor binding1.17E-03
30GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.17E-03
31GO:0000156: phosphorelay response regulator activity1.40E-03
32GO:0046524: sucrose-phosphate synthase activity1.92E-03
33GO:0070330: aromatase activity1.92E-03
34GO:0017150: tRNA dihydrouridine synthase activity1.92E-03
35GO:0045548: phenylalanine ammonia-lyase activity1.92E-03
36GO:0005034: osmosensor activity1.92E-03
37GO:0005515: protein binding2.38E-03
38GO:0008508: bile acid:sodium symporter activity2.78E-03
39GO:0001872: (1->3)-beta-D-glucan binding2.78E-03
40GO:0004519: endonuclease activity2.88E-03
41GO:0016987: sigma factor activity3.75E-03
42GO:0005253: anion channel activity3.75E-03
43GO:0043495: protein anchor3.75E-03
44GO:0046556: alpha-L-arabinofuranosidase activity3.75E-03
45GO:0016279: protein-lysine N-methyltransferase activity3.75E-03
46GO:0001053: plastid sigma factor activity3.75E-03
47GO:0004845: uracil phosphoribosyltransferase activity3.75E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity3.75E-03
49GO:0033612: receptor serine/threonine kinase binding4.16E-03
50GO:0018685: alkane 1-monooxygenase activity4.81E-03
51GO:0008725: DNA-3-methyladenine glycosylase activity4.81E-03
52GO:0004372: glycine hydroxymethyltransferase activity4.81E-03
53GO:0003727: single-stranded RNA binding5.41E-03
54GO:0008519: ammonium transmembrane transporter activity5.96E-03
55GO:0005247: voltage-gated chloride channel activity5.96E-03
56GO:2001070: starch binding5.96E-03
57GO:0004605: phosphatidate cytidylyltransferase activity5.96E-03
58GO:1990714: hydroxyproline O-galactosyltransferase activity5.96E-03
59GO:0004849: uridine kinase activity7.20E-03
60GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity7.20E-03
61GO:0019900: kinase binding7.20E-03
62GO:0004124: cysteine synthase activity7.20E-03
63GO:0008195: phosphatidate phosphatase activity7.20E-03
64GO:0010181: FMN binding7.37E-03
65GO:0016491: oxidoreductase activity7.91E-03
66GO:0019901: protein kinase binding7.91E-03
67GO:0003777: microtubule motor activity8.36E-03
68GO:0016762: xyloglucan:xyloglucosyl transferase activity8.47E-03
69GO:0003872: 6-phosphofructokinase activity8.52E-03
70GO:0008173: RNA methyltransferase activity1.14E-02
71GO:0005375: copper ion transmembrane transporter activity1.14E-02
72GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity1.14E-02
73GO:0008142: oxysterol binding1.14E-02
74GO:0005524: ATP binding1.21E-02
75GO:0008889: glycerophosphodiester phosphodiesterase activity1.30E-02
76GO:0016798: hydrolase activity, acting on glycosyl bonds1.45E-02
77GO:0009672: auxin:proton symporter activity1.46E-02
78GO:0019843: rRNA binding1.54E-02
79GO:0004673: protein histidine kinase activity1.63E-02
80GO:0004713: protein tyrosine kinase activity1.63E-02
81GO:0004805: trehalose-phosphatase activity1.63E-02
82GO:0008559: xenobiotic-transporting ATPase activity1.81E-02
83GO:0000976: transcription regulatory region sequence-specific DNA binding1.99E-02
84GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.11E-02
85GO:0004022: alcohol dehydrogenase (NAD) activity2.18E-02
86GO:0010329: auxin efflux transmembrane transporter activity2.18E-02
87GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.18E-02
88GO:0004089: carbonate dehydratase activity2.18E-02
89GO:0031072: heat shock protein binding2.18E-02
90GO:0000155: phosphorelay sensor kinase activity2.18E-02
91GO:0005262: calcium channel activity2.18E-02
92GO:0019888: protein phosphatase regulator activity2.18E-02
93GO:0051539: 4 iron, 4 sulfur cluster binding2.34E-02
94GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.37E-02
95GO:0008017: microtubule binding2.45E-02
96GO:0042802: identical protein binding3.12E-02
97GO:0043424: protein histidine kinase binding3.22E-02
98GO:0005345: purine nucleobase transmembrane transporter activity3.22E-02
99GO:0003964: RNA-directed DNA polymerase activity3.44E-02
100GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.57E-02
101GO:0008514: organic anion transmembrane transporter activity4.14E-02
102GO:0003682: chromatin binding4.26E-02
103GO:0004812: aminoacyl-tRNA ligase activity4.39E-02
104GO:0050660: flavin adenine dinucleotide binding4.75E-02
105GO:0001085: RNA polymerase II transcription factor binding4.89E-02
106GO:0003713: transcription coactivator activity4.89E-02
107GO:0005199: structural constituent of cell wall4.89E-02
108GO:0008536: Ran GTPase binding4.89E-02
<
Gene type



Gene DE type