GO Enrichment Analysis of Co-expressed Genes with
AT2G36000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 2 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 3 | GO:0009606: tropism | 0.00E+00 |
| 4 | GO:0015843: methylammonium transport | 0.00E+00 |
| 5 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 6 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 7 | GO:0050776: regulation of immune response | 0.00E+00 |
| 8 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 9 | GO:0046620: regulation of organ growth | 1.06E-07 |
| 10 | GO:0009926: auxin polar transport | 2.53E-05 |
| 11 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.72E-05 |
| 12 | GO:0009734: auxin-activated signaling pathway | 4.57E-05 |
| 13 | GO:0009733: response to auxin | 5.65E-05 |
| 14 | GO:2000038: regulation of stomatal complex development | 6.61E-05 |
| 15 | GO:0032876: negative regulation of DNA endoreduplication | 1.04E-04 |
| 16 | GO:0010480: microsporocyte differentiation | 3.22E-04 |
| 17 | GO:0034971: histone H3-R17 methylation | 3.22E-04 |
| 18 | GO:0034970: histone H3-R2 methylation | 3.22E-04 |
| 19 | GO:0034972: histone H3-R26 methylation | 3.22E-04 |
| 20 | GO:0007389: pattern specification process | 4.12E-04 |
| 21 | GO:0000373: Group II intron splicing | 4.95E-04 |
| 22 | GO:0010252: auxin homeostasis | 5.68E-04 |
| 23 | GO:0010434: bract formation | 7.02E-04 |
| 24 | GO:0048439: flower morphogenesis | 7.02E-04 |
| 25 | GO:1902884: positive regulation of response to oxidative stress | 7.02E-04 |
| 26 | GO:0070981: L-asparagine biosynthetic process | 7.02E-04 |
| 27 | GO:0071497: cellular response to freezing | 7.02E-04 |
| 28 | GO:0009662: etioplast organization | 7.02E-04 |
| 29 | GO:0006529: asparagine biosynthetic process | 7.02E-04 |
| 30 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 7.02E-04 |
| 31 | GO:2000123: positive regulation of stomatal complex development | 7.02E-04 |
| 32 | GO:0010254: nectary development | 7.02E-04 |
| 33 | GO:0010582: floral meristem determinacy | 8.99E-04 |
| 34 | GO:0009767: photosynthetic electron transport chain | 1.02E-03 |
| 35 | GO:0071705: nitrogen compound transport | 1.14E-03 |
| 36 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.14E-03 |
| 37 | GO:0009954: proximal/distal pattern formation | 1.14E-03 |
| 38 | GO:0051127: positive regulation of actin nucleation | 1.14E-03 |
| 39 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.57E-03 |
| 40 | GO:0009800: cinnamic acid biosynthetic process | 1.63E-03 |
| 41 | GO:0015696: ammonium transport | 1.63E-03 |
| 42 | GO:0046739: transport of virus in multicellular host | 1.63E-03 |
| 43 | GO:2000904: regulation of starch metabolic process | 1.63E-03 |
| 44 | GO:0043572: plastid fission | 1.63E-03 |
| 45 | GO:1902476: chloride transmembrane transport | 1.63E-03 |
| 46 | GO:0051513: regulation of monopolar cell growth | 1.63E-03 |
| 47 | GO:0007231: osmosensory signaling pathway | 1.63E-03 |
| 48 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 1.63E-03 |
| 49 | GO:0051639: actin filament network formation | 1.63E-03 |
| 50 | GO:0044211: CTP salvage | 1.63E-03 |
| 51 | GO:0007623: circadian rhythm | 1.70E-03 |
| 52 | GO:0044206: UMP salvage | 2.19E-03 |
| 53 | GO:0033500: carbohydrate homeostasis | 2.19E-03 |
| 54 | GO:1901141: regulation of lignin biosynthetic process | 2.19E-03 |
| 55 | GO:0051764: actin crosslink formation | 2.19E-03 |
| 56 | GO:0071249: cellular response to nitrate | 2.19E-03 |
| 57 | GO:0072488: ammonium transmembrane transport | 2.19E-03 |
| 58 | GO:0010082: regulation of root meristem growth | 2.28E-03 |
| 59 | GO:0006544: glycine metabolic process | 2.80E-03 |
| 60 | GO:0009904: chloroplast accumulation movement | 2.80E-03 |
| 61 | GO:1902183: regulation of shoot apical meristem development | 2.80E-03 |
| 62 | GO:0016123: xanthophyll biosynthetic process | 2.80E-03 |
| 63 | GO:0010438: cellular response to sulfur starvation | 2.80E-03 |
| 64 | GO:0010158: abaxial cell fate specification | 2.80E-03 |
| 65 | GO:0030308: negative regulation of cell growth | 2.80E-03 |
| 66 | GO:0010375: stomatal complex patterning | 2.80E-03 |
| 67 | GO:0010315: auxin efflux | 3.46E-03 |
| 68 | GO:0006559: L-phenylalanine catabolic process | 3.46E-03 |
| 69 | GO:0006206: pyrimidine nucleobase metabolic process | 3.46E-03 |
| 70 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.46E-03 |
| 71 | GO:0006563: L-serine metabolic process | 3.46E-03 |
| 72 | GO:0010405: arabinogalactan protein metabolic process | 3.46E-03 |
| 73 | GO:0009959: negative gravitropism | 3.46E-03 |
| 74 | GO:0035194: posttranscriptional gene silencing by RNA | 3.46E-03 |
| 75 | GO:0009903: chloroplast avoidance movement | 4.17E-03 |
| 76 | GO:0030488: tRNA methylation | 4.17E-03 |
| 77 | GO:2000037: regulation of stomatal complex patterning | 4.17E-03 |
| 78 | GO:0009742: brassinosteroid mediated signaling pathway | 4.54E-03 |
| 79 | GO:0080167: response to karrikin | 4.60E-03 |
| 80 | GO:0048437: floral organ development | 4.92E-03 |
| 81 | GO:0006821: chloride transport | 4.92E-03 |
| 82 | GO:0010444: guard mother cell differentiation | 4.92E-03 |
| 83 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 4.92E-03 |
| 84 | GO:0010161: red light signaling pathway | 4.92E-03 |
| 85 | GO:0009610: response to symbiotic fungus | 4.92E-03 |
| 86 | GO:0010050: vegetative phase change | 4.92E-03 |
| 87 | GO:0030162: regulation of proteolysis | 5.71E-03 |
| 88 | GO:0048766: root hair initiation | 5.71E-03 |
| 89 | GO:0010439: regulation of glucosinolate biosynthetic process | 5.71E-03 |
| 90 | GO:0001522: pseudouridine synthesis | 5.71E-03 |
| 91 | GO:0009850: auxin metabolic process | 5.71E-03 |
| 92 | GO:0009704: de-etiolation | 5.71E-03 |
| 93 | GO:0032875: regulation of DNA endoreduplication | 5.71E-03 |
| 94 | GO:0009416: response to light stimulus | 5.71E-03 |
| 95 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.55E-03 |
| 96 | GO:0010100: negative regulation of photomorphogenesis | 6.55E-03 |
| 97 | GO:0010099: regulation of photomorphogenesis | 6.55E-03 |
| 98 | GO:0009827: plant-type cell wall modification | 6.55E-03 |
| 99 | GO:0006468: protein phosphorylation | 6.92E-03 |
| 100 | GO:2000024: regulation of leaf development | 7.42E-03 |
| 101 | GO:0006783: heme biosynthetic process | 7.42E-03 |
| 102 | GO:0000902: cell morphogenesis | 7.42E-03 |
| 103 | GO:0009051: pentose-phosphate shunt, oxidative branch | 7.42E-03 |
| 104 | GO:0030154: cell differentiation | 7.52E-03 |
| 105 | GO:0000160: phosphorelay signal transduction system | 7.64E-03 |
| 106 | GO:0040008: regulation of growth | 7.97E-03 |
| 107 | GO:0031425: chloroplast RNA processing | 8.34E-03 |
| 108 | GO:0008202: steroid metabolic process | 8.34E-03 |
| 109 | GO:0009638: phototropism | 8.34E-03 |
| 110 | GO:0035999: tetrahydrofolate interconversion | 8.34E-03 |
| 111 | GO:0030422: production of siRNA involved in RNA interference | 9.30E-03 |
| 112 | GO:0009641: shade avoidance | 9.30E-03 |
| 113 | GO:0009682: induced systemic resistance | 1.03E-02 |
| 114 | GO:0048229: gametophyte development | 1.03E-02 |
| 115 | GO:0010015: root morphogenesis | 1.03E-02 |
| 116 | GO:0006816: calcium ion transport | 1.03E-02 |
| 117 | GO:0015706: nitrate transport | 1.13E-02 |
| 118 | GO:0008361: regulation of cell size | 1.13E-02 |
| 119 | GO:0009785: blue light signaling pathway | 1.24E-02 |
| 120 | GO:0006006: glucose metabolic process | 1.24E-02 |
| 121 | GO:0030036: actin cytoskeleton organization | 1.24E-02 |
| 122 | GO:0010075: regulation of meristem growth | 1.24E-02 |
| 123 | GO:0006541: glutamine metabolic process | 1.35E-02 |
| 124 | GO:0010020: chloroplast fission | 1.35E-02 |
| 125 | GO:0010207: photosystem II assembly | 1.35E-02 |
| 126 | GO:0009934: regulation of meristem structural organization | 1.35E-02 |
| 127 | GO:0010143: cutin biosynthetic process | 1.35E-02 |
| 128 | GO:0010167: response to nitrate | 1.46E-02 |
| 129 | GO:0070588: calcium ion transmembrane transport | 1.46E-02 |
| 130 | GO:0006071: glycerol metabolic process | 1.58E-02 |
| 131 | GO:0009736: cytokinin-activated signaling pathway | 1.61E-02 |
| 132 | GO:0010187: negative regulation of seed germination | 1.70E-02 |
| 133 | GO:0051017: actin filament bundle assembly | 1.70E-02 |
| 134 | GO:0005992: trehalose biosynthetic process | 1.70E-02 |
| 135 | GO:0009723: response to ethylene | 1.78E-02 |
| 136 | GO:0006825: copper ion transport | 1.83E-02 |
| 137 | GO:0006306: DNA methylation | 1.95E-02 |
| 138 | GO:0048316: seed development | 1.97E-02 |
| 139 | GO:0031348: negative regulation of defense response | 2.08E-02 |
| 140 | GO:0009740: gibberellic acid mediated signaling pathway | 2.16E-02 |
| 141 | GO:0009686: gibberellin biosynthetic process | 2.22E-02 |
| 142 | GO:0009625: response to insect | 2.22E-02 |
| 143 | GO:0010227: floral organ abscission | 2.22E-02 |
| 144 | GO:0006351: transcription, DNA-templated | 2.22E-02 |
| 145 | GO:0006284: base-excision repair | 2.35E-02 |
| 146 | GO:0010091: trichome branching | 2.35E-02 |
| 147 | GO:0042127: regulation of cell proliferation | 2.35E-02 |
| 148 | GO:0016117: carotenoid biosynthetic process | 2.49E-02 |
| 149 | GO:0010087: phloem or xylem histogenesis | 2.63E-02 |
| 150 | GO:0048653: anther development | 2.63E-02 |
| 151 | GO:0042631: cellular response to water deprivation | 2.63E-02 |
| 152 | GO:0009958: positive gravitropism | 2.78E-02 |
| 153 | GO:0009741: response to brassinosteroid | 2.78E-02 |
| 154 | GO:0009646: response to absence of light | 2.92E-02 |
| 155 | GO:0009058: biosynthetic process | 3.03E-02 |
| 156 | GO:0009751: response to salicylic acid | 3.10E-02 |
| 157 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.23E-02 |
| 158 | GO:0071554: cell wall organization or biogenesis | 3.23E-02 |
| 159 | GO:0031047: gene silencing by RNA | 3.38E-02 |
| 160 | GO:0032502: developmental process | 3.38E-02 |
| 161 | GO:0009630: gravitropism | 3.38E-02 |
| 162 | GO:0009753: response to jasmonic acid | 3.44E-02 |
| 163 | GO:0016310: phosphorylation | 3.52E-02 |
| 164 | GO:0071281: cellular response to iron ion | 3.54E-02 |
| 165 | GO:0010090: trichome morphogenesis | 3.54E-02 |
| 166 | GO:0006355: regulation of transcription, DNA-templated | 3.66E-02 |
| 167 | GO:0009828: plant-type cell wall loosening | 3.70E-02 |
| 168 | GO:0007267: cell-cell signaling | 3.86E-02 |
| 169 | GO:0009451: RNA modification | 4.05E-02 |
| 170 | GO:0010029: regulation of seed germination | 4.36E-02 |
| 171 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.43E-02 |
| 172 | GO:0009739: response to gibberellin | 4.43E-02 |
| 173 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.46E-02 |
| 174 | GO:0015995: chlorophyll biosynthetic process | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 2 | GO:0004008: copper-exporting ATPase activity | 3.22E-04 |
| 3 | GO:0004071: aspartate-ammonia ligase activity | 3.22E-04 |
| 4 | GO:0010313: phytochrome binding | 3.22E-04 |
| 5 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.22E-04 |
| 6 | GO:0009672: auxin:proton symporter activity | 5.85E-04 |
| 7 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 7.02E-04 |
| 8 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 7.02E-04 |
| 9 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 7.02E-04 |
| 10 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 7.02E-04 |
| 11 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 7.02E-04 |
| 12 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.88E-04 |
| 13 | GO:0010329: auxin efflux transmembrane transporter activity | 1.02E-03 |
| 14 | GO:0045548: phenylalanine ammonia-lyase activity | 1.14E-03 |
| 15 | GO:0032549: ribonucleoside binding | 1.14E-03 |
| 16 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 1.14E-03 |
| 17 | GO:0008469: histone-arginine N-methyltransferase activity | 1.14E-03 |
| 18 | GO:0052722: fatty acid in-chain hydroxylase activity | 1.14E-03 |
| 19 | GO:0004672: protein kinase activity | 1.55E-03 |
| 20 | GO:0005253: anion channel activity | 2.19E-03 |
| 21 | GO:0004845: uracil phosphoribosyltransferase activity | 2.19E-03 |
| 22 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.19E-03 |
| 23 | GO:0004372: glycine hydroxymethyltransferase activity | 2.80E-03 |
| 24 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.80E-03 |
| 25 | GO:0008519: ammonium transmembrane transporter activity | 3.46E-03 |
| 26 | GO:0005247: voltage-gated chloride channel activity | 3.46E-03 |
| 27 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.46E-03 |
| 28 | GO:0004849: uridine kinase activity | 4.17E-03 |
| 29 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.17E-03 |
| 30 | GO:0000156: phosphorelay response regulator activity | 4.38E-03 |
| 31 | GO:0004674: protein serine/threonine kinase activity | 4.65E-03 |
| 32 | GO:0004252: serine-type endopeptidase activity | 6.41E-03 |
| 33 | GO:0005375: copper ion transmembrane transporter activity | 6.55E-03 |
| 34 | GO:0008142: oxysterol binding | 6.55E-03 |
| 35 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 7.42E-03 |
| 36 | GO:0016301: kinase activity | 7.47E-03 |
| 37 | GO:0004805: trehalose-phosphatase activity | 9.30E-03 |
| 38 | GO:0001054: RNA polymerase I activity | 1.03E-02 |
| 39 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.13E-02 |
| 40 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.24E-02 |
| 41 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.24E-02 |
| 42 | GO:0031072: heat shock protein binding | 1.24E-02 |
| 43 | GO:0005262: calcium channel activity | 1.24E-02 |
| 44 | GO:0009982: pseudouridine synthase activity | 1.24E-02 |
| 45 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.35E-02 |
| 46 | GO:0031625: ubiquitin protein ligase binding | 1.79E-02 |
| 47 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.83E-02 |
| 48 | GO:0004176: ATP-dependent peptidase activity | 1.95E-02 |
| 49 | GO:0033612: receptor serine/threonine kinase binding | 1.95E-02 |
| 50 | GO:0004650: polygalacturonase activity | 2.10E-02 |
| 51 | GO:0005215: transporter activity | 2.30E-02 |
| 52 | GO:0003727: single-stranded RNA binding | 2.35E-02 |
| 53 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.43E-02 |
| 54 | GO:0004871: signal transducer activity | 2.58E-02 |
| 55 | GO:0005515: protein binding | 2.62E-02 |
| 56 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.78E-02 |
| 57 | GO:0001085: RNA polymerase II transcription factor binding | 2.78E-02 |
| 58 | GO:0010181: FMN binding | 2.92E-02 |
| 59 | GO:0019901: protein kinase binding | 3.07E-02 |
| 60 | GO:0016491: oxidoreductase activity | 3.08E-02 |
| 61 | GO:0016829: lyase activity | 3.11E-02 |
| 62 | GO:0046983: protein dimerization activity | 3.15E-02 |
| 63 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.45E-02 |
| 64 | GO:0003677: DNA binding | 3.54E-02 |
| 65 | GO:0051015: actin filament binding | 3.54E-02 |
| 66 | GO:0016759: cellulose synthase activity | 3.70E-02 |
| 67 | GO:0016413: O-acetyltransferase activity | 4.03E-02 |
| 68 | GO:0008236: serine-type peptidase activity | 4.88E-02 |