GO Enrichment Analysis of Co-expressed Genes with
AT2G35860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 7 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 8 | GO:0015670: carbon dioxide transport | 0.00E+00 |
| 9 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 10 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 11 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 12 | GO:0010207: photosystem II assembly | 2.15E-06 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 5.27E-06 |
| 14 | GO:0010143: cutin biosynthetic process | 7.33E-05 |
| 15 | GO:0009658: chloroplast organization | 1.24E-04 |
| 16 | GO:0006631: fatty acid metabolic process | 2.21E-04 |
| 17 | GO:0010362: negative regulation of anion channel activity by blue light | 3.14E-04 |
| 18 | GO:0015969: guanosine tetraphosphate metabolic process | 3.14E-04 |
| 19 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 3.14E-04 |
| 20 | GO:0046467: membrane lipid biosynthetic process | 3.14E-04 |
| 21 | GO:0031426: polycistronic mRNA processing | 3.14E-04 |
| 22 | GO:1902025: nitrate import | 3.14E-04 |
| 23 | GO:0015801: aromatic amino acid transport | 3.14E-04 |
| 24 | GO:0043087: regulation of GTPase activity | 3.14E-04 |
| 25 | GO:0071461: cellular response to redox state | 3.14E-04 |
| 26 | GO:0046167: glycerol-3-phosphate biosynthetic process | 3.14E-04 |
| 27 | GO:0043007: maintenance of rDNA | 3.14E-04 |
| 28 | GO:0090548: response to nitrate starvation | 3.14E-04 |
| 29 | GO:1902458: positive regulation of stomatal opening | 3.14E-04 |
| 30 | GO:0016559: peroxisome fission | 3.24E-04 |
| 31 | GO:0042819: vitamin B6 biosynthetic process | 6.87E-04 |
| 32 | GO:0080005: photosystem stoichiometry adjustment | 6.87E-04 |
| 33 | GO:0006650: glycerophospholipid metabolic process | 6.87E-04 |
| 34 | GO:0010541: acropetal auxin transport | 6.87E-04 |
| 35 | GO:0010155: regulation of proton transport | 6.87E-04 |
| 36 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.87E-04 |
| 37 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 6.87E-04 |
| 38 | GO:0015790: UDP-xylose transport | 6.87E-04 |
| 39 | GO:0051262: protein tetramerization | 6.87E-04 |
| 40 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.70E-04 |
| 41 | GO:0046168: glycerol-3-phosphate catabolic process | 1.11E-03 |
| 42 | GO:0010160: formation of animal organ boundary | 1.11E-03 |
| 43 | GO:0044375: regulation of peroxisome size | 1.11E-03 |
| 44 | GO:0046621: negative regulation of organ growth | 1.11E-03 |
| 45 | GO:0009637: response to blue light | 1.28E-03 |
| 46 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.37E-03 |
| 47 | GO:0009152: purine ribonucleotide biosynthetic process | 1.60E-03 |
| 48 | GO:0046653: tetrahydrofolate metabolic process | 1.60E-03 |
| 49 | GO:0010239: chloroplast mRNA processing | 1.60E-03 |
| 50 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.60E-03 |
| 51 | GO:0006072: glycerol-3-phosphate metabolic process | 1.60E-03 |
| 52 | GO:0008615: pyridoxine biosynthetic process | 1.60E-03 |
| 53 | GO:1990019: protein storage vacuole organization | 1.60E-03 |
| 54 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.60E-03 |
| 55 | GO:2001141: regulation of RNA biosynthetic process | 1.60E-03 |
| 56 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.60E-03 |
| 57 | GO:0055114: oxidation-reduction process | 1.77E-03 |
| 58 | GO:2000306: positive regulation of photomorphogenesis | 2.14E-03 |
| 59 | GO:0015994: chlorophyll metabolic process | 2.14E-03 |
| 60 | GO:0006021: inositol biosynthetic process | 2.14E-03 |
| 61 | GO:0032366: intracellular sterol transport | 2.14E-03 |
| 62 | GO:0019722: calcium-mediated signaling | 2.39E-03 |
| 63 | GO:0006465: signal peptide processing | 2.74E-03 |
| 64 | GO:0009904: chloroplast accumulation movement | 2.74E-03 |
| 65 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.74E-03 |
| 66 | GO:0009107: lipoate biosynthetic process | 2.74E-03 |
| 67 | GO:0006857: oligopeptide transport | 2.80E-03 |
| 68 | GO:0045489: pectin biosynthetic process | 3.01E-03 |
| 69 | GO:0006520: cellular amino acid metabolic process | 3.01E-03 |
| 70 | GO:0045962: positive regulation of development, heterochronic | 3.38E-03 |
| 71 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.38E-03 |
| 72 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.38E-03 |
| 73 | GO:0060918: auxin transport | 3.38E-03 |
| 74 | GO:0009228: thiamine biosynthetic process | 3.38E-03 |
| 75 | GO:0046855: inositol phosphate dephosphorylation | 3.38E-03 |
| 76 | GO:0042549: photosystem II stabilization | 3.38E-03 |
| 77 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.38E-03 |
| 78 | GO:0009791: post-embryonic development | 3.47E-03 |
| 79 | GO:0032502: developmental process | 3.97E-03 |
| 80 | GO:0009903: chloroplast avoidance movement | 4.06E-03 |
| 81 | GO:0006810: transport | 4.30E-03 |
| 82 | GO:0007267: cell-cell signaling | 4.79E-03 |
| 83 | GO:1900056: negative regulation of leaf senescence | 4.80E-03 |
| 84 | GO:0048437: floral organ development | 4.80E-03 |
| 85 | GO:0050829: defense response to Gram-negative bacterium | 4.80E-03 |
| 86 | GO:0048564: photosystem I assembly | 5.57E-03 |
| 87 | GO:0042255: ribosome assembly | 5.57E-03 |
| 88 | GO:0006353: DNA-templated transcription, termination | 5.57E-03 |
| 89 | GO:0009690: cytokinin metabolic process | 5.57E-03 |
| 90 | GO:2000070: regulation of response to water deprivation | 5.57E-03 |
| 91 | GO:0071482: cellular response to light stimulus | 6.39E-03 |
| 92 | GO:0015996: chlorophyll catabolic process | 6.39E-03 |
| 93 | GO:0007186: G-protein coupled receptor signaling pathway | 6.39E-03 |
| 94 | GO:0009657: plastid organization | 6.39E-03 |
| 95 | GO:0009932: cell tip growth | 6.39E-03 |
| 96 | GO:0006633: fatty acid biosynthetic process | 7.18E-03 |
| 97 | GO:0006098: pentose-phosphate shunt | 7.24E-03 |
| 98 | GO:0051865: protein autoubiquitination | 7.24E-03 |
| 99 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 7.24E-03 |
| 100 | GO:0048507: meristem development | 7.24E-03 |
| 101 | GO:0006811: ion transport | 7.74E-03 |
| 102 | GO:0009638: phototropism | 8.14E-03 |
| 103 | GO:0010380: regulation of chlorophyll biosynthetic process | 8.14E-03 |
| 104 | GO:0043069: negative regulation of programmed cell death | 9.07E-03 |
| 105 | GO:0009641: shade avoidance | 9.07E-03 |
| 106 | GO:0010215: cellulose microfibril organization | 9.07E-03 |
| 107 | GO:0009773: photosynthetic electron transport in photosystem I | 1.00E-02 |
| 108 | GO:0006352: DNA-templated transcription, initiation | 1.00E-02 |
| 109 | GO:0016485: protein processing | 1.00E-02 |
| 110 | GO:0008361: regulation of cell size | 1.11E-02 |
| 111 | GO:0006790: sulfur compound metabolic process | 1.11E-02 |
| 112 | GO:0045037: protein import into chloroplast stroma | 1.11E-02 |
| 113 | GO:0042546: cell wall biogenesis | 1.20E-02 |
| 114 | GO:0030048: actin filament-based movement | 1.21E-02 |
| 115 | GO:0009785: blue light signaling pathway | 1.21E-02 |
| 116 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.21E-02 |
| 117 | GO:0009725: response to hormone | 1.21E-02 |
| 118 | GO:0006094: gluconeogenesis | 1.21E-02 |
| 119 | GO:0009767: photosynthetic electron transport chain | 1.21E-02 |
| 120 | GO:0034605: cellular response to heat | 1.32E-02 |
| 121 | GO:0010020: chloroplast fission | 1.32E-02 |
| 122 | GO:0010223: secondary shoot formation | 1.32E-02 |
| 123 | GO:0009887: animal organ morphogenesis | 1.32E-02 |
| 124 | GO:0010540: basipetal auxin transport | 1.32E-02 |
| 125 | GO:0009266: response to temperature stimulus | 1.32E-02 |
| 126 | GO:0007031: peroxisome organization | 1.43E-02 |
| 127 | GO:0042343: indole glucosinolate metabolic process | 1.43E-02 |
| 128 | GO:0009825: multidimensional cell growth | 1.43E-02 |
| 129 | GO:0019853: L-ascorbic acid biosynthetic process | 1.43E-02 |
| 130 | GO:0046854: phosphatidylinositol phosphorylation | 1.43E-02 |
| 131 | GO:0010025: wax biosynthetic process | 1.54E-02 |
| 132 | GO:0006833: water transport | 1.54E-02 |
| 133 | GO:0071555: cell wall organization | 1.82E-02 |
| 134 | GO:0006306: DNA methylation | 1.91E-02 |
| 135 | GO:0016114: terpenoid biosynthetic process | 1.91E-02 |
| 136 | GO:0003333: amino acid transmembrane transport | 1.91E-02 |
| 137 | GO:0098542: defense response to other organism | 1.91E-02 |
| 138 | GO:0016226: iron-sulfur cluster assembly | 2.03E-02 |
| 139 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.03E-02 |
| 140 | GO:0080092: regulation of pollen tube growth | 2.03E-02 |
| 141 | GO:0019748: secondary metabolic process | 2.03E-02 |
| 142 | GO:0044550: secondary metabolite biosynthetic process | 2.06E-02 |
| 143 | GO:0009294: DNA mediated transformation | 2.16E-02 |
| 144 | GO:0048443: stamen development | 2.29E-02 |
| 145 | GO:0006817: phosphate ion transport | 2.29E-02 |
| 146 | GO:0009306: protein secretion | 2.29E-02 |
| 147 | GO:0042335: cuticle development | 2.57E-02 |
| 148 | GO:0034220: ion transmembrane transport | 2.57E-02 |
| 149 | GO:0009958: positive gravitropism | 2.71E-02 |
| 150 | GO:0010182: sugar mediated signaling pathway | 2.71E-02 |
| 151 | GO:0009741: response to brassinosteroid | 2.71E-02 |
| 152 | GO:0009646: response to absence of light | 2.85E-02 |
| 153 | GO:0010183: pollen tube guidance | 3.00E-02 |
| 154 | GO:0008654: phospholipid biosynthetic process | 3.00E-02 |
| 155 | GO:0007264: small GTPase mediated signal transduction | 3.30E-02 |
| 156 | GO:0030163: protein catabolic process | 3.45E-02 |
| 157 | GO:0009639: response to red or far red light | 3.61E-02 |
| 158 | GO:0007623: circadian rhythm | 3.83E-02 |
| 159 | GO:0010027: thylakoid membrane organization | 4.09E-02 |
| 160 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 4.25E-02 |
| 161 | GO:0042128: nitrate assimilation | 4.42E-02 |
| 162 | GO:0010411: xyloglucan metabolic process | 4.59E-02 |
| 163 | GO:0016311: dephosphorylation | 4.76E-02 |
| 164 | GO:0018298: protein-chromophore linkage | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0036033: mediator complex binding | 0.00E+00 |
| 7 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0016491: oxidoreductase activity | 8.79E-05 |
| 9 | GO:0000293: ferric-chelate reductase activity | 1.45E-04 |
| 10 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.45E-04 |
| 11 | GO:0005227: calcium activated cation channel activity | 3.14E-04 |
| 12 | GO:0080132: fatty acid alpha-hydroxylase activity | 3.14E-04 |
| 13 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 3.14E-04 |
| 14 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 3.14E-04 |
| 15 | GO:0004328: formamidase activity | 3.14E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.14E-04 |
| 17 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 3.14E-04 |
| 18 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 6.87E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.87E-04 |
| 20 | GO:0015173: aromatic amino acid transmembrane transporter activity | 6.87E-04 |
| 21 | GO:0018708: thiol S-methyltransferase activity | 6.87E-04 |
| 22 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.87E-04 |
| 23 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.87E-04 |
| 24 | GO:0005464: UDP-xylose transmembrane transporter activity | 6.87E-04 |
| 25 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 6.87E-04 |
| 26 | GO:0048531: beta-1,3-galactosyltransferase activity | 6.87E-04 |
| 27 | GO:0008728: GTP diphosphokinase activity | 6.87E-04 |
| 28 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 6.87E-04 |
| 29 | GO:0042389: omega-3 fatty acid desaturase activity | 6.87E-04 |
| 30 | GO:0004565: beta-galactosidase activity | 9.84E-04 |
| 31 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.11E-03 |
| 32 | GO:0050734: hydroxycinnamoyltransferase activity | 1.11E-03 |
| 33 | GO:0016992: lipoate synthase activity | 1.11E-03 |
| 34 | GO:0032947: protein complex scaffold | 1.11E-03 |
| 35 | GO:0005504: fatty acid binding | 1.11E-03 |
| 36 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.11E-03 |
| 37 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.11E-03 |
| 38 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.11E-03 |
| 39 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.11E-03 |
| 40 | GO:0048027: mRNA 5'-UTR binding | 1.60E-03 |
| 41 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.60E-03 |
| 42 | GO:0009882: blue light photoreceptor activity | 1.60E-03 |
| 43 | GO:0016987: sigma factor activity | 2.14E-03 |
| 44 | GO:0045430: chalcone isomerase activity | 2.14E-03 |
| 45 | GO:0042277: peptide binding | 2.14E-03 |
| 46 | GO:0001053: plastid sigma factor activity | 2.14E-03 |
| 47 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.14E-03 |
| 48 | GO:0003727: single-stranded RNA binding | 2.39E-03 |
| 49 | GO:0005275: amine transmembrane transporter activity | 2.74E-03 |
| 50 | GO:0004332: fructose-bisphosphate aldolase activity | 3.38E-03 |
| 51 | GO:0035673: oligopeptide transmembrane transporter activity | 3.38E-03 |
| 52 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.38E-03 |
| 53 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 3.38E-03 |
| 54 | GO:0048038: quinone binding | 3.72E-03 |
| 55 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.06E-03 |
| 56 | GO:0102391: decanoate--CoA ligase activity | 4.06E-03 |
| 57 | GO:0051753: mannan synthase activity | 4.06E-03 |
| 58 | GO:0005261: cation channel activity | 4.06E-03 |
| 59 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 4.06E-03 |
| 60 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.80E-03 |
| 61 | GO:0005506: iron ion binding | 5.76E-03 |
| 62 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 6.39E-03 |
| 63 | GO:0008135: translation factor activity, RNA binding | 6.39E-03 |
| 64 | GO:0005215: transporter activity | 7.23E-03 |
| 65 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.00E-02 |
| 66 | GO:0042802: identical protein binding | 1.10E-02 |
| 67 | GO:0015198: oligopeptide transporter activity | 1.11E-02 |
| 68 | GO:0010329: auxin efflux transmembrane transporter activity | 1.21E-02 |
| 69 | GO:0008081: phosphoric diester hydrolase activity | 1.21E-02 |
| 70 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.21E-02 |
| 71 | GO:0031072: heat shock protein binding | 1.21E-02 |
| 72 | GO:0000155: phosphorelay sensor kinase activity | 1.21E-02 |
| 73 | GO:0035091: phosphatidylinositol binding | 1.25E-02 |
| 74 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.25E-02 |
| 75 | GO:0031624: ubiquitin conjugating enzyme binding | 1.32E-02 |
| 76 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.32E-02 |
| 77 | GO:0003774: motor activity | 1.32E-02 |
| 78 | GO:0008146: sulfotransferase activity | 1.43E-02 |
| 79 | GO:0003690: double-stranded DNA binding | 1.61E-02 |
| 80 | GO:0051536: iron-sulfur cluster binding | 1.66E-02 |
| 81 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.90E-02 |
| 82 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.03E-02 |
| 83 | GO:0052689: carboxylic ester hydrolase activity | 2.10E-02 |
| 84 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.56E-02 |
| 85 | GO:0008080: N-acetyltransferase activity | 2.71E-02 |
| 86 | GO:0010181: FMN binding | 2.85E-02 |
| 87 | GO:0004872: receptor activity | 3.00E-02 |
| 88 | GO:0003924: GTPase activity | 3.02E-02 |
| 89 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.15E-02 |
| 90 | GO:0004518: nuclease activity | 3.30E-02 |
| 91 | GO:0046910: pectinesterase inhibitor activity | 3.57E-02 |
| 92 | GO:0016791: phosphatase activity | 3.61E-02 |
| 93 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.77E-02 |
| 94 | GO:0005525: GTP binding | 3.90E-02 |
| 95 | GO:0015250: water channel activity | 4.09E-02 |
| 96 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.59E-02 |
| 97 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.84E-02 |